RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 TBC1D32Q96NH3 1257 aa7.57□□□□□ -1.2
LMBR1-218ENST00000486837 SLC9A7Q96T83 725 aa7.57□□□□□ -1.2
LMBR1-218ENST00000486837 KIF2CQ99661 725 aa7.57□□□□□ -1.2
LMBR1-218ENST00000486837 MIPEPQ99797 713 aa7.57□□□□□ -1.2
LMBR1-218ENST00000486837 CEP131Q9UPN4 1083 aa7.57□□□□□ -1.2
LMBR1-218ENST00000486837 IGSF3O75054 1194 aa7.56□□□□□ -1.2
LMBR1-218ENST00000486837 SLITRK5O94991 958 aa7.56□□□□□ -1.2
LMBR1-218ENST00000486837 ETV3P41162 512 aa7.56□□□□□ -1.2
LMBR1-218ENST00000486837 CYP27A1Q02318 531 aa7.56□□□□□ -1.2
LMBR1-218ENST00000486837 NKAPLQ5M9Q1 402 aa7.56□□□□□ -1.2
LMBR1-218ENST00000486837 UNC5AQ6ZN44 842 aa7.56□□□□□ -1.2
LMBR1-218ENST00000486837 TTC6Q86TZ1 520 aa7.56□□□□□ -1.2
LMBR1-218ENST00000486837 TOP6BLQ8N6T0 577 aa7.56□□□□□ -1.2
LMBR1-218ENST00000486837 DNAJB8Q8NHS0 232 aa7.56□□□□□ -1.2
LMBR1-218ENST00000486837 PPP1R13LQ8WUF5 828 aa7.56□□□□□ -1.2
LMBR1-218ENST00000486837 DUSP23Q9BVJ7 150 aa7.56□□□□□ -1.2
LMBR1-218ENST00000486837 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.56□□□□□ -1.22e-8■■■■□ 19.8
LMBR1-218ENST00000486837 UBOX5O94941 541 aa7.55□□□□□ -1.2
LMBR1-218ENST00000486837 NFIAQ12857 509 aa7.55□□□□□ -1.2
LMBR1-218ENST00000486837 RAB33AQ14088 237 aa7.55□□□□□ -1.2
LMBR1-218ENST00000486837 PPP2R5EQ16537 467 aa7.55□□□□□ -1.2
LMBR1-218ENST00000486837 RSPO4Q2I0M5 234 aaPredicted RBP7.55□□□□□ -1.2
LMBR1-218ENST00000486837 CYP27C1Q4G0S4 372 aa7.55□□□□□ -1.2
LMBR1-218ENST00000486837 BAHD1Q8TBE0 780 aaPredicted RBP7.55□□□□□ -1.2
LMBR1-218ENST00000486837 HNRNPLLQ8WVV9 542 aaKnown RBP7.55□□□□□ -1.2
LMBR1-218ENST00000486837 COX4I2Q96KJ9 171 aa7.55□□□□□ -1.2
LMBR1-218ENST00000486837 DHRS1Q96LJ7 313 aa7.55□□□□□ -1.2
LMBR1-218ENST00000486837 DNAJC2Q99543 621 aaKnown RBP7.55□□□□□ -1.2
LMBR1-218ENST00000486837 DBNDD2Q9BQY9 259 aa7.55□□□□□ -1.2
LMBR1-218ENST00000486837 PHAXQ9H814 394 aaKnown RBP7.55□□□□□ -1.2
LMBR1-218ENST00000486837 EOMESO95936 686 aa7.54□□□□□ -1.2
LMBR1-218ENST00000486837 IGLV1-40P01703 118 aa7.54□□□□□ -1.2
LMBR1-218ENST00000486837 FAM87AP0C7U9 286 aa7.54□□□□□ -1.2
LMBR1-218ENST00000486837 CYP7A1P22680 504 aa7.54□□□□□ -1.2
LMBR1-218ENST00000486837 POLR2BP30876 1174 aaKnown RBP7.54□□□□□ -1.2
LMBR1-218ENST00000486837 ADMP35318 185 aa7.54□□□□□ -1.2
LMBR1-218ENST00000486837 CPSF6Q16630 551 aaKnown RBP eCLIP7.54□□□□□ -1.2
LMBR1-218ENST00000486837 GPAT2Q6NUI2 795 aa7.54□□□□□ -1.2
LMBR1-218ENST00000486837 METTL22Q9BUU2 404 aaPredicted RBP7.54□□□□□ -1.2
LMBR1-218ENST00000486837 TRIM55Q9BYV6 548 aa7.54□□□□□ -1.2
LMBR1-218ENST00000486837 TNKS2Q9H2K2 1166 aa7.54□□□□□ -1.2
LMBR1-218ENST00000486837 LEFTY1O75610 366 aa7.53□□□□□ -1.2
LMBR1-218ENST00000486837 FSTP19883 344 aa7.53□□□□□ -1.2
LMBR1-218ENST00000486837 CHMP4BP1P59074 171 aa7.53□□□□□ -1.2
LMBR1-218ENST00000486837 ZYXQ15942 572 aaKnown RBP7.53□□□□□ -1.2
LMBR1-218ENST00000486837 FXNQ16595 210 aa7.53□□□□□ -1.2
LMBR1-218ENST00000486837 RIN3Q8TB24 985 aa7.53□□□□□ -1.2
LMBR1-218ENST00000486837 MFSD14AQ96MC6 490 aa7.53□□□□□ -1.2
LMBR1-218ENST00000486837 SIRPGQ9P1W8 387 aa7.53□□□□□ -1.2
LMBR1-218ENST00000486837 SUCOQ9UBS9 1254 aaKnown RBP7.53□□□□□ -1.2
LMBR1-218ENST00000486837 GTF2IRD1Q9UHL9 959 aa7.53□□□□□ -1.2
LMBR1-218ENST00000486837 MAPK8IP1Q9UQF2 711 aa7.53□□□□□ -1.2
LMBR1-218ENST00000486837 LTBP3Q9NS15 1303 aa7.52□□□□□ -1.2
LMBR1-218ENST00000486837 IGF2BP3O00425 579 aaKnown RBP eCLIP7.52□□□□□ -1.21
LMBR1-218ENST00000486837 U2SURPO15042 1029 aaKnown RBP7.52□□□□□ -1.21
LMBR1-218ENST00000486837 DYRK3O43781 588 aa7.52□□□□□ -1.21
LMBR1-218ENST00000486837 CLEC3AO75596 197 aa7.52□□□□□ -1.21
LMBR1-218ENST00000486837 F13BP05160 661 aa7.52□□□□□ -1.21
LMBR1-218ENST00000486837 PMS1P54277 932 aaKnown RBP7.52□□□□□ -1.21
LMBR1-218ENST00000486837 RNF4P78317 190 aa7.52□□□□□ -1.21
LMBR1-218ENST00000486837 BBS9Q3SYG4 887 aa7.52□□□□□ -1.21
LMBR1-218ENST00000486837 DUSP27Q5VZP5 1158 aa7.52□□□□□ -1.21
LMBR1-218ENST00000486837 FAM214BQ7L5A3 538 aa7.52□□□□□ -1.21
LMBR1-218ENST00000486837 CDH24Q86UP0 819 aa7.52□□□□□ -1.21
LMBR1-218ENST00000486837 TMEM192Q8IY95 271 aa7.52□□□□□ -1.21
LMBR1-218ENST00000486837 RNF141Q8WVD5 230 aa7.52□□□□□ -1.21
LMBR1-218ENST00000486837 SMARCC1Q92922 1105 aaPredicted RBP7.52□□□□□ -1.21
LMBR1-218ENST00000486837 SLC6A18Q96N87 628 aa7.52□□□□□ -1.21
LMBR1-218ENST00000486837 PRDM5Q9NQX1 630 aaPredicted RBP7.52□□□□□ -1.21
LMBR1-218ENST00000486837 ZNF214Q9UL59 606 aaPredicted RBP7.52□□□□□ -1.21
LMBR1-218ENST00000486837 TPX2Q9ULW0 747 aaKnown RBP7.52□□□□□ -1.21
LMBR1-218ENST00000486837 COL17A1Q9UMD9 1497 aaPredicted RBP7.51□□□□□ -1.21
LMBR1-218ENST00000486837 FAM170BA6NMN3 283 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 SERINC3Q13530 473 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 C22orf34Q6ZV56 151 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 FBXL6Q8N531 539 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 SHKBP1Q8TBC3 707 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 PMFBP1Q8TBY8 1022 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 MKL1Q969V6 931 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 VWCEQ96DN2 955 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 FBXL18Q96ME1 805 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 KREMEN1Q96MU8 473 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 ASPNQ9BXN1 380 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 LNPKQ9C0E8 428 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 ATG3Q9NT62 314 aa7.51□□□□□ -1.21
LMBR1-218ENST00000486837 KIR3DL1P43629 444 aa7.5□□□□□ -1.21
LMBR1-218ENST00000486837 NCAPHQ15003 741 aa7.5□□□□□ -1.21
LMBR1-218ENST00000486837 DDR2Q16832 855 aa7.5□□□□□ -1.21
LMBR1-218ENST00000486837 SFRP5Q5T4F7 317 aa7.5□□□□□ -1.21
LMBR1-218ENST00000486837 NBPF12Q5TAG4 269 aaPredicted RBP7.5□□□□□ -1.21
LMBR1-218ENST00000486837 LARP1BQ659C4 914 aaKnown RBP7.5□□□□□ -1.21
LMBR1-218ENST00000486837 ZNF765Q7L2R6 523 aa7.5□□□□□ -1.21
LMBR1-218ENST00000486837 OSBPL1AQ9BXW6 950 aa7.5□□□□□ -1.21
LMBR1-218ENST00000486837 OSBPL2Q9H1P3 480 aa7.5□□□□□ -1.21
LMBR1-218ENST00000486837 FAM86C2PA6NEL3 165 aa7.49□□□□□ -1.21
LMBR1-218ENST00000486837 SLC7A5Q01650 507 aa7.49□□□□□ -1.21
LMBR1-218ENST00000486837 VHLLQ6RSH7 139 aa7.49□□□□□ -1.21
LMBR1-218ENST00000486837 SHISA5Q8N114 240 aa7.49□□□□□ -1.21
LMBR1-218ENST00000486837 CELF2-AS1Q8N7Q2 184 aa7.49□□□□□ -1.21
LMBR1-218ENST00000486837 MKNK2Q9HBH9 465 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms