RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 PXDNLA1KZ92 1463 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 MAGEB6P1A0A0J9YX57 407 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 CCDC196A0A1B0GTZ2 297 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 FDPSP14324 419 aaKnown RBP13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 KIF23Q02241 960 aaPredicted RBP13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 ANKRD18AQ8IVF6 992 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 LCORLQ8N3X6 602 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 MAP3K15Q6ZN16 1313 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 A0A1W2PQ27 194 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 A0A1W2PQ64 194 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 A0A1W2PQD8 194 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 SSBP05455 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 CDC25AP30304 524 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 RASGRF1Q13972 1273 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 CCDC181Q5TID7 509 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 RRAGBQ5VZM2 374 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 AMOTL1Q8IY63 956 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 RIN2Q8WYP3 895 aaPredicted RBP13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 LPIN2Q92539 896 aa13.94□□□□□ -0.18
SHROOM3-208ENST00000486758 C1orf167Q5SNV9 1468 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 MACROD2A1Z1Q3 448 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 CASP14P31944 242 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 SMARCC2Q8TAQ2 1214 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 AFAP1L1Q8TED9 768 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 TAB2Q9NYJ8 693 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 SRGAP1Q7Z6B7 1085 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 ESR2Q92731 530 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 BLZF1Q9H2G9 400 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 MRPL44Q9H9J2 332 aaKnown RBP13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 PCNTO95613 3336 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 NEDD4P46934 1319 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 SHTN1A0MZ66 631 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 TEX33O43247 280 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 ADD2P35612 726 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 DYNLL1P63167 89 aaKnown RBP13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 RBL2Q08999 1139 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 NAPGQ99747 312 aaPredicted RBP13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 KRT23Q9C075 422 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 ATG3Q9NT62 314 aa13.93□□□□□ -0.18
SHROOM3-208ENST00000486758 F8W031 263 aaPredicted RBP13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 RDXP35241 583 aaKnown RBP13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 USPL1Q5W0Q7 1092 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 SRLQ86TD4 932 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 ZHX3Q9H4I2 956 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 RNF41Q9H4P4 317 aaPredicted RBP13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 CTNND2Q9UQB3 1225 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 JRKLQ9Y4A0 524 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 A0A0U1RQJ8 604 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 CCDC151A5D8V7 595 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 CCT5P48643 541 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 PDE4BQ07343 736 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 AKNAD1Q5T1N1 836 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 REXO1L1PQ8IX06 675 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 ATRIPQ8WXE1 791 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 MROH7-TTC4A0A0A0MT08 1334 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 NCAPD2Q15021 1401 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 GUCY1A2P33402 732 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 EXOSC10Q01780 885 aaKnown RBP13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 CASP8Q14790 479 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 SLC39A14Q15043 492 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 NBPF5PQ86XG9 351 aaPredicted RBP13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 EXOC4Q96A65 974 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 POLR3EQ9NVU0 708 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 MCM9Q9NXL9 1143 aa13.92□□□□□ -0.18
SHROOM3-208ENST00000486758 PIK3C2AO00443 1686 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 TRIM75PA6NK02 468 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 STX10O60499 249 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 KRT9P35527 623 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 BRD3Q15059 726 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 ZNHIT6Q9NWK9 470 aaKnown RBP13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 UTYO14607 1347 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 EIF3CLB5ME19 914 aaKnown RBP13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 PRR29P0C7W0 189 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 ANTXR2P58335 489 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 CCDC122Q5T0U0 273 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 SUSD4Q5VX71 490 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 SEPT12Q8IYM1 358 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 EIF3CQ99613 913 aaKnown RBP13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 SAMM50Q9Y512 469 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 MRFAP1Q9Y605 127 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 USP17L12C9JPN9 530 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 USP17L21D6R901 530 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 EBAG9O00559 213 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 SRGAP2O75044 1071 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 VSNL1P62760 191 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 MAP9Q49MG5 647 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 PIK3AP1Q6ZUJ8 805 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 CARD10Q9BWT7 1032 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 MAGEC2Q9UBF1 373 aaPredicted RBP13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 SAP30BPQ9UHR5 308 aaKnown RBP13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 CDC23Q9UJX2 597 aa13.91□□□□□ -0.18
SHROOM3-208ENST00000486758 LOC102724159A0A0B4J2E5 919 aa13.9□□□□□ -0.18
SHROOM3-208ENST00000486758 RNF40O75150 1001 aa13.9□□□□□ -0.18
SHROOM3-208ENST00000486758 ZPR1O75312 459 aa13.9□□□□□ -0.18
SHROOM3-208ENST00000486758 UBXN1Q04323 297 aa13.9□□□□□ -0.18
SHROOM3-208ENST00000486758 PWP2Q15269 919 aaKnown RBP13.9□□□□□ -0.18
SHROOM3-208ENST00000486758 TRIM65Q6PJ69 517 aa13.9□□□□□ -0.18
SHROOM3-208ENST00000486758 SHC4Q6S5L8 630 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms