RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 KANK3Q6NY19 840 aa12□□□□□ -0.49
CCDC171-208ENST00000486641 LMBR1LQ6UX01 489 aa12□□□□□ -0.49
CCDC171-208ENST00000486641 CYB5R4Q7L1T6 521 aa12□□□□□ -0.49
CCDC171-208ENST00000486641 ANKRD18AQ8IVF6 992 aa12□□□□□ -0.49
CCDC171-208ENST00000486641 NOSTRINQ8IVI9 506 aa12□□□□□ -0.49
CCDC171-208ENST00000486641 OTUD6BQ8N6M0 293 aa12□□□□□ -0.49
CCDC171-208ENST00000486641 AENQ8WTP8 325 aaKnown RBP12□□□□□ -0.49
CCDC171-208ENST00000486641 IP6K1Q92551 441 aa12□□□□□ -0.49
CCDC171-208ENST00000486641 RRP36Q96EU6 259 aaKnown RBP12□□□□□ -0.49
CCDC171-208ENST00000486641 GNL3LQ9NVN8 582 aaKnown RBP12□□□□□ -0.49
CCDC171-208ENST00000486641 PPP1R3GB7ZBB8 358 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 H0YHG0 523 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 PDE2AO00408 941 aaPredicted RBP11.99□□□□□ -0.49
CCDC171-208ENST00000486641 ZNF185O15231 689 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 FSBPO95073 299 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 A1BGP04217 495 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 KRT9P35527 623 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 FKBP4Q02790 459 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC171-208ENST00000486641 ANKRD13DQ6ZTN6 518 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 ZKSCAN4Q969J2 545 aaPredicted RBP11.99□□□□□ -0.49
CCDC171-208ENST00000486641 RPGRIP1Q96KN7 1286 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 VPS16Q9H269 839 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 ANGEL1Q9UNK9 670 aaKnown RBP11.99□□□□□ -0.49
CCDC171-208ENST00000486641 UBN2Q6ZU65 1347 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 ECM29Q5VYK3 1845 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 GOLGA8KD6RF30 607 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 ATP5J2-PTCD1G3V325 749 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 NDUFAB1O14561 156 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 SEMA3EO15041 775 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 N4BP3O15049 544 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 PTCD1O75127 700 aaKnown RBP11.99□□□□□ -0.49
CCDC171-208ENST00000486641 SCP2P22307 547 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 KRT31Q15323 416 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 B4GALNT4Q76KP1 1039 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 SND1Q7KZF4 910 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC171-208ENST00000486641 MICU3Q86XE3 530 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 STAG1Q8WVM7 1258 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 JAKMIP2Q96AA8 810 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 CSRNP2Q9H175 543 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 HAUS4Q9H6D7 363 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 FAM184BQ9ULE4 1060 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 PCDHB6Q9Y5E3 794 aa11.99□□□□□ -0.49
CCDC171-208ENST00000486641 WDR19Q8NEZ3 1342 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 RGPD2P0DJD1 1756 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 A0A087WZG4 1122 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 CCDC189A1A4V9 331 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 MEFVO15553 781 aaPredicted RBP11.98□□□□□ -0.49
CCDC171-208ENST00000486641 C21orf2O43822 256 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 PIP4K2AP48426 406 aaPredicted RBP11.98□□□□□ -0.49
CCDC171-208ENST00000486641 TDO2P48775 406 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 C2orf54Q08AI8 447 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 APOA5Q6Q788 366 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 C14orf37Q86TY3 774 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 AMOTL1Q8IY63 956 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 ZNF579Q8NAF0 562 aaKnown RBP11.98□□□□□ -0.49
CCDC171-208ENST00000486641 GIMAP7Q8NHV1 300 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 ARL8AQ96BM9 186 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 PUS7LQ9H0K6 701 aaKnown RBP11.98□□□□□ -0.49
CCDC171-208ENST00000486641 FAM217BQ9NTX9 383 aaPredicted RBP11.98□□□□□ -0.49
CCDC171-208ENST00000486641 PXDNQ92626 1479 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 ATXN2Q99700 1313 aaKnown RBP11.98□□□□□ -0.49
CCDC171-208ENST00000486641 A0A087X0B3 334 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 SH2B2O14492 632 aaPredicted RBP11.98□□□□□ -0.49
CCDC171-208ENST00000486641 KIAA0754O94854 1291 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 HERVK_113P62684 666 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 SKOR1P84550 965 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 CKAP4Q07065 602 aaKnown RBP11.98□□□□□ -0.49
CCDC171-208ENST00000486641 DPYDQ12882 1025 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 PDCLQ13371 301 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 SLC39A6Q13433 755 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 TTMPQ5BVD1 217 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 CCDC122Q5T0U0 273 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 MYL10Q9BUA6 226 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 KCNJ14Q9UNX9 436 aa11.98□□□□□ -0.49
CCDC171-208ENST00000486641 SRPRBQ9Y5M8 271 aaKnown RBP11.98□□□□□ -0.49
CCDC171-208ENST00000486641 WDR17Q8IZU2 1322 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 LRRC10BA6NIK2 292 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 EZH2Q15910 746 aaKnown RBP11.97□□□□□ -0.49
CCDC171-208ENST00000486641 CAGE1Q8TC20 777 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 HDAC7Q8WUI4 952 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 SLC26A6Q9BXS9 759 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 LIMA1Q9UHB6 759 aaKnown RBP11.97□□□□□ -0.49
CCDC171-208ENST00000486641 MCM8Q9UJA3 840 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 CTNND2Q9UQB3 1225 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 MST1RQ04912 1400 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 LTN1O94822 1766 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 CHUKO15111 745 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 OPA1O60313 960 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 GUCY1A2P33402 732 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 COPB1P53618 953 aaKnown RBP11.97□□□□□ -0.49
CCDC171-208ENST00000486641 CASP7P55210 303 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 AMOTQ4VCS5 1084 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 LRRC24Q50LG9 513 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 DIS3L2Q8IYB7 885 aaKnown RBP11.97□□□□□ -0.49
CCDC171-208ENST00000486641 PAGE5Q96GU1 130 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 TACO1Q9BSH4 297 aaKnown RBP11.97□□□□□ -0.49
CCDC171-208ENST00000486641 GPR108Q9NPR9 543 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 TAB2Q9NYJ8 693 aa11.97□□□□□ -0.49
CCDC171-208ENST00000486641 ZBTB43O43298 467 aa11.96□□□□□ -0.49
CCDC171-208ENST00000486641 MMP1P03956 469 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms