RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 TMEM63CQ9P1W3 806 aa25.09■■□□□ 1.61
TRADD-202ENST00000486556 PPP1R1BQ9UD71 204 aaPredicted RBP25.09■■□□□ 1.61
TRADD-202ENST00000486556 ECM29Q5VYK3 1845 aa25.08■■□□□ 1.61
TRADD-202ENST00000486556 XBP1P17861 261 aa25.08■■□□□ 1.61
TRADD-202ENST00000486556 GNAQP50148 359 aa25.08■■□□□ 1.61
TRADD-202ENST00000486556 ZNF445P59923 1031 aa25.08■■□□□ 1.61
TRADD-202ENST00000486556 ZSCAN23Q3MJ62 389 aa25.08■■□□□ 1.61
TRADD-202ENST00000486556 CMTR1Q8N1G2 835 aaKnown RBP25.08■■□□□ 1.61
TRADD-202ENST00000486556 PLIN4Q96Q06 1357 aa25.08■■□□□ 1.6
TRADD-202ENST00000486556 GOLGA6L3A6NEY3 463 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 RAD17O75943 681 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 GUCY1A2P33402 732 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 OGFOD1Q8N543 542 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 AGBL3Q8NEM8 1001 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 TMEM47Q9BQJ4 181 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 RBM27Q9P2N5 1060 aaKnown RBP25.07■■□□□ 1.6
TRADD-202ENST00000486556 STX8Q9UNK0 236 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 FSD2A1L4K1 749 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 GOLGA6L4A6NEF3 574 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 U2AF2P26368 475 aaKnown RBP eCLIP25.07■■□□□ 1.6
TRADD-202ENST00000486556 SAFBQ15424 915 aaKnown RBP eCLIP25.07■■□□□ 1.6
TRADD-202ENST00000486556 PI4KBQ9UBF8 816 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 FAM198AQ9UFP1 575 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 PCDHAC2Q9Y5I4 1007 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 ADAMTSL1Q8N6G6 1762 aa25.07■■□□□ 1.6
TRADD-202ENST00000486556 ENTPD3O75355 529 aa25.06■■□□□ 1.6
TRADD-202ENST00000486556 PLEKHA8P1O95397 391 aa25.06■■□□□ 1.6
TRADD-202ENST00000486556 PTGER2P43116 358 aa25.06■■□□□ 1.6
TRADD-202ENST00000486556 MYSM1Q5VVJ2 828 aa25.06■■□□□ 1.6
TRADD-202ENST00000486556 USP28Q96RU2 1077 aa25.06■■□□□ 1.6
TRADD-202ENST00000486556 RTEL1Q9NZ71 1219 aa25.06■■□□□ 1.6
TRADD-202ENST00000486556 V9GY48 417 aaPredicted RBP25.06■■□□□ 1.6
TRADD-202ENST00000486556 MMP1P03956 469 aa25.05■■□□□ 1.6
TRADD-202ENST00000486556 GRM4Q14833 912 aa25.05■■□□□ 1.6
TRADD-202ENST00000486556 KLHL34Q8N239 644 aa25.05■■□□□ 1.6
TRADD-202ENST00000486556 SRBD1Q8N5C6 995 aaKnown RBP25.05■■□□□ 1.6
TRADD-202ENST00000486556 JDP2Q8WYK2 163 aa25.05■■□□□ 1.6
TRADD-202ENST00000486556 PRMT6Q96LA8 375 aaPredicted RBP25.05■■□□□ 1.6
TRADD-202ENST00000486556 CCDC17Q96LX7 622 aa25.05■■□□□ 1.6
TRADD-202ENST00000486556 BRCA1P38398 1863 aaKnown RBP25.05■■□□□ 1.6
TRADD-202ENST00000486556 UBE2Q2LH0YL09 131 aa25.05■■□□□ 1.6
TRADD-202ENST00000486556 TOP1P11387 765 aaKnown RBP25.05■■□□□ 1.6
TRADD-202ENST00000486556 MMP14P50281 582 aa25.05■■□□□ 1.6
TRADD-202ENST00000486556 GNL2Q13823 731 aaKnown RBP25.05■■□□□ 1.6
TRADD-202ENST00000486556 PKN1Q16512 942 aa25.05■■□□□ 1.6
TRADD-202ENST00000486556 L1TD1Q5T7N2 865 aaKnown RBP25.05■■□□□ 1.6
TRADD-202ENST00000486556 FOXP4Q8IVH2 680 aaPredicted RBP25.05■■□□□ 1.6
TRADD-202ENST00000486556 MYH15Q9Y2K3 1946 aa25.04■■□□□ 1.6
TRADD-202ENST00000486556 KIF28PB7ZC32 967 aa25.04■■□□□ 1.6
TRADD-202ENST00000486556 PPP4R3BQ5MIZ7 849 aa25.04■■□□□ 1.6
TRADD-202ENST00000486556 CEP95Q96GE4 821 aa25.04■■□□□ 1.6
TRADD-202ENST00000486556 TDRD3Q9H7E2 651 aaKnown RBP25.04■■□□□ 1.6
TRADD-202ENST00000486556 POLR3EQ9NVU0 708 aa25.04■■□□□ 1.6
TRADD-202ENST00000486556 COL4A5P29400 1685 aa25.04■■□□□ 1.6
TRADD-202ENST00000486556 LETM1O95202 739 aaPredicted RBP25.03■■□□□ 1.6
TRADD-202ENST00000486556 SHMT1P34896 483 aa25.03■■□□□ 1.6
TRADD-202ENST00000486556 ZFPM1Q8IX07 1006 aa25.03■■□□□ 1.6
TRADD-202ENST00000486556 LZTS2Q9BRK4 669 aa25.03■■□□□ 1.6
TRADD-202ENST00000486556 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.03■■□□□ 1.6
TRADD-202ENST00000486556 FOXP1Q9H334 677 aaPredicted RBP25.03■■□□□ 1.6
TRADD-202ENST00000486556 MTMR4Q9NYA4 1195 aa25.03■■□□□ 1.6
TRADD-202ENST00000486556 CNTNAP5Q8WYK1 1306 aa25.03■■□□□ 1.6
TRADD-202ENST00000486556 FER1L6Q2WGJ9 1857 aa25.03■■□□□ 1.6
TRADD-202ENST00000486556 DLGAP5Q15398 846 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 TMOD2Q9NZR1 351 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 LTBP3Q9NS15 1303 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 IGKV6D-41A0A0C4DH26 115 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 PSDA5PKW4 1024 aaPredicted RBP25.02■■□□□ 1.6
TRADD-202ENST00000486556 SPDYE2BA6NHP3 402 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 YEATS4O95619 227 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 SPDYE6P0CI01 402 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 CACNB3P54284 484 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 CXCL9Q07325 125 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 TCP10Q12799 353 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 MTMR14Q8NCE2 650 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 MAD2L2Q9UI95 211 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 BCS1LQ9Y276 419 aa25.02■■□□□ 1.6
TRADD-202ENST00000486556 COL2A1P02458 1487 aaPredicted RBP25.01■■□□□ 1.59
TRADD-202ENST00000486556 PALM3A6NDB9 673 aaPredicted RBP25.01■■□□□ 1.59
TRADD-202ENST00000486556 CEBPZQ03701 1054 aaKnown RBP25.01■■□□□ 1.59
TRADD-202ENST00000486556 CCDC183Q5T5S1 534 aa25.01■■□□□ 1.59
TRADD-202ENST00000486556 CIAPIN1Q6FI81 312 aa25.01■■□□□ 1.59
TRADD-202ENST00000486556 METTL16Q86W50 562 aaKnown RBP25.01■■□□□ 1.59
TRADD-202ENST00000486556 ATRNL1Q5VV63 1379 aa25.01■■□□□ 1.59
TRADD-202ENST00000486556 DDTLA6NHG4 134 aaPredicted RBP25■■□□□ 1.59
TRADD-202ENST00000486556 NFKBIEO00221 500 aa25■■□□□ 1.59
TRADD-202ENST00000486556 AKR1B1P15121 316 aa25■■□□□ 1.59
TRADD-202ENST00000486556 NASPP49321 788 aaPredicted RBP25■■□□□ 1.59
TRADD-202ENST00000486556 TNIP1Q15025 636 aa25■■□□□ 1.59
TRADD-202ENST00000486556 ZSCAN29Q8IWY8 852 aaPredicted RBP25■■□□□ 1.59
TRADD-202ENST00000486556 PGBD1Q96JS3 809 aa25■■□□□ 1.59
TRADD-202ENST00000486556 SMARCA1P28370 1054 aa25■■□□□ 1.59
TRADD-202ENST00000486556 NOSTRINQ8IVI9 506 aa25■■□□□ 1.59
TRADD-202ENST00000486556 DIS3L2Q8IYB7 885 aaKnown RBP25■■□□□ 1.59
TRADD-202ENST00000486556 LINC00301Q8NCQ3 95 aa25■■□□□ 1.59
TRADD-202ENST00000486556 ZBTB12Q9Y330 459 aaPredicted RBP25■■□□□ 1.59
TRADD-202ENST00000486556 PFKFB3Q16875 520 aaPredicted RBP24.99■■□□□ 1.59
TRADD-202ENST00000486556 SH3BP5LQ7L8J4 393 aa24.99■■□□□ 1.59
TRADD-202ENST00000486556 KCNG4Q8TDN1 519 aa24.99■■□□□ 1.59
TRADD-202ENST00000486556 PHF20Q9BVI0 1012 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms