RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 SLFN5Q08AF3 891 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 LMOD3Q0VAK6 560 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 TCEAL1Q15170 157 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 PCNX4Q63HM2 1172 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 RAB44Q7Z6P3 723 aaPredicted RBP7.67□□□□□ -1.18
USP41-204ENST00000486536 TRMT2AQ8IZ69 625 aaKnown RBP7.67□□□□□ -1.18
USP41-204ENST00000486536 ASAP3Q8TDY4 903 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 ANAPC16Q96DE5 110 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 TRIM55Q9BYV6 548 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 IL16Q14005 1332 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 PLEKHG2Q9H7P9 1386 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 NHSL1Q5SYE7 1610 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 SLC35F4A4IF30 521 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 ZBTB42B2RXF5 422 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 J3QW42 95 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 PAGE1O75459 146 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 CD33P20138 364 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 CRKP46108 304 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 RIPK4P57078 832 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 RPS26P62854 115 aaKnown RBP7.66□□□□□ -1.18
USP41-204ENST00000486536 PTSQ03393 145 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 CALD1Q05682 793 aaKnown RBP7.66□□□□□ -1.18
USP41-204ENST00000486536 FAAP100Q0VG06 881 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 RAB33AQ14088 237 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 FAM196AQ6ZSG2 479 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 SLITRK4Q8IW52 837 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 TRIM22Q8IYM9 498 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 ABHD17AQ96GS6 310 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 PHACTR3Q96KR7 559 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 SRPK1Q96SB4 655 aaKnown RBP7.66□□□□□ -1.18
USP41-204ENST00000486536 SRRTQ9BXP5 876 aaKnown RBP7.66□□□□□ -1.18
USP41-204ENST00000486536 PBX4Q9BYU1 374 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 ZNF576Q9H609 170 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 RRP7AQ9Y3A4 280 aaKnown RBP7.66□□□□□ -1.18
USP41-204ENST00000486536 MRPL42Q9Y6G3 142 aaKnown RBP7.66□□□□□ -1.18
USP41-204ENST00000486536 NCAPD2Q15021 1401 aa7.66□□□□□ -1.18
USP41-204ENST00000486536 AXIN1O15169 862 aa7.65□□□□□ -1.18
USP41-204ENST00000486536 HTATSF1O43719 755 aaKnown RBP7.65□□□□□ -1.18
USP41-204ENST00000486536 HSD3B2P26439 372 aa7.65□□□□□ -1.18
USP41-204ENST00000486536 SEZ6Q53EL9 994 aa7.65□□□□□ -1.18
USP41-204ENST00000486536 DUSP27Q5VZP5 1158 aa7.65□□□□□ -1.18
USP41-204ENST00000486536 TRPM4Q8TD43 1214 aa7.65□□□□□ -1.18
USP41-204ENST00000486536 HNRNPLLQ8WVV9 542 aaKnown RBP7.65□□□□□ -1.18
USP41-204ENST00000486536 KIAA0232Q92628 1395 aa7.65□□□□□ -1.18
USP41-204ENST00000486536 LTV1Q96GA3 475 aaPredicted RBP7.65□□□□□ -1.18
USP41-204ENST00000486536 RASSF4Q9H2L5 321 aa7.65□□□□□ -1.18
USP41-204ENST00000486536 MYH16Q9H6N6 1097 aa7.65□□□□□ -1.18
USP41-204ENST00000486536 PRDM11Q9NQV5 511 aa7.65□□□□□ -1.18
USP41-204ENST00000486536 TMEM39AQ9NV64 488 aa7.65□□□□□ -1.18
USP41-204ENST00000486536 PRKAG3Q9UGI9 489 aa7.65□□□□□ -1.18
USP41-204ENST00000486536 GPN3Q9UHW5 284 aaPredicted RBP7.65□□□□□ -1.18
USP41-204ENST00000486536 R3HCC1Q9Y3T6 440 aaKnown RBP7.65□□□□□ -1.18
USP41-204ENST00000486536 RGPD1P0DJD0 1748 aa7.64□□□□□ -1.19
USP41-204ENST00000486536 AFF2P51816 1311 aa7.64□□□□□ -1.19
USP41-204ENST00000486536 SOBPA7XYQ1 873 aa7.64□□□□□ -1.19
USP41-204ENST00000486536 DGAT1O75907 488 aa7.64□□□□□ -1.19
USP41-204ENST00000486536 CLSTN1O94985 981 aa7.64□□□□□ -1.19
USP41-204ENST00000486536 LMNB1P20700 586 aa7.64□□□□□ -1.19
USP41-204ENST00000486536 ZNF157P51786 506 aaPredicted RBP7.64□□□□□ -1.19
USP41-204ENST00000486536 MLLT1Q03111 559 aaPredicted RBP7.64□□□□□ -1.19
USP41-204ENST00000486536 AMOTQ4VCS5 1084 aa7.64□□□□□ -1.19
USP41-204ENST00000486536 HFE2Q6ZVN8 426 aa7.64□□□□□ -1.19
USP41-204ENST00000486536 CCDC84Q86UT8 332 aaPredicted RBP7.64□□□□□ -1.19
USP41-204ENST00000486536 TRIM42Q8IWZ5 723 aa7.64□□□□□ -1.19
USP41-204ENST00000486536 JARID2Q92833 1246 aaPredicted RBP7.64□□□□□ -1.19
USP41-204ENST00000486536 IGFLR1Q9H665 355 aa7.64□□□□□ -1.19
USP41-204ENST00000486536 MAP2P11137 1827 aaKnown RBP7.64□□□□□ -1.19
USP41-204ENST00000486536 RGS12O14924 1447 aa7.63□□□□□ -1.19
USP41-204ENST00000486536 TLR3O15455 904 aaKnown RBP7.63□□□□□ -1.19
USP41-204ENST00000486536 F13A1P00488 732 aa7.63□□□□□ -1.19
USP41-204ENST00000486536 CT47B1P0C2W7 299 aaPredicted RBP7.63□□□□□ -1.19
USP41-204ENST00000486536 GPLD1P80108 840 aa7.63□□□□□ -1.19
USP41-204ENST00000486536 ATP11AP98196 1134 aa7.63□□□□□ -1.19
USP41-204ENST00000486536 PPP2R3AQ06190 1150 aa7.63□□□□□ -1.19
USP41-204ENST00000486536 BNC2Q6ZN30 1099 aaPredicted RBP7.63□□□□□ -1.19
USP41-204ENST00000486536 FBXO27Q8NI29 283 aa7.63□□□□□ -1.19
USP41-204ENST00000486536 SHDQ96IW2 340 aa7.63□□□□□ -1.19
USP41-204ENST00000486536 POP1Q99575 1024 aaKnown RBP7.63□□□□□ -1.19
USP41-204ENST00000486536 MUC3BQ9H195 1237 aa7.63□□□□□ -1.19
USP41-204ENST00000486536 PPT2Q9UMR5 302 aa7.63□□□□□ -1.19
USP41-204ENST00000486536 PCDHB5Q9Y5E4 795 aa7.63□□□□□ -1.19
USP41-204ENST00000486536 RNF123Q5XPI4 1314 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 WDR17Q8IZU2 1322 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 SMAD7O15105 426 aaKnown RBP7.62□□□□□ -1.19
USP41-204ENST00000486536 GHRHP01286 108 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 BMP6P22004 513 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 MCM4P33991 863 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 GNAI1P63096 354 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 CHRNA2Q15822 529 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 MTHFSDQ2M296 383 aaKnown RBP7.62□□□□□ -1.19
USP41-204ENST00000486536 PLEKHO1Q53GL0 409 aaPredicted RBP7.62□□□□□ -1.19
USP41-204ENST00000486536 CCDC81Q6ZN84 652 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 CCDC155Q8N6L0 562 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 GATAD2BQ8WXI9 593 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 GMCL1Q96IK5 515 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 MIR1-1HGQ9H1L0 117 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 IFT57Q9NWB7 429 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 RCAN3Q9UKA8 241 aa7.62□□□□□ -1.19
USP41-204ENST00000486536 ATXN7L1Q9ULK2 861 aaPredicted RBP7.62□□□□□ -1.19
USP41-204ENST00000486536 SAMM50Q9Y512 469 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms