RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 PPATQ06203 517 aa10.63□□□□□ -0.71
COL12A1-208ENST00000486533 CCDC158Q5M9N0 1113 aa10.63□□□□□ -0.71
COL12A1-208ENST00000486533 GAS2L3Q86XJ1 694 aa10.63□□□□□ -0.71
COL12A1-208ENST00000486533 CD99L2Q8TCZ2 262 aa10.63□□□□□ -0.71
COL12A1-208ENST00000486533 RAD50Q92878 1312 aa10.63□□□□□ -0.71
COL12A1-208ENST00000486533 RFX7Q2KHR2 1363 aa10.62□□□□□ -0.71
COL12A1-208ENST00000486533 LDHCP07864 332 aa10.62□□□□□ -0.71
COL12A1-208ENST00000486533 HSPA4P34932 840 aa10.62□□□□□ -0.71
COL12A1-208ENST00000486533 OTOP1Q7RTM1 612 aa10.62□□□□□ -0.71
COL12A1-208ENST00000486533 ZNF384Q8TF68 577 aa10.62□□□□□ -0.71
COL12A1-208ENST00000486533 NSUN4Q96CB9 384 aaKnown RBP10.62□□□□□ -0.71
COL12A1-208ENST00000486533 ZSCAN31Q96LW9 406 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-208ENST00000486533 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
COL12A1-208ENST00000486533 GPR108Q9NPR9 543 aa10.62□□□□□ -0.71
COL12A1-208ENST00000486533 DDX4Q9NQI0 724 aaKnown RBP10.62□□□□□ -0.71
COL12A1-208ENST00000486533 SNRKQ9NRH2 765 aa10.62□□□□□ -0.71
COL12A1-208ENST00000486533 ZNF112Q9UJU3 913 aa10.62□□□□□ -0.71
COL12A1-208ENST00000486533 MKI67P46013 3256 aaKnown RBP10.62□□□□□ -0.71
COL12A1-208ENST00000486533 PDE4DIPQ5VU43 2346 aa10.61□□□□□ -0.71
COL12A1-208ENST00000486533 GPR75-ASB3A0A0A6YYF3 556 aa10.61□□□□□ -0.71
COL12A1-208ENST00000486533 DDTLA6NHG4 134 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-208ENST00000486533 BTBD19C9JJ37 291 aa10.61□□□□□ -0.71
COL12A1-208ENST00000486533 UVSSAQ2YD98 709 aa10.61□□□□□ -0.71
COL12A1-208ENST00000486533 CLASRPQ8N2M8 674 aaKnown RBP10.61□□□□□ -0.71
COL12A1-208ENST00000486533 RHPN1Q8TCX5 695 aa10.61□□□□□ -0.71
COL12A1-208ENST00000486533 TSPY26PQ9H489 355 aa10.61□□□□□ -0.71
COL12A1-208ENST00000486533 EFCC1Q9HA90 598 aa10.61□□□□□ -0.71
COL12A1-208ENST00000486533 PICK1Q9NRD5 415 aa10.61□□□□□ -0.71
COL12A1-208ENST00000486533 DIAPH3Q9NSV4 1193 aa10.61□□□□□ -0.71
COL12A1-208ENST00000486533 ATRNL1Q5VV63 1379 aa10.61□□□□□ -0.71
COL12A1-208ENST00000486533 MAST2Q6P0Q8 1798 aa10.61□□□□□ -0.71
COL12A1-208ENST00000486533 RRP9O43818 475 aaKnown RBP10.6□□□□□ -0.71
COL12A1-208ENST00000486533 RHBDL3P58872 404 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 NOL9Q5SY16 702 aaKnown RBP10.6□□□□□ -0.71
COL12A1-208ENST00000486533 SH3BP5LQ7L8J4 393 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 TMEM87AQ8NBN3 555 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 NOL10Q9BSC4 688 aaKnown RBP10.6□□□□□ -0.71
COL12A1-208ENST00000486533 ZCCHC17Q9NP64 241 aaKnown RBP10.6□□□□□ -0.71
COL12A1-208ENST00000486533 SH2B1Q9NRF2 756 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-208ENST00000486533 PHF20L1A8MW92 1017 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 SGSM2O43147 1006 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 TLR2O60603 784 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 SLURP2P0DP57 97 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 ARHGEF6Q15052 776 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 NAA16Q6N069 864 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-208ENST00000486533 TEX11Q8IYF3 940 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 SCYL3Q8IZE3 742 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 PDLIM2Q96JY6 352 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 CCDC8Q9H0W5 538 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-208ENST00000486533 ZSWIM6Q9HCJ5 1215 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 TLR7Q9NYK1 1049 aaKnown RBP10.6□□□□□ -0.71
COL12A1-208ENST00000486533 DBNLQ9UJU6 430 aaKnown RBP10.6□□□□□ -0.71
COL12A1-208ENST00000486533 KCNH4Q9UQ05 1017 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 PTPN22Q9Y2R2 807 aa10.6□□□□□ -0.71
COL12A1-208ENST00000486533 DOCK1Q14185 1865 aa10.59□□□□□ -0.71
COL12A1-208ENST00000486533 MYO5AQ9Y4I1 1855 aaKnown RBP10.59□□□□□ -0.71
COL12A1-208ENST00000486533 PDHXO00330 501 aa10.59□□□□□ -0.71
COL12A1-208ENST00000486533 BAG3O95817 575 aa10.59□□□□□ -0.71
COL12A1-208ENST00000486533 KIF22Q14807 665 aa10.59□□□□□ -0.71
COL12A1-208ENST00000486533 SH3RF3Q8TEJ3 882 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-208ENST00000486533 TM6SF1Q9BZW5 370 aa10.59□□□□□ -0.71
COL12A1-208ENST00000486533 AATFQ9NY61 560 aaKnown RBP eCLIP10.59□□□□□ -0.71
COL12A1-208ENST00000486533 LIMCH1Q9UPQ0 1083 aa10.59□□□□□ -0.71
COL12A1-208ENST00000486533 ZHX2Q9Y6X8 837 aa10.59□□□□□ -0.71
COL12A1-208ENST00000486533 FAM196BA6NMK8 535 aa10.58□□□□□ -0.72
COL12A1-208ENST00000486533 CTNND1O60716 968 aaKnown RBP10.58□□□□□ -0.72
COL12A1-208ENST00000486533 MAP4K4O95819 1239 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-208ENST00000486533 ZKSCAN1P17029 563 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-208ENST00000486533 PTPRAP18433 802 aa10.58□□□□□ -0.72
COL12A1-208ENST00000486533 PSMA5P28066 241 aa10.58□□□□□ -0.72
COL12A1-208ENST00000486533 ZAP70P43403 619 aa10.58□□□□□ -0.72
COL12A1-208ENST00000486533 CAP1Q01518 475 aa10.58□□□□□ -0.72
COL12A1-208ENST00000486533 ANKRD23Q86SG2 305 aa10.58□□□□□ -0.72
COL12A1-208ENST00000486533 AACSQ86V21 672 aa10.58□□□□□ -0.72
COL12A1-208ENST00000486533 EAF2Q96CJ1 260 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-208ENST00000486533 ZNF512BQ96KM6 892 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-208ENST00000486533 KRTAP3-3Q9BYR6 98 aa10.58□□□□□ -0.72
COL12A1-208ENST00000486533 KRTAP3-2Q9BYR7 98 aa10.58□□□□□ -0.72
COL12A1-208ENST00000486533 OSBPL5Q9H0X9 879 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-208ENST00000486533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL12A1-208ENST00000486533 NOL7Q9UMY1 257 aaKnown RBP10.58□□□□□ -0.72
COL12A1-208ENST00000486533 SMC3Q9UQE7 1217 aa10.58□□□□□ -0.72
COL12A1-208ENST00000486533 TRIM75PA6NK02 468 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 CXCL11O14625 94 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 ZNF500O60304 480 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-208ENST00000486533 OFD1O75665 1012 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 IDH1O75874 414 aaKnown RBP10.57□□□□□ -0.72
COL12A1-208ENST00000486533 IFIT2P09913 472 aaKnown RBP10.57□□□□□ -0.72
COL12A1-208ENST00000486533 LACTBP83111 547 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-208ENST00000486533 MAP3K10Q02779 954 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 ANKRD1Q15327 319 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 CCDC183Q5T5S1 534 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 SPNS2Q8IVW8 549 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 GPT2Q8TD30 523 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 EVI5LQ96CN4 794 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 MAP7D2Q96T17 732 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 IL1RAPL2Q9NP60 686 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 ECHDC1Q9NTX5 307 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 CPA4Q9UI42 421 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms