RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 LUZP1Q86V48 1076 aa23.47■■□□□ 1.35
HPS3-206ENST00000486530 TEX11Q8IYF3 940 aa23.47■■□□□ 1.35
HPS3-206ENST00000486530 SDF4Q9BRK5 362 aa23.47■■□□□ 1.35
HPS3-206ENST00000486530 DNAJC25Q9H1X3 360 aa23.47■■□□□ 1.35
HPS3-206ENST00000486530 MKNK2Q9HBH9 465 aa23.47■■□□□ 1.35
HPS3-206ENST00000486530 ZNF287Q9HBT7 754 aa23.47■■□□□ 1.35
HPS3-206ENST00000486530 SUGT1Q9Y2Z0 365 aa23.47■■□□□ 1.35
HPS3-206ENST00000486530 RIMBP2O15034 1052 aa23.46■■□□□ 1.35
HPS3-206ENST00000486530 PFKFB1P16118 471 aa23.46■■□□□ 1.35
HPS3-206ENST00000486530 SLC4A8Q2Y0W8 1093 aa23.46■■□□□ 1.35
HPS3-206ENST00000486530 DPP8Q6V1X1 898 aaPredicted RBP23.46■■□□□ 1.35
HPS3-206ENST00000486530 MAPKAPK5Q8IW41 473 aa23.46■■□□□ 1.35
HPS3-206ENST00000486530 ANKS1AQ92625 1134 aa23.46■■□□□ 1.35
HPS3-206ENST00000486530 DYNLL2Q96FJ2 89 aa23.46■■□□□ 1.35
HPS3-206ENST00000486530 KAT14Q9H8E8 782 aa23.46■■□□□ 1.35
HPS3-206ENST00000486530 ZKSCAN5Q9Y2L8 839 aa23.46■■□□□ 1.35
HPS3-206ENST00000486530 CUTAO60888 179 aa23.45■■□□□ 1.35
HPS3-206ENST00000486530 CHRNA5P30532 468 aa23.45■■□□□ 1.35
HPS3-206ENST00000486530 KIF5BP33176 963 aa23.45■■□□□ 1.35
HPS3-206ENST00000486530 PHF20Q9BVI0 1012 aa23.45■■□□□ 1.35
HPS3-206ENST00000486530 TCP11L1Q9NUJ3 509 aa23.45■■□□□ 1.35
HPS3-206ENST00000486530 ANO10Q9NW15 660 aa23.45■■□□□ 1.35
HPS3-206ENST00000486530 V9GY48 417 aaPredicted RBP23.45■■□□□ 1.35
HPS3-206ENST00000486530 FAM237AA0A1B0GTK4 181 aa23.45■■□□□ 1.34
HPS3-206ENST00000486530 ZNF202O95125 648 aa23.45■■□□□ 1.34
HPS3-206ENST00000486530 TOB1P50616 345 aaPredicted RBP23.44■■□□□ 1.34
HPS3-206ENST00000486530 RHBDL3P58872 404 aa23.44■■□□□ 1.34
HPS3-206ENST00000486530 PLCB2Q00722 1185 aa23.44■■□□□ 1.34
HPS3-206ENST00000486530 TIGD1Q96MW7 591 aa23.44■■□□□ 1.34
HPS3-206ENST00000486530 ZC3H12CQ9C0D7 883 aaKnown RBP23.44■■□□□ 1.34
HPS3-206ENST00000486530 TMX4Q9H1E5 349 aaPredicted RBP23.44■■□□□ 1.34
HPS3-206ENST00000486530 VPS54Q9P1Q0 977 aa23.44■■□□□ 1.34
HPS3-206ENST00000486530 HPSEQ9Y251 543 aa23.44■■□□□ 1.34
HPS3-206ENST00000486530 FLT1P17948 1338 aa23.44■■□□□ 1.34
HPS3-206ENST00000486530 TSPY3P0CV98 308 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 TSPY8P0CW00 308 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 KRT2P35908 639 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 GTF2IP78347 998 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 NR5A1Q13285 461 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 ZNF444Q8N0Y2 327 aaPredicted RBP23.43■■□□□ 1.34
HPS3-206ENST00000486530 SRBD1Q8N5C6 995 aaKnown RBP23.43■■□□□ 1.34
HPS3-206ENST00000486530 BRMS1Q9HCU9 246 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 IL17RBQ9NRM6 502 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 SAP30BPQ9UHR5 308 aaKnown RBP23.43■■□□□ 1.34
HPS3-206ENST00000486530 AP5Z1O43299 807 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 PLCD1P51178 756 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 RESP18Q5W5W9 173 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 KRI1Q8N9T8 703 aaKnown RBP23.43■■□□□ 1.34
HPS3-206ENST00000486530 SHISA4Q96DD7 197 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 CEP131Q9UPN4 1083 aa23.43■■□□□ 1.34
HPS3-206ENST00000486530 SYKP43405 635 aa23.42■■□□□ 1.34
HPS3-206ENST00000486530 SHC4Q6S5L8 630 aa23.42■■□□□ 1.34
HPS3-206ENST00000486530 C16orf86Q6ZW13 317 aa23.42■■□□□ 1.34
HPS3-206ENST00000486530 OXER1Q8TDS5 423 aa23.42■■□□□ 1.34
HPS3-206ENST00000486530 CNKSR1Q969H4 720 aa23.42■■□□□ 1.34
HPS3-206ENST00000486530 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.42■■□□□ 1.34
HPS3-206ENST00000486530 KIAA1468Q9P260 1216 aa23.42■■□□□ 1.34
HPS3-206ENST00000486530 PNMA1Q8ND90 353 aa23.41■■□□□ 1.34
HPS3-206ENST00000486530 C7orf43Q8WVR3 580 aa23.41■■□□□ 1.34
HPS3-206ENST00000486530 MORC2Q9Y6X9 1032 aaPredicted RBP23.41■■□□□ 1.34
HPS3-206ENST00000486530 SNED1Q8TER0 1413 aa23.41■■□□□ 1.34
HPS3-206ENST00000486530 RASA1P20936 1047 aa23.41■■□□□ 1.34
HPS3-206ENST00000486530 C11orf57Q6ZUT1 292 aaPredicted RBP23.41■■□□□ 1.34
HPS3-206ENST00000486530 SLC16A10Q8TF71 515 aa23.41■■□□□ 1.34
HPS3-206ENST00000486530 DAGLAQ9Y4D2 1042 aa23.41■■□□□ 1.34
HPS3-206ENST00000486530 IQCB1Q15051 598 aa23.4■■□□□ 1.34
HPS3-206ENST00000486530 CEP57L1Q8IYX8 460 aa23.4■■□□□ 1.34
HPS3-206ENST00000486530 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.34
HPS3-206ENST00000486530 SLX4Q8IY92 1834 aa23.4■■□□□ 1.34
HPS3-206ENST00000486530 MYH8P13535 1937 aa23.39■■□□□ 1.34
HPS3-206ENST00000486530 hCG_1642624A0A1W2PR95 340 aa23.39■■□□□ 1.34
HPS3-206ENST00000486530 SCG2P13521 617 aa23.39■■□□□ 1.34
HPS3-206ENST00000486530 GRM4Q14833 912 aa23.39■■□□□ 1.34
HPS3-206ENST00000486530 PFKFB3Q16875 520 aaPredicted RBP23.39■■□□□ 1.34
HPS3-206ENST00000486530 DOK7Q18PE1 504 aa23.39■■□□□ 1.34
HPS3-206ENST00000486530 SLC44A5Q8NCS7 719 aa23.39■■□□□ 1.34
HPS3-206ENST00000486530 EYA3Q99504 573 aa23.39■■□□□ 1.34
HPS3-206ENST00000486530 NAT10Q9H0A0 1025 aaKnown RBP23.39■■□□□ 1.34
HPS3-206ENST00000486530 CABP5Q9NP86 173 aa23.39■■□□□ 1.34
HPS3-206ENST00000486530 USP17L3A6NCW0 530 aa23.39■■□□□ 1.33
HPS3-206ENST00000486530 USP17L4A6NCW7 530 aa23.39■■□□□ 1.33
HPS3-206ENST00000486530 GOLGA6L19H0YKK7 550 aa23.39■■□□□ 1.33
HPS3-206ENST00000486530 CDK8P49336 464 aa23.39■■□□□ 1.33
HPS3-206ENST00000486530 GNAQP50148 359 aa23.39■■□□□ 1.33
HPS3-206ENST00000486530 ZRSR1Q15695 479 aaKnown RBP23.39■■□□□ 1.33
HPS3-206ENST00000486530 USP17L1Q7RTZ2 530 aa23.39■■□□□ 1.33
HPS3-206ENST00000486530 CLIC6Q96NY7 704 aa23.39■■□□□ 1.33
HPS3-206ENST00000486530 ZNF500O60304 480 aaPredicted RBP23.38■■□□□ 1.33
HPS3-206ENST00000486530 PTPREP23469 700 aa23.38■■□□□ 1.33
HPS3-206ENST00000486530 FBXW7Q969H0 707 aa23.38■■□□□ 1.33
HPS3-206ENST00000486530 FBXO2Q9UK22 296 aaPredicted RBP23.38■■□□□ 1.33
HPS3-206ENST00000486530 PCDHB6Q9Y5E3 794 aa23.38■■□□□ 1.33
HPS3-206ENST00000486530 BAZ2BQ9UIF8 2168 aaKnown RBP23.38■■□□□ 1.33
HPS3-206ENST00000486530 ZNF579Q8NAF0 562 aaKnown RBP23.37■■□□□ 1.33
HPS3-206ENST00000486530 C10orf71Q711Q0 1435 aa23.37■■□□□ 1.33
HPS3-206ENST00000486530 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.36■■□□□ 1.33
HPS3-206ENST00000486530 TRIM75PA6NK02 468 aa23.36■■□□□ 1.33
HPS3-206ENST00000486530 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.36■■□□□ 1.33
HPS3-206ENST00000486530 GOLGA6L6A8MZA4 724 aa23.36■■□□□ 1.33
HPS3-206ENST00000486530 BMP15O95972 392 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms