RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 HMGCS2P54868 508 aa10.45□□□□□ -0.74
XRN1-212ENST00000486211 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
XRN1-212ENST00000486211 TRIM60Q495X7 471 aa10.45□□□□□ -0.74
XRN1-212ENST00000486211 DNAAF4Q8WXU2 420 aa10.45□□□□□ -0.74
XRN1-212ENST00000486211 TIFAQ96CG3 184 aa10.45□□□□□ -0.74
XRN1-212ENST00000486211 GAS2L1Q99501 681 aaPredicted RBP10.45□□□□□ -0.74
XRN1-212ENST00000486211 APBA2Q99767 749 aa10.45□□□□□ -0.74
XRN1-212ENST00000486211 CHMP4AQ9BY43 222 aa10.45□□□□□ -0.74
XRN1-212ENST00000486211 DDX20Q9UHI6 824 aaKnown RBP10.45□□□□□ -0.74
XRN1-212ENST00000486211 LRRFIP2Q9Y608 721 aaKnown RBP10.45□□□□□ -0.74
XRN1-212ENST00000486211 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.44□□□□□ -0.74
XRN1-212ENST00000486211 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.44□□□□□ -0.74
XRN1-212ENST00000486211 DDTLA6NHG4 134 aaPredicted RBP10.44□□□□□ -0.74
XRN1-212ENST00000486211 ENTPD3O75355 529 aa10.44□□□□□ -0.74
XRN1-212ENST00000486211 FRAT2O75474 233 aaPredicted RBP10.44□□□□□ -0.74
XRN1-212ENST00000486211 RGS3P49796 1198 aa10.44□□□□□ -0.74
XRN1-212ENST00000486211 SPP2Q13103 211 aa10.44□□□□□ -0.74
XRN1-212ENST00000486211 PABPC4Q13310 644 aaKnown RBP eCLIP10.44□□□□□ -0.74
XRN1-212ENST00000486211 SH3D19Q5HYK7 790 aa10.44□□□□□ -0.74
XRN1-212ENST00000486211 TMEM31Q5JXX7 168 aa10.44□□□□□ -0.74
XRN1-212ENST00000486211 VGLL2Q8N8G2 317 aa10.44□□□□□ -0.74
XRN1-212ENST00000486211 IDI2Q9BXS1 227 aa10.44□□□□□ -0.74
XRN1-212ENST00000486211 PORCNQ9H237 461 aa10.44□□□□□ -0.74
XRN1-212ENST00000486211 PRDM12Q9H4Q4 367 aa10.44□□□□□ -0.74
XRN1-212ENST00000486211 USP40Q9NVE5 1235 aa10.44□□□□□ -0.74
XRN1-212ENST00000486211 FLRT1Q9NZU1 646 aa10.44□□□□□ -0.74
XRN1-212ENST00000486211 CXXC1Q9P0U4 656 aaPredicted RBP10.44□□□□□ -0.74
XRN1-212ENST00000486211 UTYO14607 1347 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 MROH5Q6ZUA9 1318 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 MSCO60682 206 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 IGHA2P01877 340 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 MAPK4P31152 587 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 FLIIQ13045 1269 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 CCDC85BQ15834 202 aaPredicted RBP10.43□□□□□ -0.74
XRN1-212ENST00000486211 PROX2Q3B8N5 592 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 Q3C1V9 767 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 CAVIN4Q5BKX8 364 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 GPR142Q7Z601 462 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 ZNF280CQ8ND82 737 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 TRPV1Q8NER1 839 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 IL27Q8NEV9 243 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 GPRC5AQ8NFJ5 357 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 P2RX7Q99572 595 aaKnown RBP10.43□□□□□ -0.74
XRN1-212ENST00000486211 STK31Q9BXU1 1019 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 RBPJLQ9UBG7 517 aa10.43□□□□□ -0.74
XRN1-212ENST00000486211 CHD9Q3L8U1 2897 aa10.42□□□□□ -0.74
XRN1-212ENST00000486211 GPR37L1O60883 481 aa10.42□□□□□ -0.74
XRN1-212ENST00000486211 PRDX5P30044 214 aa10.42□□□□□ -0.74
XRN1-212ENST00000486211 MRE11P49959 708 aa10.42□□□□□ -0.74
XRN1-212ENST00000486211 GJC2Q5T442 439 aaPredicted RBP10.42□□□□□ -0.74
XRN1-212ENST00000486211 C1orf53Q5VUE5 145 aa10.42□□□□□ -0.74
XRN1-212ENST00000486211 DDX4Q9NQI0 724 aaKnown RBP10.42□□□□□ -0.74
XRN1-212ENST00000486211 XIRP2A4UGR9 3374 aa10.42□□□□□ -0.74
XRN1-212ENST00000486211 KIF16BQ96L93 1317 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 DPYSL4O14531 572 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 RGS20O76081 388 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 HOXA7P31268 230 aaPredicted RBP10.41□□□□□ -0.74
XRN1-212ENST00000486211 KCNQ1P51787 676 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 HERVK_113P62684 666 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 TFF2Q03403 129 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 TLE2Q04725 743 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 MAP2K5Q13163 448 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 RRP1BQ14684 758 aaKnown RBP10.41□□□□□ -0.74
XRN1-212ENST00000486211 BEND3Q5T5X7 828 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 MFSD14CQ5VZR4 134 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 PLEKHH3Q7Z736 793 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 ANKK1Q8NFD2 765 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 WDR66Q8TBY9 1149 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 EPAS1Q99814 870 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 PBX4Q9BYU1 374 aa10.41□□□□□ -0.74
XRN1-212ENST00000486211 ATAD5Q96QE3 1844 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 FAM196BA6NMK8 535 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 KIAA0355O15063 1070 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 PDE8BO95263 885 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 CYBAP13498 195 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 FGFR2P21802 821 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 ERVK-9P63128 1117 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 ERVK-24P63145 666 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 IRX3P78415 501 aaPredicted RBP10.4□□□□□ -0.74
XRN1-212ENST00000486211 FKBP5Q13451 457 aaPredicted RBP10.4□□□□□ -0.74
XRN1-212ENST00000486211 LRRC24Q50LG9 513 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 ZSCAN29Q8IWY8 852 aaPredicted RBP10.4□□□□□ -0.74
XRN1-212ENST00000486211 EDC3Q96F86 508 aaKnown RBP10.4□□□□□ -0.74
XRN1-212ENST00000486211 KAZALD1Q96I82 304 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 TBC1D2Q9BYX2 928 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 OSBPL5Q9H0X9 879 aaPredicted RBP10.4□□□□□ -0.74
XRN1-212ENST00000486211 WDR70Q9NW82 654 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 ADAMTS8Q9UP79 889 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 TACC3Q9Y6A5 838 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 REV3LO60673 3130 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 MYH13Q9UKX3 1938 aa10.4□□□□□ -0.74
XRN1-212ENST00000486211 PLXNA1Q9UIW2 1896 aa10.4□□□□□ -0.75
XRN1-212ENST00000486211 GAKO14976 1311 aa10.39□□□□□ -0.75
XRN1-212ENST00000486211 FAM86C2PA6NEL3 165 aa10.39□□□□□ -0.75
XRN1-212ENST00000486211 GRXCR1A8MXD5 290 aa10.39□□□□□ -0.75
XRN1-212ENST00000486211 GRM8O00222 908 aa10.39□□□□□ -0.75
XRN1-212ENST00000486211 HOXC6P09630 235 aa10.39□□□□□ -0.75
XRN1-212ENST00000486211 CNGA1P29973 690 aa10.39□□□□□ -0.75
XRN1-212ENST00000486211 CALD1Q05682 793 aaKnown RBP10.39□□□□□ -0.75
XRN1-212ENST00000486211 FPGSQ05932 587 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms