RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ZBTB47Q9UFB7 747 aaPredicted RBP22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 IRF5Q13568 498 aa22.12■■□□□ 1.13
PRPF40A-209ENST00000486100 LRRFIP1Q32MZ4 808 aaKnown RBP22.12■■□□□ 1.13
PRPF40A-209ENST00000486100 CTR9Q6PD62 1173 aa22.12■■□□□ 1.13
PRPF40A-209ENST00000486100 SLAIN1Q8ND83 568 aa22.12■■□□□ 1.13
PRPF40A-209ENST00000486100 PXYLP1Q8TE99 480 aa22.12■■□□□ 1.13
PRPF40A-209ENST00000486100 GTF3C2Q8WUA4 911 aaPredicted RBP22.12■■□□□ 1.13
PRPF40A-209ENST00000486100 CYP2D7A0A087X1C5 515 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 USP17L15C9J2P7 530 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 USP17L13C9JLJ4 530 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 USP17L11C9JVI0 530 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 USP17L18D6R9N7 530 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 USP17L22D6RA61 530 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 USP17L17D6RBQ6 530 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 USP17L19D6RCP7 530 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 USP17L20D6RJB6 530 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 ADCY3O60266 1144 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 MX1P20591 662 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 CDK8P49336 464 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 UBXN2AP68543 259 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 USP17L24Q0WX57 530 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 MTFR1Q15390 333 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 TMEM179Q6ZVK1 233 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 GPRC5AQ8NFJ5 357 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 CCDC17Q96LX7 622 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 RBPJLQ9UBG7 517 aa22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 BIN2Q9UBW5 565 aaPredicted RBP22.11■■□□□ 1.13
PRPF40A-209ENST00000486100 CENPFP49454 3210 aa22.1■■□□□ 1.13
PRPF40A-209ENST00000486100 SMIM22K7EJ46 135 aa22.1■■□□□ 1.13
PRPF40A-209ENST00000486100 DDX60LQ5H9U9 1706 aaKnown RBP22.1■■□□□ 1.13
PRPF40A-209ENST00000486100 GIMAP6Q6P9H5 292 aa22.1■■□□□ 1.13
PRPF40A-209ENST00000486100 CATSPERGQ6ZRH7 1159 aa22.1■■□□□ 1.13
PRPF40A-209ENST00000486100 C16orf86Q6ZW13 317 aa22.1■■□□□ 1.13
PRPF40A-209ENST00000486100 TXNRD2Q9NNW7 524 aa22.1■■□□□ 1.13
PRPF40A-209ENST00000486100 A0A1W2PRG0 241 aa22.09■■□□□ 1.13
PRPF40A-209ENST00000486100 GSG1L2A8MUP6 293 aa22.09■■□□□ 1.13
PRPF40A-209ENST00000486100 VCAM1P19320 739 aa22.09■■□□□ 1.13
PRPF40A-209ENST00000486100 ARPP21Q9UBL0 812 aaPredicted RBP22.09■■□□□ 1.13
PRPF40A-209ENST00000486100 GJD2Q9UKL4 321 aa22.09■■□□□ 1.13
PRPF40A-209ENST00000486100 SALL3Q9BXA9 1300 aa22.08■■□□□ 1.13
PRPF40A-209ENST00000486100 TNRC18O15417 2968 aaPredicted RBP22.08■■□□□ 1.13
PRPF40A-209ENST00000486100 PEX10O60683 326 aa22.08■■□□□ 1.13
PRPF40A-209ENST00000486100 AKR1B1P15121 316 aa22.08■■□□□ 1.13
PRPF40A-209ENST00000486100 GNAT2P19087 354 aa22.08■■□□□ 1.13
PRPF40A-209ENST00000486100 Q3C1V9 767 aa22.08■■□□□ 1.13
PRPF40A-209ENST00000486100 SBK1Q52WX2 424 aa22.08■■□□□ 1.13
PRPF40A-209ENST00000486100 POTEEQ6S8J3 1075 aa22.08■■□□□ 1.13
PRPF40A-209ENST00000486100 NAV1Q8NEY1 1877 aa22.07■■□□□ 1.12
PRPF40A-209ENST00000486100 GPAA1O43292 621 aa22.07■■□□□ 1.12
PRPF40A-209ENST00000486100 CCL5P13501 91 aa22.07■■□□□ 1.12
PRPF40A-209ENST00000486100 ERVK-9P63128 1117 aa22.07■■□□□ 1.12
PRPF40A-209ENST00000486100 ERVK-24P63145 666 aa22.07■■□□□ 1.12
PRPF40A-209ENST00000486100 SIAH1Q8IUQ4 282 aa22.07■■□□□ 1.12
PRPF40A-209ENST00000486100 RABGAP1Q9Y3P9 1069 aa22.07■■□□□ 1.12
PRPF40A-209ENST00000486100 M0R2C6 588 aa22.06■■□□□ 1.12
PRPF40A-209ENST00000486100 ELNP15502 786 aa22.06■■□□□ 1.12
PRPF40A-209ENST00000486100 NKX2-3Q8TAU0 364 aa22.06■■□□□ 1.12
PRPF40A-209ENST00000486100 PAGR1Q9BTK6 254 aa22.06■■□□□ 1.12
PRPF40A-209ENST00000486100 FSD1Q9BTV5 496 aa22.06■■□□□ 1.12
PRPF40A-209ENST00000486100 RNF208Q9H0X6 261 aa22.06■■□□□ 1.12
PRPF40A-209ENST00000486100 RWDD1Q9H446 243 aaPredicted RBP22.06■■□□□ 1.12
PRPF40A-209ENST00000486100 RPAP3Q9H6T3 665 aaPredicted RBP22.06■■□□□ 1.12
PRPF40A-209ENST00000486100 STAP2Q9UGK3 403 aa22.06■■□□□ 1.12
PRPF40A-209ENST00000486100 KIAA0100Q14667 2235 aaKnown RBP22.05■■□□□ 1.12
PRPF40A-209ENST00000486100 PATL2C9JE40 543 aaKnown RBP22.05■■□□□ 1.12
PRPF40A-209ENST00000486100 GJB1P08034 283 aa22.05■■□□□ 1.12
PRPF40A-209ENST00000486100 MAPK4P31152 587 aa22.05■■□□□ 1.12
PRPF40A-209ENST00000486100 LBX2Q6XYB7 198 aa22.05■■□□□ 1.12
PRPF40A-209ENST00000486100 ARHGEF10LQ9HCE6 1279 aa22.05■■□□□ 1.12
PRPF40A-209ENST00000486100 INHAP05111 366 aa22.04■■□□□ 1.12
PRPF40A-209ENST00000486100 ICA1Q05084 483 aa22.04■■□□□ 1.12
PRPF40A-209ENST00000486100 ZMYM1Q5SVZ6 1142 aa22.04■■□□□ 1.12
PRPF40A-209ENST00000486100 CCAR1Q8IX12 1150 aaKnown RBP22.04■■□□□ 1.12
PRPF40A-209ENST00000486100 TMX2Q9Y320 296 aa22.04■■□□□ 1.12
PRPF40A-209ENST00000486100 MINDY4BA8MYZ0 360 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 CNMDO75829 334 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 APPP05067 770 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 GJA8P48165 433 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 PDE1AP54750 535 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 COG2Q14746 738 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 EXOC6Q8TAG9 804 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 LPAR1Q92633 364 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 SEC62Q99442 399 aaKnown RBP22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 NUDT12Q9BQG2 462 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 UNC93B1Q9H1C4 597 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 PORCNQ9H237 461 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 SH2D4AQ9H788 454 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 KANSL2Q9H9L4 492 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 HOXC10Q9NYD6 342 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 MGAMO43451 1857 aa22.03■■□□□ 1.12
PRPF40A-209ENST00000486100 CCNA1P78396 465 aa22.02■■□□□ 1.12
PRPF40A-209ENST00000486100 KIAA1755Q5JYT7 1200 aa22.02■■□□□ 1.12
PRPF40A-209ENST00000486100 PRPF38BQ5VTL8 546 aaKnown RBP22.02■■□□□ 1.12
PRPF40A-209ENST00000486100 CLEC10AQ8IUN9 316 aa22.02■■□□□ 1.12
PRPF40A-209ENST00000486100 SMC5Q8IY18 1101 aa22.02■■□□□ 1.12
PRPF40A-209ENST00000486100 IFNL3Q8IZI9 196 aa22.02■■□□□ 1.12
PRPF40A-209ENST00000486100 EVI5LQ96CN4 794 aa22.02■■□□□ 1.12
PRPF40A-209ENST00000486100 MKNK2Q9HBH9 465 aa22.02■■□□□ 1.12
PRPF40A-209ENST00000486100 EPB41L4AQ9HCS5 686 aaPredicted RBP22.02■■□□□ 1.12
PRPF40A-209ENST00000486100 RBBP6Q7Z6E9 1792 aaKnown RBP22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms