RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 WDR18Q9BV38 432 aa12.18□□□□□ -0.46
SND1-213ENST00000486037 SRCIN1Q9C0H9 1055 aa12.18□□□□□ -0.46
SND1-213ENST00000486037 HCN4Q9Y3Q4 1203 aa12.18□□□□□ -0.46
SND1-213ENST00000486037 KBTBD13C9JR72 458 aa12.17□□□□□ -0.46
SND1-213ENST00000486037 PTPREP23469 700 aa12.17□□□□□ -0.46
SND1-213ENST00000486037 ATP2B2Q01814 1243 aa12.17□□□□□ -0.46
SND1-213ENST00000486037 EXOSC9Q06265 439 aaKnown RBP12.17□□□□□ -0.46
SND1-213ENST00000486037 LRRC41Q15345 812 aa12.17□□□□□ -0.46
SND1-213ENST00000486037 CCAR1Q8IX12 1150 aaKnown RBP12.17□□□□□ -0.46
SND1-213ENST00000486037 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.17□□□□□ -0.465e-7■□□□□ 10.6
SND1-213ENST00000486037 TBC1D2Q9BYX2 928 aa12.17□□□□□ -0.46
SND1-213ENST00000486037 DNAJC18Q9H819 358 aa12.17□□□□□ -0.46
SND1-213ENST00000486037 EMILIN3Q9NT22 766 aa12.17□□□□□ -0.46
SND1-213ENST00000486037 TMOD4Q9NZQ9 345 aa12.17□□□□□ -0.46
SND1-213ENST00000486037 MROH7-TTC4A0A0A0MT08 1334 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 FAM86C2PA6NEL3 165 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 EYA2O00167 538 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 KIAA0355O15063 1070 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 CLTBP09497 229 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 HOXC6P09630 235 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 IGFBP4P22692 258 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 ADORA1P30542 326 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 FPGSQ05932 587 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 GRB14Q14449 540 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 FAM47AQ5JRC9 791 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 PRAMEF19Q5SWL8 479 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 WDR78Q5VTH9 848 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 C1orf53Q5VUE5 145 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 C16orf59Q7L2K0 433 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 DZIP1Q86YF9 867 aaKnown RBP12.16□□□□□ -0.46
SND1-213ENST00000486037 FAM163AQ96GL9 167 aaPredicted RBP12.16□□□□□ -0.46
SND1-213ENST00000486037 AS3MTQ9HBK9 375 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 BTBD7Q9P203 1132 aa12.16□□□□□ -0.46
SND1-213ENST00000486037 GPR75-ASB3A0A0A6YYF3 556 aa12.15□□□□□ -0.46
SND1-213ENST00000486037 SLC15A5A6NIM6 579 aa12.15□□□□□ -0.46
SND1-213ENST00000486037 GDF11O95390 407 aa12.15□□□□□ -0.46
SND1-213ENST00000486037 ARRDC4Q8NCT1 418 aa12.15□□□□□ -0.46
SND1-213ENST00000486037 IL27Q8NEV9 243 aa12.15□□□□□ -0.46
SND1-213ENST00000486037 CWC22Q9HCG8 908 aaKnown RBP12.15□□□□□ -0.46
SND1-213ENST00000486037 CXXC1Q9P0U4 656 aaPredicted RBP12.15□□□□□ -0.46
SND1-213ENST00000486037 ABCF2Q9UG63 623 aa12.15□□□□□ -0.46
SND1-213ENST00000486037 DENND2AQ9ULE3 1009 aa12.15□□□□□ -0.46
SND1-213ENST00000486037 TACC3Q9Y6A5 838 aa12.15□□□□□ -0.46
SND1-213ENST00000486037 USP17L10C9JJH3 530 aa12.14□□□□□ -0.47
SND1-213ENST00000486037 PQBP1O60828 265 aaKnown RBP12.14□□□□□ -0.47
SND1-213ENST00000486037 RAG1P15918 1043 aa12.14□□□□□ -0.47
SND1-213ENST00000486037 MECOMQ03112 1051 aa12.14□□□□□ -0.47
SND1-213ENST00000486037 RASGRF1Q13972 1273 aa12.14□□□□□ -0.47
SND1-213ENST00000486037 ATP2B3Q16720 1220 aa12.14□□□□□ -0.47
SND1-213ENST00000486037 TMEM31Q5JXX7 168 aa12.14□□□□□ -0.47
SND1-213ENST00000486037 RABGAP1Q9Y3P9 1069 aa12.14□□□□□ -0.47
SND1-213ENST00000486037 SEPT4O43236 478 aa12.13□□□□□ -0.47
SND1-213ENST00000486037 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
SND1-213ENST00000486037 IRX6P78412 446 aaPredicted RBP12.13□□□□□ -0.47
SND1-213ENST00000486037 FAAP100Q0VG06 881 aa12.13□□□□□ -0.47
SND1-213ENST00000486037 ZYXQ15942 572 aaKnown RBP12.13□□□□□ -0.47
SND1-213ENST00000486037 TMEM240Q5SV17 173 aa12.13□□□□□ -0.47
SND1-213ENST00000486037 RASIP1Q5U651 963 aa12.13□□□□□ -0.47
SND1-213ENST00000486037 CCDC129Q6ZRS4 1044 aa12.13□□□□□ -0.47
SND1-213ENST00000486037 MICALL1Q8N3F8 863 aa12.13□□□□□ -0.47
SND1-213ENST00000486037 SIL1Q9H173 461 aa12.13□□□□□ -0.47
SND1-213ENST00000486037 PHF24Q9UPV7 400 aa12.13□□□□□ -0.47
SND1-213ENST00000486037 GBF1Q92538 1859 aa12.12□□□□□ -0.47
SND1-213ENST00000486037 TRANK1O15050 2925 aa12.12□□□□□ -0.47
SND1-213ENST00000486037 SMCHD1A6NHR9 2005 aa12.12□□□□□ -0.47
SND1-213ENST00000486037 C19orf81C9J6K1 198 aa12.12□□□□□ -0.47
SND1-213ENST00000486037 COBLO75128 1261 aa12.12□□□□□ -0.47
SND1-213ENST00000486037 RARSP54136 660 aaKnown RBP12.12□□□□□ -0.47
SND1-213ENST00000486037 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
SND1-213ENST00000486037 GTF3C2Q8WUA4 911 aaPredicted RBP12.12□□□□□ -0.47
SND1-213ENST00000486037 NKX2-4Q9H2Z4 354 aa12.12□□□□□ -0.47
SND1-213ENST00000486037 TMEM39AQ9NV64 488 aa12.12□□□□□ -0.47
SND1-213ENST00000486037 GNL3LQ9NVN8 582 aaKnown RBP12.12□□□□□ -0.47
SND1-213ENST00000486037 ZBTB21Q9ULJ3 1066 aa12.12□□□□□ -0.47
SND1-213ENST00000486037 YBX2Q9Y2T7 364 aaKnown RBP12.12□□□□□ -0.47
SND1-213ENST00000486037 A0A1W2PQ45 241 aaPredicted RBP12.11□□□□□ -0.47
SND1-213ENST00000486037 A0A1W2PQY0 241 aa12.11□□□□□ -0.47
SND1-213ENST00000486037 SEMA3EO15041 775 aa12.11□□□□□ -0.47
SND1-213ENST00000486037 BCAR3O75815 825 aa12.11□□□□□ -0.47
SND1-213ENST00000486037 NEFLP07196 543 aa12.11□□□□□ -0.47
SND1-213ENST00000486037 ASNSP08243 561 aa12.11□□□□□ -0.47
SND1-213ENST00000486037 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
SND1-213ENST00000486037 ACRP10323 421 aa12.11□□□□□ -0.47
SND1-213ENST00000486037 ADORA2AP29274 412 aa12.11□□□□□ -0.47
SND1-213ENST00000486037 OLFML2BQ68BL8 750 aa12.11□□□□□ -0.47
SND1-213ENST00000486037 LENG1Q96BZ8 264 aaPredicted RBP12.11□□□□□ -0.47
SND1-213ENST00000486037 HERC5Q9UII4 1024 aaKnown RBP12.11□□□□□ -0.47
SND1-213ENST00000486037 ZNF236Q9UL36 1845 aa12.1□□□□□ -0.47
SND1-213ENST00000486037 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
SND1-213ENST00000486037 GLRX3O76003 335 aaKnown RBP12.1□□□□□ -0.47
SND1-213ENST00000486037 PGK1P00558 417 aa12.1□□□□□ -0.47
SND1-213ENST00000486037 MRE11P49959 708 aa12.1□□□□□ -0.47
SND1-213ENST00000486037 CCNA1P78396 465 aa12.1□□□□□ -0.47
SND1-213ENST00000486037 USP17L2Q6R6M4 530 aa12.1□□□□□ -0.47
SND1-213ENST00000486037 PI16Q6UXB8 463 aa12.1□□□□□ -0.47
SND1-213ENST00000486037 CATSPERGQ6ZRH7 1159 aa12.1□□□□□ -0.47
SND1-213ENST00000486037 ZGPATQ8N5A5 531 aaKnown RBP12.1□□□□□ -0.47
SND1-213ENST00000486037 SLC44A5Q8NCS7 719 aa12.1□□□□□ -0.47
SND1-213ENST00000486037 SH3RF3Q8TEJ3 882 aaPredicted RBP12.1□□□□□ -0.47
SND1-213ENST00000486037 NSUN4Q96CB9 384 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms