RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 MAST3O60307 1309 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 PDS5AQ29RF7 1337 aaKnown RBP6.78□□□□□ -1.32
COPS3-208ENST00000486032 ZNF532Q9HCE3 1301 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 SALL1Q9NSC2 1324 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 CLRN2A0PK11 232 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 PROCP04070 461 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 LDHCP07864 332 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 TIMP2P16035 220 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 PDE6AP16499 860 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 EPHX2P34913 555 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 ADD2P35612 726 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 BTDP43251 543 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 WDR4P57081 412 aaKnown RBP6.78□□□□□ -1.32
COPS3-208ENST00000486032 DYNLL1P63167 89 aaKnown RBP6.78□□□□□ -1.32
COPS3-208ENST00000486032 GSTO1P78417 241 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 TEKT1Q969V4 418 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 NSUN4Q96CB9 384 aaKnown RBP6.78□□□□□ -1.32
COPS3-208ENST00000486032 GMLQ99445 158 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 KRTAP4-12Q9BQ66 201 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 TDRD3Q9H7E2 651 aaKnown RBP6.78□□□□□ -1.32
COPS3-208ENST00000486032 VEZTQ9HBM0 779 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 MYOZ2Q9NPC6 264 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 DIAPH3Q9NSV4 1193 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 USP40Q9NVE5 1235 aa6.78□□□□□ -1.32
COPS3-208ENST00000486032 AATFQ9NY61 560 aaKnown RBP eCLIP6.78□□□□□ -1.32
COPS3-208ENST00000486032 MROH7-TTC4A0A0A0MT08 1334 aa6.77□□□□□ -1.32
COPS3-208ENST00000486032 MAGEB6P1A0A0J9YX57 407 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 IQCA1LA6NCM1 817 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 RNF113AO15541 343 aaKnown RBP6.77□□□□□ -1.33
COPS3-208ENST00000486032 TOMM70O94826 608 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 ADH1CP00326 375 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 VEGFAP15692 232 aaPredicted RBP6.77□□□□□ -1.33
COPS3-208ENST00000486032 CACNB3P54284 484 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 NMIQ13287 307 aaPredicted RBP6.77□□□□□ -1.33
COPS3-208ENST00000486032 PICALMQ13492 652 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 LRRFIP1Q32MZ4 808 aaKnown RBP6.77□□□□□ -1.33
COPS3-208ENST00000486032 NBPF9Q3BBW0 867 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 CWC27Q6UX04 472 aaKnown RBP6.77□□□□□ -1.33
COPS3-208ENST00000486032 CCDC129Q6ZRS4 1044 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 ADGRA1Q86SQ6 560 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 ZNF384Q8TF68 577 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 DPF2Q92785 391 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 PRMT6Q96LA8 375 aaPredicted RBP6.77□□□□□ -1.33
COPS3-208ENST00000486032 FAM227BQ96M60 508 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 SEC62Q99442 399 aaKnown RBP6.77□□□□□ -1.33
COPS3-208ENST00000486032 ARMT1Q9H993 441 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 ADARB2Q9NS39 739 aaKnown RBP6.77□□□□□ -1.33
COPS3-208ENST00000486032 SUGT1Q9Y2Z0 365 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 DAGLAQ9Y4D2 1042 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 AK9Q5TCS8 1911 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 MYH2Q9UKX2 1941 aa6.77□□□□□ -1.33
COPS3-208ENST00000486032 TCP10L2B9ZVM9 353 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 ADM5C9JUS6 153 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 M0R2C6 588 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 WNT10BO00744 389 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 MYO1BO43795 1136 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 MBD4O95243 580 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 BAG3O95817 575 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 ITGB2P05107 769 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 ZFYP08048 801 aaPredicted RBP6.76□□□□□ -1.33
COPS3-208ENST00000486032 MLLT3P42568 568 aaPredicted RBP6.76□□□□□ -1.33
COPS3-208ENST00000486032 USP5P45974 858 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 TCP10Q12799 353 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 SLC4A8Q2Y0W8 1093 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 BMP2KLQ5H9B9 411 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 RNFT1Q5M7Z0 435 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 C6orf118Q5T5N4 469 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 HHIPL2Q6UWX4 724 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 SULF1Q8IWU6 871 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 TEX11Q8IYF3 940 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 LCORLQ8N3X6 602 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 SH3RF3Q8TEJ3 882 aaPredicted RBP6.76□□□□□ -1.33
COPS3-208ENST00000486032 APPBP2Q92624 585 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 OSBP2Q969R2 916 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 AIDAQ96BJ3 306 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 KRTAP9-9Q9BYP9 154 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 KRTAP9-4Q9BYQ2 154 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 GLIS2Q9BZE0 524 aaPredicted RBP6.76□□□□□ -1.33
COPS3-208ENST00000486032 PUS7LQ9H0K6 701 aaKnown RBP6.76□□□□□ -1.33
COPS3-208ENST00000486032 TMOD2Q9NZR1 351 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.76□□□□□ -1.33
COPS3-208ENST00000486032 SERPINA10Q9UK55 444 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 DOCK2Q92608 1830 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 PASKQ96RG2 1323 aa6.76□□□□□ -1.33
COPS3-208ENST00000486032 A0A0D9SFI3 127 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 TCRBV5S4A2TA0A5A2 114 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 HIP1O00291 1037 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 GPAA1O43292 621 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 PRKAB2O43741 272 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 CDC45O75419 566 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 APPP05067 770 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 HSPA6P17066 643 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 ZNF280AP59817 542 aaPredicted RBP6.75□□□□□ -1.33
COPS3-208ENST00000486032 HDLBPQ00341 1268 aaKnown RBP6.75□□□□□ -1.33
COPS3-208ENST00000486032 UBE3CQ15386 1083 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 ANGEL2Q5VTE6 544 aaKnown RBP6.75□□□□□ -1.33
COPS3-208ENST00000486032 PRAMEF18Q5VWM3 479 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 APOBEC3HQ6NTF7 200 aaKnown RBP6.75□□□□□ -1.33
COPS3-208ENST00000486032 CDC42EP5Q6NZY7 148 aa6.75□□□□□ -1.33
COPS3-208ENST00000486032 MAPKAPK5Q8IW41 473 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms