RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 TAF1CQ15572 869 aaPredicted RBP7.53□□□□□ -1.2
GCFC2-209ENST00000486016 TMC4Q7Z404 712 aa7.53□□□□□ -1.2
GCFC2-209ENST00000486016 PPP1R13LQ8WUF5 828 aa7.53□□□□□ -1.2
GCFC2-209ENST00000486016 DPH2Q9BQC3 489 aaPredicted RBP7.53□□□□□ -1.2
GCFC2-209ENST00000486016 ZSCAN22P10073 491 aaPredicted RBP7.52□□□□□ -1.21
GCFC2-209ENST00000486016 RLBP1P12271 317 aa7.52□□□□□ -1.21
GCFC2-209ENST00000486016 KIR3DL1P43629 444 aa7.52□□□□□ -1.21
GCFC2-209ENST00000486016 KCNMB1Q16558 191 aa7.52□□□□□ -1.21
GCFC2-209ENST00000486016 CCDC84Q86UT8 332 aaPredicted RBP7.52□□□□□ -1.21
GCFC2-209ENST00000486016 UBE2FQ969M7 185 aa7.52□□□□□ -1.21
GCFC2-209ENST00000486016 Q96M66 194 aa7.52□□□□□ -1.21
GCFC2-209ENST00000486016 RAPGEFL1Q9UHV5 662 aa7.52□□□□□ -1.21
GCFC2-209ENST00000486016 ADAM30Q9UKF2 790 aa7.52□□□□□ -1.21
GCFC2-209ENST00000486016 FAM221AA4D161 298 aa7.51□□□□□ -1.21
GCFC2-209ENST00000486016 ESR1P03372 595 aa7.51□□□□□ -1.21
GCFC2-209ENST00000486016 PIWIL2Q8TC59 973 aaKnown RBP7.51□□□□□ -1.21
GCFC2-209ENST00000486016 LIN37Q96GY3 246 aaPredicted RBP7.51□□□□□ -1.21
GCFC2-209ENST00000486016 KRTAP9-3Q9BYQ3 159 aa7.51□□□□□ -1.21
GCFC2-209ENST00000486016 DUSP15Q9H1R2 295 aaPredicted RBP7.51□□□□□ -1.21
GCFC2-209ENST00000486016 CORINQ9Y5Q5 1042 aa7.51□□□□□ -1.21
GCFC2-209ENST00000486016 CILPO75339 1184 aa7.5□□□□□ -1.21
GCFC2-209ENST00000486016 GLI1P08151 1106 aa7.5□□□□□ -1.21
GCFC2-209ENST00000486016 LMNB1P20700 586 aa7.5□□□□□ -1.21
GCFC2-209ENST00000486016 CYP7A1P22680 504 aa7.5□□□□□ -1.21
GCFC2-209ENST00000486016 PSMD2Q13200 908 aa7.5□□□□□ -1.21
GCFC2-209ENST00000486016 ANKLE2Q86XL3 938 aa7.5□□□□□ -1.21
GCFC2-209ENST00000486016 JARID2Q92833 1246 aaPredicted RBP7.5□□□□□ -1.21
GCFC2-209ENST00000486016 FAM161BQ96MY7 647 aa7.5□□□□□ -1.21
GCFC2-209ENST00000486016 CEP131Q9UPN4 1083 aa7.5□□□□□ -1.21
GCFC2-209ENST00000486016 WASH4PA8MWX3 477 aa7.49□□□□□ -1.21
GCFC2-209ENST00000486016 SRFP11831 508 aa7.49□□□□□ -1.21
GCFC2-209ENST00000486016 PDE4BQ07343 736 aa7.49□□□□□ -1.21
GCFC2-209ENST00000486016 GAB4Q2WGN9 574 aa7.49□□□□□ -1.21
GCFC2-209ENST00000486016 TMEM201Q5SNT2 666 aa7.49□□□□□ -1.21
GCFC2-209ENST00000486016 BNC2Q6ZN30 1099 aaPredicted RBP7.49□□□□□ -1.21
GCFC2-209ENST00000486016 KIRREL1Q96J84 757 aa7.49□□□□□ -1.21
GCFC2-209ENST00000486016 RHOVQ96L33 236 aa7.49□□□□□ -1.21
GCFC2-209ENST00000486016 ALPK1Q96QP1 1244 aa7.49□□□□□ -1.21
GCFC2-209ENST00000486016 ZSWIM5Q9P217 1185 aa7.49□□□□□ -1.21
GCFC2-209ENST00000486016 PRR36Q9H6K5 1346 aa7.49□□□□□ -1.21
GCFC2-209ENST00000486016 ETV3P41162 512 aa7.48□□□□□ -1.21
GCFC2-209ENST00000486016 TAGLNQ01995 201 aaKnown RBP7.48□□□□□ -1.21
GCFC2-209ENST00000486016 LMNB2Q03252 620 aa7.48□□□□□ -1.21
GCFC2-209ENST00000486016 TTLL10Q6ZVT0 673 aa7.48□□□□□ -1.21
GCFC2-209ENST00000486016 SYDE1Q6ZW31 735 aaPredicted RBP7.48□□□□□ -1.21
GCFC2-209ENST00000486016 TMPRSS7Q7RTY8 843 aa7.48□□□□□ -1.21
GCFC2-209ENST00000486016 UPK3BL1B0FP48 263 aa7.47□□□□□ -1.21
GCFC2-209ENST00000486016 UPK3BL2E5RIL1 263 aa7.47□□□□□ -1.21
GCFC2-209ENST00000486016 CAMK2GQ13555 558 aaPredicted RBP7.47□□□□□ -1.21
GCFC2-209ENST00000486016 PRR23BQ6ZRT6 265 aa7.47□□□□□ -1.21
GCFC2-209ENST00000486016 GATAD2BQ8WXI9 593 aa7.47□□□□□ -1.21
GCFC2-209ENST00000486016 DNAJC25-GNG10A0A024R161 153 aa7.46□□□□□ -1.22
GCFC2-209ENST00000486016 F13A1P00488 732 aa7.46□□□□□ -1.22
GCFC2-209ENST00000486016 PF4P02776 101 aa7.46□□□□□ -1.22
GCFC2-209ENST00000486016 KRT1P04264 644 aa7.46□□□□□ -1.22
GCFC2-209ENST00000486016 RALGPS1Q5JS13 557 aa7.46□□□□□ -1.22
GCFC2-209ENST00000486016 AEBP1Q8IUX7 1158 aa7.46□□□□□ -1.22
GCFC2-209ENST00000486016 CYB5D2Q8WUJ1 264 aa7.46□□□□□ -1.22
GCFC2-209ENST00000486016 CRELD1Q96HD1 420 aa7.46□□□□□ -1.22
GCFC2-209ENST00000486016 SP110Q9HB58 689 aa7.46□□□□□ -1.22
GCFC2-209ENST00000486016 F6X3S4 739 aa7.45□□□□□ -1.22
GCFC2-209ENST00000486016 PLCG1P19174 1290 aa7.45□□□□□ -1.22
GCFC2-209ENST00000486016 TMEM67Q5HYA8 995 aa7.45□□□□□ -1.22
GCFC2-209ENST00000486016 SLFN12Q8IYM2 578 aa7.45□□□□□ -1.22
GCFC2-209ENST00000486016 CCDC120Q96HB5 630 aa7.45□□□□□ -1.22
GCFC2-209ENST00000486016 RSRP1Q9BUV0 290 aa7.45□□□□□ -1.22
GCFC2-209ENST00000486016 GPR62Q9BZJ7 368 aa7.45□□□□□ -1.22
GCFC2-209ENST00000486016 SLAMF8Q9P0V8 285 aa7.45□□□□□ -1.22
GCFC2-209ENST00000486016 POLR3KQ9Y2Y1 108 aaPredicted RBP7.45□□□□□ -1.22
GCFC2-209ENST00000486016 C1QTNF9P0C862 333 aa7.44□□□□□ -1.22
GCFC2-209ENST00000486016 GARTP22102 1010 aa7.44□□□□□ -1.22
GCFC2-209ENST00000486016 XPCQ01831 940 aaPredicted RBP7.44□□□□□ -1.22
GCFC2-209ENST00000486016 DTWD2Q8NBA8 298 aa7.44□□□□□ -1.22
GCFC2-209ENST00000486016 TMEM74Q96NL1 305 aa7.44□□□□□ -1.22
GCFC2-209ENST00000486016 HPXP02790 462 aa7.43□□□□□ -1.22
GCFC2-209ENST00000486016 ERVFC1P60507 584 aa7.43□□□□□ -1.22
GCFC2-209ENST00000486016 KRTAP5-3Q6L8H2 238 aa7.43□□□□□ -1.22
GCFC2-209ENST00000486016 TTC6Q86TZ1 520 aa7.43□□□□□ -1.22
GCFC2-209ENST00000486016 ADAMTS10Q9H324 1103 aa7.43□□□□□ -1.22
GCFC2-209ENST00000486016 TMEM59LQ9UK28 342 aa7.43□□□□□ -1.22
GCFC2-209ENST00000486016 SORBS3O60504 671 aa7.42□□□□□ -1.22
GCFC2-209ENST00000486016 DNAJA2O60884 412 aa7.42□□□□□ -1.22
GCFC2-209ENST00000486016 LRRN2O75325 713 aa7.42□□□□□ -1.22
GCFC2-209ENST00000486016 TPP2P29144 1249 aaPredicted RBP7.42□□□□□ -1.22
GCFC2-209ENST00000486016 MPZL3Q6UWV2 235 aa7.42□□□□□ -1.22
GCFC2-209ENST00000486016 TSPYL5Q86VY4 417 aaPredicted RBP7.42□□□□□ -1.22
GCFC2-209ENST00000486016 AMIGO3Q86WK7 504 aa7.42□□□□□ -1.22
GCFC2-209ENST00000486016 CREG2Q8IUH2 290 aa7.42□□□□□ -1.22
GCFC2-209ENST00000486016 FAM13CQ8NE31 585 aa7.42□□□□□ -1.22
GCFC2-209ENST00000486016 REV1Q9UBZ9 1251 aa7.42□□□□□ -1.22
GCFC2-209ENST00000486016 PDIA4P13667 645 aaKnown RBP7.41□□□□□ -1.22
GCFC2-209ENST00000486016 YARSP54577 528 aaKnown RBP7.41□□□□□ -1.22
GCFC2-209ENST00000486016 RNF141Q8WVD5 230 aa7.41□□□□□ -1.22
GCFC2-209ENST00000486016 VWCEQ96DN2 955 aa7.41□□□□□ -1.22
GCFC2-209ENST00000486016 KCNQ5Q9NR82 932 aa7.41□□□□□ -1.22
GCFC2-209ENST00000486016 CHURC1-FNTBB4DL54 471 aa7.4□□□□□ -1.22
GCFC2-209ENST00000486016 NFIBO00712 420 aa7.4□□□□□ -1.22
GCFC2-209ENST00000486016 HTR3BO95264 441 aa7.4□□□□□ -1.22
GCFC2-209ENST00000486016 BPNT1O95861 308 aa7.4□□□□□ -1.22
GCFC2-209ENST00000486016 INHBBP09529 407 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms