RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 PHIPQ8WWQ0 1821 aa13.29□□□□□ -0.28
SND1-212ENST00000485871 HSPA8P11142 646 aaKnown RBP13.29□□□□□ -0.28
SND1-212ENST00000485871 JAG1P78504 1218 aa13.29□□□□□ -0.28
SND1-212ENST00000485871 MAP2K1Q02750 393 aaPredicted RBP13.29□□□□□ -0.28
SND1-212ENST00000485871 SHROOM1Q2M3G4 852 aaPredicted RBP13.29□□□□□ -0.28
SND1-212ENST00000485871 IQCA1Q86XH1 822 aa13.29□□□□□ -0.28
SND1-212ENST00000485871 CRACR2BQ8N4Y2 399 aaPredicted RBP13.29□□□□□ -0.28
SND1-212ENST00000485871 ZC3H15Q8WU90 426 aaKnown RBP13.29□□□□□ -0.28
SND1-212ENST00000485871 ZNF274Q96GC6 653 aaPredicted RBP13.29□□□□□ -0.28
SND1-212ENST00000485871 CCDC17Q96LX7 622 aa13.29□□□□□ -0.28
SND1-212ENST00000485871 SH2B1Q9NRF2 756 aaPredicted RBP13.29□□□□□ -0.28
SND1-212ENST00000485871 CHMP5Q9NZZ3 219 aa13.29□□□□□ -0.28
SND1-212ENST00000485871 HPS5Q9UPZ3 1129 aa13.29□□□□□ -0.28
SND1-212ENST00000485871 PASKQ96RG2 1323 aa13.29□□□□□ -0.28
SND1-212ENST00000485871 PFKFB2O60825 505 aa13.28□□□□□ -0.28
SND1-212ENST00000485871 TSPY3P0CV98 308 aa13.28□□□□□ -0.28
SND1-212ENST00000485871 TSPY8P0CW00 308 aa13.28□□□□□ -0.28
SND1-212ENST00000485871 PDIA3P30101 505 aaKnown RBP13.28□□□□□ -0.28
SND1-212ENST00000485871 GUCY1A2P33402 732 aa13.28□□□□□ -0.28
SND1-212ENST00000485871 WTAPQ15007 396 aa13.28□□□□□ -0.28
SND1-212ENST00000485871 NFKBIBQ15653 356 aa13.28□□□□□ -0.28
SND1-212ENST00000485871 DEFB115Q30KQ5 88 aa13.28□□□□□ -0.28
SND1-212ENST00000485871 APOA5Q6Q788 366 aa13.28□□□□□ -0.28
SND1-212ENST00000485871 DGKHQ86XP1 1220 aa13.28□□□□□ -0.28
SND1-212ENST00000485871 UBAC1Q9BSL1 405 aa13.28□□□□□ -0.28
SND1-212ENST00000485871 CLEC11AQ9Y240 323 aa13.28□□□□□ -0.28
SND1-212ENST00000485871 MYH6P13533 1939 aa13.27□□□□□ -0.28
SND1-212ENST00000485871 KLF18A0A0U1RQI7 1052 aa13.27□□□□□ -0.29
SND1-212ENST00000485871 PHF20L1A8MW92 1017 aa13.27□□□□□ -0.29
SND1-212ENST00000485871 DDIT3P35638 169 aa13.27□□□□□ -0.29
SND1-212ENST00000485871 SCRN1Q12765 414 aa13.27□□□□□ -0.29
SND1-212ENST00000485871 SART3Q15020 963 aaKnown RBP13.27□□□□□ -0.29
SND1-212ENST00000485871 CERKLQ49MI3 558 aaPredicted RBP13.27□□□□□ -0.29
SND1-212ENST00000485871 EAPPQ56P03 285 aaPredicted RBP13.27□□□□□ -0.29
SND1-212ENST00000485871 NBPF12Q5TAG4 269 aaPredicted RBP13.27□□□□□ -0.29
SND1-212ENST00000485871 TMTC2Q8N394 836 aa13.27□□□□□ -0.29
SND1-212ENST00000485871 GTF3C6Q969F1 213 aa13.27□□□□□ -0.29
SND1-212ENST00000485871 CEP95Q96GE4 821 aa13.27□□□□□ -0.29
SND1-212ENST00000485871 INTS4Q96HW7 963 aaKnown RBP13.27□□□□□ -0.29
SND1-212ENST00000485871 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.27□□□□□ -0.29
SND1-212ENST00000485871 RCAN1P53805 252 aa13.26□□□□□ -0.29
SND1-212ENST00000485871 FGD1P98174 961 aa13.26□□□□□ -0.29
SND1-212ENST00000485871 CCDC178Q5BJE1 867 aa13.26□□□□□ -0.29
SND1-212ENST00000485871 MIGA2Q7L4E1 593 aa13.26□□□□□ -0.29
SND1-212ENST00000485871 NECAB1Q8N987 351 aa13.26□□□□□ -0.29
SND1-212ENST00000485871 BEGAINQ9BUH8 593 aa13.26□□□□□ -0.29
SND1-212ENST00000485871 FAM217BQ9NTX9 383 aaPredicted RBP13.26□□□□□ -0.29
SND1-212ENST00000485871 MTMR4Q9NYA4 1195 aa13.26□□□□□ -0.29
SND1-212ENST00000485871 ZNF112Q9UJU3 913 aa13.26□□□□□ -0.29
SND1-212ENST00000485871 ERICH2A1L162 156 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 ADM5C9JUS6 153 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 GDF11O95390 407 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 CTDNEP1O95476 244 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 RGS19P49795 217 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 TROAPQ12815 778 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 IFIT1BQ5T764 474 aaKnown RBP13.25□□□□□ -0.29
SND1-212ENST00000485871 PRAMEF18Q5VWM3 479 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 DLK2Q6UY11 383 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 TMEM179Q6ZVK1 233 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 PNMA8AQ86V59 439 aaPredicted RBP13.25□□□□□ -0.29
SND1-212ENST00000485871 CLEC10AQ8IUN9 316 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 SIAH1Q8IUQ4 282 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 CCDC83Q8IWF9 413 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 ZNF654Q8IZM8 581 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 DCPSQ96C86 337 aaKnown RBP13.25□□□□□ -0.29
SND1-212ENST00000485871 TMEM47Q9BQJ4 181 aa13.25□□□□□ -0.29
SND1-212ENST00000485871 ABT1Q9ULW3 272 aaKnown RBP13.25□□□□□ -0.29
SND1-212ENST00000485871 WDR33Q9C0J8 1336 aaKnown RBP13.24□□□□□ -0.29
SND1-212ENST00000485871 PTPRFP10586 1907 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 CCDC69A6NI79 296 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 GOLGA8BA8MQT2 603 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 ITGBL1O95965 494 aaPredicted RBP13.24□□□□□ -0.29
SND1-212ENST00000485871 PTMSP20962 102 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 CAP2P40123 477 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 STK3Q13188 491 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 SEPT2Q15019 361 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 ABCB5Q2M3G0 1257 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 RAB11FIP4Q86YS3 637 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 MYL10Q9BUA6 226 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 TRIM34Q9BYJ4 488 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 SLKQ9H2G2 1235 aaPredicted RBP13.24□□□□□ -0.29
SND1-212ENST00000485871 NYAP2Q9P242 653 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 ZBTB21Q9ULJ3 1066 aa13.24□□□□□ -0.29
SND1-212ENST00000485871 TRPM7Q96QT4 1865 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 RASSF10A6NK89 507 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 ZBTB43O43298 467 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 DDAH1O94760 285 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 GH2P01242 217 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 HSP90AA1P07900 732 aaKnown RBP13.23□□□□□ -0.29
SND1-212ENST00000485871 TOP1P11387 765 aaKnown RBP13.23□□□□□ -0.29
SND1-212ENST00000485871 RXRAP19793 462 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 CDC27P30260 824 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 CCT2P78371 535 aaKnown RBP13.23□□□□□ -0.29
SND1-212ENST00000485871 NTRK3Q16288 839 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 DCAF15Q66K64 600 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 NFXL1Q6ZNB6 911 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 KRT26Q7Z3Y9 468 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 SULF1Q8IWU6 871 aa13.23□□□□□ -0.29
SND1-212ENST00000485871 NSUN7Q8NE18 718 aaKnown RBP13.23□□□□□ -0.29
SND1-212ENST00000485871 SMARCC2Q8TAQ2 1214 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms