RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 MAN1A1P33908 653 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 DDR2Q16832 855 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 RPS26P11Q5JNZ5 115 aaPredicted RBP5.6□□□□□ -1.51
RTN4-213ENST00000485749 SNAP47Q5SQN1 464 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 TXNDC11Q6PKC3 985 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 BEND4Q6ZU67 534 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 C16orf86Q6ZW13 317 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 PCGF5Q86SE9 256 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 CCNJLQ8IV13 435 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 RPUSD2Q8IZ73 545 aaKnown RBP5.6□□□□□ -1.51
RTN4-213ENST00000485749 PRPF38AQ8NAV1 312 aaKnown RBP5.6□□□□□ -1.51
RTN4-213ENST00000485749 GOLM1Q8NBJ4 401 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 ANAPC16Q96DE5 110 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 TCF12Q99081 682 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 CARD10Q9BWT7 1032 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 LIN7BQ9HAP6 207 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 ATG3Q9NT62 314 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 FANCLQ9NW38 375 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 DDX56Q9NY93 547 aaKnown RBP5.6□□□□□ -1.51
RTN4-213ENST00000485749 UBP1Q9NZI7 540 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 KANSL3Q9P2N6 904 aa5.6□□□□□ -1.51
RTN4-213ENST00000485749 ANGEL1Q9UNK9 670 aaKnown RBP5.6□□□□□ -1.51
RTN4-213ENST00000485749 DCAF1Q9Y4B6 1507 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 RPGRIP1LQ68CZ1 1315 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 HMX2A2RU54 273 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 GOLGA6CA6NDK9 693 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 GOLGA6BA6NDN3 693 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 TCERG1O14776 1098 aaKnown RBP5.59□□□□□ -1.51
RTN4-213ENST00000485749 SMAD7O15105 426 aaKnown RBP5.59□□□□□ -1.51
RTN4-213ENST00000485749 PDPK1O15530 556 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 WISP1O95388 367 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 CYP2E1P05181 493 aaPredicted RBP5.59□□□□□ -1.51
RTN4-213ENST00000485749 GOLGA6DP0CG33 693 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 IMPDH2P12268 514 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 ITPKAP23677 461 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 CDC25BP30305 580 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 EIF6P56537 245 aaKnown RBP5.59□□□□□ -1.51
RTN4-213ENST00000485749 DIEXFQ68CQ4 756 aaKnown RBP5.59□□□□□ -1.51
RTN4-213ENST00000485749 KIAA1211Q6ZU35 1233 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 REXO1Q8N1G1 1221 aaKnown RBP5.59□□□□□ -1.51
RTN4-213ENST00000485749 LILRB2Q8N423 598 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 JMYQ8N9B5 988 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 SHKBP1Q8TBC3 707 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 ZNF669Q96BR6 464 aaPredicted RBP5.59□□□□□ -1.51
RTN4-213ENST00000485749 DNAJC7Q99615 494 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 RUSC1Q9BVN2 902 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 ZHX3Q9H4I2 956 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 GOLGA6AQ9NYA3 693 aa5.59□□□□□ -1.51
RTN4-213ENST00000485749 PLIN1O60240 522 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 MED26O95402 600 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 VIL1P09327 827 aaKnown RBP5.58□□□□□ -1.52
RTN4-213ENST00000485749 CD53P19397 219 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 EPHA1P21709 976 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 ZNF165P49910 485 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 AMPD3Q01432 767 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 FAM160A1Q05DH4 1040 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 COL13A1Q5TAT6 717 aaPredicted RBP5.58□□□□□ -1.52
RTN4-213ENST00000485749 TTBK2Q6IQ55 1244 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 CCDC174Q6PII3 467 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.58□□□□□ -1.52
RTN4-213ENST00000485749 RBBP8NLQ8NC74 664 aaPredicted RBP5.58□□□□□ -1.52
RTN4-213ENST00000485749 C1orf131Q8NDD1 294 aaKnown RBP5.58□□□□□ -1.52
RTN4-213ENST00000485749 SNRNP27Q8WVK2 155 aaKnown RBP5.58□□□□□ -1.52
RTN4-213ENST00000485749 NECAB3Q96P71 396 aaPredicted RBP5.58□□□□□ -1.52
RTN4-213ENST00000485749 CRBNQ96SW2 442 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 FEZ1Q99689 392 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 METTL22Q9BUU2 404 aaPredicted RBP5.58□□□□□ -1.52
RTN4-213ENST00000485749 YIPF2Q9BWQ6 316 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 RSPH9Q9H1X1 276 aaPredicted RBP5.58□□□□□ -1.52
RTN4-213ENST00000485749 CYP4F12Q9HCS2 524 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 PIM2Q9P1W9 311 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 SFMBT1Q9UHJ3 866 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 LEMD3Q9Y2U8 911 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 SCINQ9Y6U3 715 aa5.58□□□□□ -1.52
RTN4-213ENST00000485749 CFAP69A5D8W1 941 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 MEGF11A6BM72 1044 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 PRR19A6NJB7 356 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 VDRP11473 427 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 TFE3P19532 575 aaPredicted RBP5.57□□□□□ -1.52
RTN4-213ENST00000485749 MMP14P50281 582 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 CASP7P55210 303 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 MPP2Q14168 576 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 MAP3K11Q16584 847 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 FXNQ16595 210 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 C2orf27AQ580R0 203 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 TPTE2Q6XPS3 522 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 OTUD6BQ8N6M0 293 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 THAP3Q8WTV1 239 aaPredicted RBP5.57□□□□□ -1.52
RTN4-213ENST00000485749 GATAD2BQ8WXI9 593 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 JDP2Q8WYK2 163 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 KLHDC7BQ96G42 594 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 LATS2Q9NRM7 1088 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 DZANK1Q9NVP4 752 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 KCNK4Q9NYG8 393 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 MAP3K20Q9NYL2 800 aaKnown RBP5.57□□□□□ -1.52
RTN4-213ENST00000485749 ACTR10Q9NZ32 417 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 NRBP1Q9UHY1 535 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 HDAC5Q9UQL6 1122 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 TLR6Q9Y2C9 796 aa5.57□□□□□ -1.52
RTN4-213ENST00000485749 SAMM50Q9Y512 469 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms