RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 WDR18Q9BV38 432 aa18.33■□□□□ 0.52
RPUSD3-217ENST00000485705 USP26Q9BXU7 913 aa18.33■□□□□ 0.52
RPUSD3-217ENST00000485705 THSD7BQ9C0I4 1608 aa18.33■□□□□ 0.52
RPUSD3-217ENST00000485705 A0A1W2PRG0 241 aa18.32■□□□□ 0.52
RPUSD3-217ENST00000485705 TSPY2A6NKD2 308 aa18.32■□□□□ 0.52
RPUSD3-217ENST00000485705 E7EWF7 191 aa18.32■□□□□ 0.52
RPUSD3-217ENST00000485705 CXCL11O14625 94 aa18.32■□□□□ 0.52
RPUSD3-217ENST00000485705 NMT2O60551 498 aa18.32■□□□□ 0.52
RPUSD3-217ENST00000485705 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
RPUSD3-217ENST00000485705 CEP95Q96GE4 821 aa18.32■□□□□ 0.52
RPUSD3-217ENST00000485705 AS3MTQ9HBK9 375 aa18.32■□□□□ 0.52
RPUSD3-217ENST00000485705 IL17RBQ9NRM6 502 aa18.32■□□□□ 0.52
RPUSD3-217ENST00000485705 PLIN4Q96Q06 1357 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 KDM4AO75164 1064 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 EEF2P13639 858 aaKnown RBP18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 MAP2K2P36507 400 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 GTF2A2P52657 109 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 ATP2B2Q01814 1243 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 ICA1Q05084 483 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 SNAPC2Q13487 334 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 MTMR2Q13614 643 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 MOGSQ13724 837 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 BRI3BPQ8WY22 251 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 PTPN18Q99952 460 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 KANSL2Q9H9L4 492 aa18.31■□□□□ 0.52
RPUSD3-217ENST00000485705 CCL15-CCL14A0A0B4J2E2 113 aa18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 A0A0G2JLL6 359 aaPredicted RBP18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 MANSC4A6NHS7 340 aaPredicted RBP18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 HSPA4P34932 840 aa18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 HMGCS2P54868 508 aa18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 BACE1P56817 501 aa18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 ZYXQ15942 572 aaKnown RBP18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 CCL15Q16663 113 aa18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 CYB5R4Q7L1T6 521 aa18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 PRRT2Q7Z6L0 340 aaPredicted RBP18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 ESR2Q92731 530 aa18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 ZKSCAN3Q9BRR0 538 aa18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 TBC1D2Q9BYX2 928 aa18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 MTMR4Q9NYA4 1195 aa18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 ZSWIM5Q9P217 1185 aa18.3■□□□□ 0.52
RPUSD3-217ENST00000485705 TESPA1A2RU30 521 aaPredicted RBP18.29■□□□□ 0.52
RPUSD3-217ENST00000485705 USP17L10C9JJH3 530 aa18.29■□□□□ 0.52
RPUSD3-217ENST00000485705 CETPP11597 493 aa18.29■□□□□ 0.52
RPUSD3-217ENST00000485705 KCNB2Q92953 911 aa18.29■□□□□ 0.52
RPUSD3-217ENST00000485705 FEZ1Q99689 392 aa18.29■□□□□ 0.52
RPUSD3-217ENST00000485705 KRT23Q9C075 422 aa18.29■□□□□ 0.52
RPUSD3-217ENST00000485705 LOC285556D6RIA3 1793 aa18.28■□□□□ 0.52
RPUSD3-217ENST00000485705 IGF2BP3O00425 579 aaKnown RBP eCLIP18.28■□□□□ 0.52
RPUSD3-217ENST00000485705 TM4SF4P48230 202 aa18.28■□□□□ 0.52
RPUSD3-217ENST00000485705 SH3D19Q5HYK7 790 aa18.28■□□□□ 0.52
RPUSD3-217ENST00000485705 KIAA1755Q5JYT7 1200 aa18.28■□□□□ 0.52
RPUSD3-217ENST00000485705 RNF20Q5VTR2 975 aa18.28■□□□□ 0.52
RPUSD3-217ENST00000485705 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
RPUSD3-217ENST00000485705 CNNM2Q9H8M5 875 aa18.28■□□□□ 0.52
RPUSD3-217ENST00000485705 EMILIN3Q9NT22 766 aa18.28■□□□□ 0.52
RPUSD3-217ENST00000485705 CLIP2Q9UDT6 1046 aa18.28■□□□□ 0.52
RPUSD3-217ENST00000485705 BTBD19C9JJ37 291 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 EPB41L2O43491 1005 aaKnown RBP18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 SREBF2Q12772 1141 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 TRDNQ13061 729 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 GPAT2Q6NUI2 795 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 CHST3Q7LGC8 479 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 MB21D2Q8IYB1 491 aaPredicted RBP18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 LRRC47Q8N1G4 583 aaKnown RBP18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 FAM43AQ8N2R8 423 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 NCOA7Q8NI08 942 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 KIAA1683Q9H0B3 1180 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 ARHGEF10LQ9HCE6 1279 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 TCP11L1Q9NUJ3 509 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 NYAP2Q9P242 653 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 TMX2Q9Y320 296 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 SNX14Q9Y5W7 946 aa18.27■□□□□ 0.52
RPUSD3-217ENST00000485705 C19orf81C9J6K1 198 aa18.26■□□□□ 0.51
RPUSD3-217ENST00000485705 TTLL1O95922 423 aa18.26■□□□□ 0.51
RPUSD3-217ENST00000485705 NOVP48745 357 aa18.26■□□□□ 0.51
RPUSD3-217ENST00000485705 TSGA10IPQ3SY00 556 aa18.26■□□□□ 0.51
RPUSD3-217ENST00000485705 TREML2Q5T2D2 321 aa18.26■□□□□ 0.51
RPUSD3-217ENST00000485705 RCSD1Q6JBY9 416 aa18.26■□□□□ 0.51
RPUSD3-217ENST00000485705 USP17L2Q6R6M4 530 aa18.26■□□□□ 0.51
RPUSD3-217ENST00000485705 RALYLQ86SE5 291 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-217ENST00000485705 IFNL1Q8IU54 200 aa18.26■□□□□ 0.51
RPUSD3-217ENST00000485705 STX8Q9UNK0 236 aa18.26■□□□□ 0.51
RPUSD3-217ENST00000485705 ZKSCAN1P17029 563 aaPredicted RBP18.25■□□□□ 0.51
RPUSD3-217ENST00000485705 INHBEP58166 350 aa18.25■□□□□ 0.51
RPUSD3-217ENST00000485705 ANTXR2P58335 489 aa18.25■□□□□ 0.51
RPUSD3-217ENST00000485705 FASTKD5Q7L8L6 764 aaKnown RBP18.25■□□□□ 0.51
RPUSD3-217ENST00000485705 JMYQ8N9B5 988 aa18.25■□□□□ 0.51
RPUSD3-217ENST00000485705 MKL1Q969V6 931 aa18.25■□□□□ 0.51
RPUSD3-217ENST00000485705 TMOD4Q9NZQ9 345 aa18.25■□□□□ 0.51
RPUSD3-217ENST00000485705 USP14P54578 494 aa18.24■□□□□ 0.51
RPUSD3-217ENST00000485705 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
RPUSD3-217ENST00000485705 REM2Q8IYK8 340 aaPredicted RBP18.24■□□□□ 0.51
RPUSD3-217ENST00000485705 SPICE1Q8N0Z3 855 aa18.24■□□□□ 0.51
RPUSD3-217ENST00000485705 C12orf42Q96LP6 360 aa18.24■□□□□ 0.51
RPUSD3-217ENST00000485705 ZSCAN10Q96SZ4 725 aaPredicted RBP18.24■□□□□ 0.51
RPUSD3-217ENST00000485705 VCPKMTQ9H867 229 aa18.24■□□□□ 0.51
RPUSD3-217ENST00000485705 VCAM1P19320 739 aa18.23■□□□□ 0.51
RPUSD3-217ENST00000485705 NT5C2P49902 561 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms