RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 CELF2O95319 508 aaKnown RBP18.65■□□□□ 0.58
APOE-205ENST00000485628 IREB2P48200 963 aaKnown RBP18.65■□□□□ 0.58
APOE-205ENST00000485628 VGLL4Q14135 290 aa18.65■□□□□ 0.58
APOE-205ENST00000485628 SEPT2Q15019 361 aa18.65■□□□□ 0.58
APOE-205ENST00000485628 CCDC178Q5BJE1 867 aa18.65■□□□□ 0.58
APOE-205ENST00000485628 ARMC9Q7Z3E5 817 aa18.65■□□□□ 0.58
APOE-205ENST00000485628 IQCA1Q86XH1 822 aa18.65■□□□□ 0.58
APOE-205ENST00000485628 TCEANC2Q96MN5 208 aa18.65■□□□□ 0.58
APOE-205ENST00000485628 KANSL2Q9H9L4 492 aa18.65■□□□□ 0.58
APOE-205ENST00000485628 SENP2Q9HC62 589 aa18.65■□□□□ 0.58
APOE-205ENST00000485628 GPHNQ9NQX3 736 aaPredicted RBP18.65■□□□□ 0.58
APOE-205ENST00000485628 TOMM22Q9NS69 142 aa18.65■□□□□ 0.58
APOE-205ENST00000485628 ANGEL1Q9UNK9 670 aaKnown RBP18.65■□□□□ 0.58
APOE-205ENST00000485628 PTPRAP18433 802 aa18.64■□□□□ 0.57
APOE-205ENST00000485628 NEK4P51957 841 aa18.64■□□□□ 0.57
APOE-205ENST00000485628 ANKRD13AQ8IZ07 590 aa18.64■□□□□ 0.57
APOE-205ENST00000485628 ZKSCAN3Q9BRR0 538 aa18.64■□□□□ 0.57
APOE-205ENST00000485628 WDR18Q9BV38 432 aa18.64■□□□□ 0.57
APOE-205ENST00000485628 CABP5Q9NP86 173 aa18.64■□□□□ 0.57
APOE-205ENST00000485628 SYNPO2Q9UMS6 1093 aa18.64■□□□□ 0.57
APOE-205ENST00000485628 TNKSO95271 1327 aa18.64■□□□□ 0.57
APOE-205ENST00000485628 MYH4Q9Y623 1939 aa18.63■□□□□ 0.57
APOE-205ENST00000485628 A0A1W2PRG0 241 aa18.63■□□□□ 0.57
APOE-205ENST00000485628 PRKG1Q13976 671 aa18.63■□□□□ 0.57
APOE-205ENST00000485628 Q6ZUG5 572 aa18.63■□□□□ 0.57
APOE-205ENST00000485628 TSHZ2Q9NRE2 1034 aa18.63■□□□□ 0.57
APOE-205ENST00000485628 PDRG1Q9NUG6 133 aa18.63■□□□□ 0.57
APOE-205ENST00000485628 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.63■□□□□ 0.57
APOE-205ENST00000485628 USP17L5A8MUK1 530 aa18.62■□□□□ 0.57
APOE-205ENST00000485628 UBE2Q2LH0YL09 131 aa18.62■□□□□ 0.57
APOE-205ENST00000485628 IFIT3O14879 490 aaKnown RBP18.62■□□□□ 0.57
APOE-205ENST00000485628 CD2BP2O95400 341 aaKnown RBP18.62■□□□□ 0.57
APOE-205ENST00000485628 TTLL1O95922 423 aa18.62■□□□□ 0.57
APOE-205ENST00000485628 PPP4R3BQ5MIZ7 849 aa18.62■□□□□ 0.57
APOE-205ENST00000485628 CLEC10AQ8IUN9 316 aa18.62■□□□□ 0.57
APOE-205ENST00000485628 TMTC2Q8N394 836 aa18.62■□□□□ 0.57
APOE-205ENST00000485628 C2orf69Q8N8R5 385 aa18.62■□□□□ 0.57
APOE-205ENST00000485628 CLMNQ96JQ2 1002 aa18.62■□□□□ 0.57
APOE-205ENST00000485628 LRRC2Q9BYS8 371 aa18.62■□□□□ 0.57
APOE-205ENST00000485628 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
APOE-205ENST00000485628 SPDYE5A6NIY4 337 aa18.61■□□□□ 0.57
APOE-205ENST00000485628 EEF2P13639 858 aaKnown RBP18.61■□□□□ 0.57
APOE-205ENST00000485628 AK2P54819 239 aa18.61■□□□□ 0.57
APOE-205ENST00000485628 TMEM67Q5HYA8 995 aa18.61■□□□□ 0.57
APOE-205ENST00000485628 SAPCD2Q86UD0 394 aa18.61■□□□□ 0.57
APOE-205ENST00000485628 TMEM47Q9BQJ4 181 aa18.61■□□□□ 0.57
APOE-205ENST00000485628 UBAC1Q9BSL1 405 aa18.61■□□□□ 0.57
APOE-205ENST00000485628 TMX2Q9Y320 296 aa18.61■□□□□ 0.57
APOE-205ENST00000485628 AFG3L2Q9Y4W6 797 aa18.61■□□□□ 0.57
APOE-205ENST00000485628 PTPRFP10586 1907 aa18.61■□□□□ 0.57
APOE-205ENST00000485628 MPHOSPH10O00566 681 aaKnown RBP18.6■□□□□ 0.57
APOE-205ENST00000485628 ICA1Q05084 483 aa18.6■□□□□ 0.57
APOE-205ENST00000485628 SART3Q15020 963 aaKnown RBP18.6■□□□□ 0.57
APOE-205ENST00000485628 SNX21Q969T3 373 aa18.6■□□□□ 0.57
APOE-205ENST00000485628 ZNF408Q9H9D4 720 aa18.6■□□□□ 0.57
APOE-205ENST00000485628 BRPF3Q9ULD4 1205 aa18.6■□□□□ 0.57
APOE-205ENST00000485628 TLL2Q9Y6L7 1015 aa18.6■□□□□ 0.57
APOE-205ENST00000485628 NID2Q14112 1375 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 SNHG28P0DPA3 235 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 TOP1P11387 765 aaKnown RBP18.59■□□□□ 0.57
APOE-205ENST00000485628 RCAN1P53805 252 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 PPATQ06203 517 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 TROAPQ12815 778 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 WTAPQ15007 396 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 RAB3GAP1Q15042 981 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 CCDC84Q86UT8 332 aaPredicted RBP18.59■□□□□ 0.57
APOE-205ENST00000485628 ERO1BQ86YB8 467 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 ACER1Q8TDN7 264 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 BRF1Q92994 677 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 HHIPL1Q96JK4 782 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 KIAA1683Q9H0B3 1180 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 CLIP2Q9UDT6 1046 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 KCNH4Q9UQ05 1017 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 CSADQ9Y600 493 aa18.59■□□□□ 0.57
APOE-205ENST00000485628 GJA5P36382 358 aa18.58■□□□□ 0.56
APOE-205ENST00000485628 ECE1P42892 770 aa18.58■□□□□ 0.56
APOE-205ENST00000485628 ANKRD1Q15327 319 aa18.58■□□□□ 0.56
APOE-205ENST00000485628 SH3D19Q5HYK7 790 aa18.58■□□□□ 0.56
APOE-205ENST00000485628 IFIT1BQ5T764 474 aaKnown RBP18.58■□□□□ 0.56
APOE-205ENST00000485628 GMCL1P1Q8NEA9 526 aa18.58■□□□□ 0.56
APOE-205ENST00000485628 ZNF274Q96GC6 653 aaPredicted RBP18.58■□□□□ 0.56
APOE-205ENST00000485628 MAP3K14Q99558 947 aa18.58■□□□□ 0.56
APOE-205ENST00000485628 PICK1Q9NRD5 415 aa18.58■□□□□ 0.56
APOE-205ENST00000485628 TPCN1Q9ULQ1 816 aa18.58■□□□□ 0.56
APOE-205ENST00000485628 HPS5Q9UPZ3 1129 aa18.58■□□□□ 0.56
APOE-205ENST00000485628 ERICH2A1L162 156 aa18.57■□□□□ 0.56
APOE-205ENST00000485628 TMEM88BA6NKF7 163 aa18.57■□□□□ 0.56
APOE-205ENST00000485628 PPIL2Q13356 520 aa18.57■□□□□ 0.56
APOE-205ENST00000485628 TTLL12Q14166 644 aaPredicted RBP18.57■□□□□ 0.56
APOE-205ENST00000485628 KIAA1755Q5JYT7 1200 aa18.57■□□□□ 0.56
APOE-205ENST00000485628 APOA5Q6Q788 366 aa18.57■□□□□ 0.56
APOE-205ENST00000485628 ZNF280CQ8ND82 737 aa18.57■□□□□ 0.56
APOE-205ENST00000485628 CNKSR2Q8WXI2 1034 aa18.57■□□□□ 0.56
APOE-205ENST00000485628 STX8Q9UNK0 236 aa18.57■□□□□ 0.56
APOE-205ENST00000485628 ZHX2Q9Y6X8 837 aa18.57■□□□□ 0.56
APOE-205ENST00000485628 ST18O60284 1047 aa18.56■□□□□ 0.56
APOE-205ENST00000485628 PDIA3P30101 505 aaKnown RBP18.56■□□□□ 0.56
APOE-205ENST00000485628 BACE1P56817 501 aa18.56■□□□□ 0.56
APOE-205ENST00000485628 APOBRQ0VD83 1088 aa18.56■□□□□ 0.56
APOE-205ENST00000485628 PNMA1Q8ND90 353 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms