RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 C12orf42Q96LP6 360 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 UBE2OQ9C0C9 1292 aaKnown RBP16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 RABGAP1Q9Y3P9 1069 aa16.76■□□□□ 0.27
SMARCD3-211ENST00000485592 DLL1O00548 723 aa16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 CCND3P30281 292 aaPredicted RBP16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 RAB3GAP1Q15042 981 aa16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 CCL14Q16627 93 aa16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 WDR78Q5VTH9 848 aa16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 TATDN1Q6P1N9 297 aa16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 FTSJ3Q8IY81 847 aaKnown RBP16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 MAGEB6Q8N7X4 407 aa16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 MIGA1Q8NAN2 632 aa16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 EHD4Q9H223 541 aa16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 C1orf115Q9H7X2 142 aa16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 SERPINB13Q9UIV8 391 aa16.75■□□□□ 0.27
SMARCD3-211ENST00000485592 COL6A1P12109 1028 aa16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 MAP2K5Q13163 448 aa16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 CERKLQ49MI3 558 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 MFSD14CQ5VZR4 134 aa16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 TMED8Q6PL24 325 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 TTC6Q86TZ1 520 aa16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 DEFB123Q8N688 67 aa16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 EDC3Q96F86 508 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 CCDC8Q9H0W5 538 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 CABP5Q9NP86 173 aa16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 TLR7Q9NYK1 1049 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 NOP58Q9Y2X3 529 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 IVNS1ABPQ9Y6Y0 642 aa16.74■□□□□ 0.27
SMARCD3-211ENST00000485592 MAP3K12Q12852 859 aa16.73■□□□□ 0.27
SMARCD3-211ENST00000485592 ABCB5Q2M3G0 1257 aa16.73■□□□□ 0.27
SMARCD3-211ENST00000485592 LHX8Q68G74 356 aa16.73■□□□□ 0.27
SMARCD3-211ENST00000485592 KIAA1683Q9H0B3 1180 aa16.73■□□□□ 0.27
SMARCD3-211ENST00000485592 NAV1Q8NEY1 1877 aa16.73■□□□□ 0.27
SMARCD3-211ENST00000485592 SLC15A5A6NIM6 579 aa16.72■□□□□ 0.27
SMARCD3-211ENST00000485592 CNMDO75829 334 aa16.72■□□□□ 0.27
SMARCD3-211ENST00000485592 VCAM1P19320 739 aa16.72■□□□□ 0.27
SMARCD3-211ENST00000485592 LRRC26Q2I0M4 334 aa16.72■□□□□ 0.27
SMARCD3-211ENST00000485592 CATSPERGQ6ZRH7 1159 aa16.72■□□□□ 0.27
SMARCD3-211ENST00000485592 ITPRIPQ8IWB1 547 aa16.72■□□□□ 0.27
SMARCD3-211ENST00000485592 EAF2Q96CJ1 260 aaPredicted RBP16.72■□□□□ 0.27
SMARCD3-211ENST00000485592 MSCO60682 206 aa16.71■□□□□ 0.27
SMARCD3-211ENST00000485592 PTPREP23469 700 aa16.71■□□□□ 0.27
SMARCD3-211ENST00000485592 POTEEQ6S8J3 1075 aa16.71■□□□□ 0.27
SMARCD3-211ENST00000485592 LBX2Q6XYB7 198 aa16.71■□□□□ 0.27
SMARCD3-211ENST00000485592 NDUFB9Q9Y6M9 179 aa16.71■□□□□ 0.27
SMARCD3-211ENST00000485592 POLR3DP05423 398 aaPredicted RBP16.7■□□□□ 0.26
SMARCD3-211ENST00000485592 ATP2B2Q01814 1243 aa16.7■□□□□ 0.26
SMARCD3-211ENST00000485592 Q7L0L9 218 aa16.7■□□□□ 0.26
SMARCD3-211ENST00000485592 ERC1Q8IUD2 1116 aa16.7■□□□□ 0.26
SMARCD3-211ENST00000485592 RPAP3Q9H6T3 665 aaPredicted RBP16.7■□□□□ 0.26
SMARCD3-211ENST00000485592 DDX20Q9UHI6 824 aaKnown RBP16.7■□□□□ 0.26
SMARCD3-211ENST00000485592 STXBP5LQ9Y2K9 1186 aa16.7■□□□□ 0.26
SMARCD3-211ENST00000485592 CNGA1P29973 690 aa16.69■□□□□ 0.26
SMARCD3-211ENST00000485592 MDM2Q00987 491 aaPredicted RBP16.69■□□□□ 0.26
SMARCD3-211ENST00000485592 GRB14Q14449 540 aa16.69■□□□□ 0.26
SMARCD3-211ENST00000485592 ACER1Q8TDN7 264 aa16.69■□□□□ 0.26
SMARCD3-211ENST00000485592 SENP6Q9GZR1 1112 aaPredicted RBP16.69■□□□□ 0.26
SMARCD3-211ENST00000485592 ANTXR1Q9H6X2 564 aa16.69■□□□□ 0.26
SMARCD3-211ENST00000485592 FLRT1Q9NZU1 646 aa16.69■□□□□ 0.26
SMARCD3-211ENST00000485592 BTBD7Q9P203 1132 aa16.69■□□□□ 0.26
SMARCD3-211ENST00000485592 LAMA3Q16787 3333 aa16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 ZNF236Q9UL36 1845 aa16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 MAGEB6P1A0A0J9YX57 407 aa16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 SPDYE16A6NNV3 312 aaPredicted RBP16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 HOXC6P09630 235 aa16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 SHMT1P34896 483 aa16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 AACSQ86V21 672 aa16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 LPAR1Q92633 364 aa16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 LBHD1Q9BQE6 289 aaPredicted RBP16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 MTMR10Q9NXD2 777 aa16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 PRKAG2Q9UGJ0 569 aa16.68■□□□□ 0.26
SMARCD3-211ENST00000485592 DNM1LO00429 736 aa16.67■□□□□ 0.26
SMARCD3-211ENST00000485592 MPHOSPH10O00566 681 aaKnown RBP16.67■□□□□ 0.26
SMARCD3-211ENST00000485592 PLCD1P51178 756 aa16.67■□□□□ 0.26
SMARCD3-211ENST00000485592 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
SMARCD3-211ENST00000485592 NPLOC4Q8TAT6 608 aa16.67■□□□□ 0.26
SMARCD3-211ENST00000485592 RIOK1Q9BRS2 568 aaKnown RBP16.67■□□□□ 0.26
SMARCD3-211ENST00000485592 CRNKL1Q9BZJ0 848 aaKnown RBP16.67■□□□□ 0.26
SMARCD3-211ENST00000485592 EXOC6BQ9Y2D4 811 aa16.67■□□□□ 0.26
SMARCD3-211ENST00000485592 MYH8P13535 1937 aa16.66■□□□□ 0.26
SMARCD3-211ENST00000485592 CYP2C19P33261 490 aa16.66■□□□□ 0.26
SMARCD3-211ENST00000485592 SEPT2Q15019 361 aa16.66■□□□□ 0.26
SMARCD3-211ENST00000485592 HSP90AB4PQ58FF6 505 aa16.66■□□□□ 0.26
SMARCD3-211ENST00000485592 DPP9Q86TI2 863 aa16.66■□□□□ 0.26
SMARCD3-211ENST00000485592 TANGO6Q9C0B7 1094 aa16.66■□□□□ 0.26
SMARCD3-211ENST00000485592 COL6A3P12111 3177 aa16.66■□□□□ 0.26
SMARCD3-211ENST00000485592 A0A0G2JMZ2 1700 aa16.65■□□□□ 0.26
SMARCD3-211ENST00000485592 RLBP1P12271 317 aa16.65■□□□□ 0.26
SMARCD3-211ENST00000485592 GUCY1A2P33402 732 aa16.65■□□□□ 0.26
SMARCD3-211ENST00000485592 ATN1P54259 1190 aaPredicted RBP16.65■□□□□ 0.26
SMARCD3-211ENST00000485592 GABPAQ06546 454 aa16.65■□□□□ 0.26
SMARCD3-211ENST00000485592 COG2Q14746 738 aa16.65■□□□□ 0.26
SMARCD3-211ENST00000485592 MCM9Q9NXL9 1143 aa16.65■□□□□ 0.26
SMARCD3-211ENST00000485592 SLC5A4Q9NY91 659 aa16.65■□□□□ 0.26
SMARCD3-211ENST00000485592 HOXC10Q9NYD6 342 aa16.65■□□□□ 0.26
SMARCD3-211ENST00000485592 STRNO43815 780 aa16.64■□□□□ 0.25
SMARCD3-211ENST00000485592 CYBAP13498 195 aa16.64■□□□□ 0.25
SMARCD3-211ENST00000485592 ADORA2AP29274 412 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms