RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 LRRCC1Q9C099 1032 aa31.07■■■□□ 2.56
HLA-F-227ENST00000485513 DCP1AQ9NPI6 582 aaPredicted RBP31.07■■■□□ 2.56
HLA-F-227ENST00000485513 USP17L15C9J2P7 530 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 USP17L13C9JLJ4 530 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 USP17L11C9JVI0 530 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 USP17L18D6R9N7 530 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 USP17L22D6RA61 530 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 USP17L17D6RBQ6 530 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 USP17L19D6RCP7 530 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 USP17L20D6RJB6 530 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 ADD2P35612 726 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 ERVK-9P63128 1117 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 ERVK-24P63145 666 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 USP17L24Q0WX57 530 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 ACER1Q8TDN7 264 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.06■■■□□ 2.56
HLA-F-227ENST00000485513 ARMT1Q9H993 441 aa31.06■■■□□ 2.56
HLA-F-227ENST00000485513 MAPK4P31152 587 aa31.05■■■□□ 2.56
HLA-F-227ENST00000485513 EVX2Q03828 476 aa31.05■■■□□ 2.56
HLA-F-227ENST00000485513 Q3C1V9 767 aa31.05■■■□□ 2.56
HLA-F-227ENST00000485513 CCAR1Q8IX12 1150 aaKnown RBP31.05■■■□□ 2.56
HLA-F-227ENST00000485513 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.05■■■□□ 2.56
HLA-F-227ENST00000485513 GUCY1A2P33402 732 aa31.04■■■□□ 2.56
HLA-F-227ENST00000485513 SOCS4Q8WXH5 440 aa31.04■■■□□ 2.56
HLA-F-227ENST00000485513 NUDT12Q9BQG2 462 aa31.04■■■□□ 2.56
HLA-F-227ENST00000485513 MBD4O95243 580 aa31.03■■■□□ 2.56
HLA-F-227ENST00000485513 VCAM1P19320 739 aa31.03■■■□□ 2.56
HLA-F-227ENST00000485513 CYP2B6P20813 491 aa31.03■■■□□ 2.56
HLA-F-227ENST00000485513 SEPT2Q15019 361 aa31.03■■■□□ 2.56
HLA-F-227ENST00000485513 SLFNL1Q499Z3 407 aa31.03■■■□□ 2.56
HLA-F-227ENST00000485513 POTEEQ6S8J3 1075 aa31.03■■■□□ 2.56
HLA-F-227ENST00000485513 CRISPLD2Q9H0B8 497 aa31.03■■■□□ 2.56
HLA-F-227ENST00000485513 MYH7P12883 1935 aa31.02■■■□□ 2.56
HLA-F-227ENST00000485513 MPHOSPH10O00566 681 aaKnown RBP31.02■■■□□ 2.56
HLA-F-227ENST00000485513 SMARCA5O60264 1052 aaPredicted RBP31.02■■■□□ 2.56
HLA-F-227ENST00000485513 CYP2D6P10635 497 aa31.02■■■□□ 2.56
HLA-F-227ENST00000485513 CATSPERGQ6ZRH7 1159 aa31.02■■■□□ 2.56
HLA-F-227ENST00000485513 PORCNQ9H237 461 aa31.02■■■□□ 2.56
HLA-F-227ENST00000485513 COLQQ9Y215 455 aaPredicted RBP31.02■■■□□ 2.56
HLA-F-227ENST00000485513 RABGAP1Q9Y3P9 1069 aa31.02■■■□□ 2.56
HLA-F-227ENST00000485513 RPTORQ8N122 1335 aa31.01■■■□□ 2.56
HLA-F-227ENST00000485513 TRIM32Q13049 653 aa31.01■■■□□ 2.55
HLA-F-227ENST00000485513 TRIB2Q92519 343 aa31.01■■■□□ 2.55
HLA-F-227ENST00000485513 HMX1Q9NP08 348 aaPredicted RBP31.01■■■□□ 2.55
HLA-F-227ENST00000485513 ATP8A2Q9NTI2 1148 aa31.01■■■□□ 2.55
HLA-F-227ENST00000485513 PRKAB2O43741 272 aa31■■■□□ 2.55
HLA-F-227ENST00000485513 XRCC5P13010 732 aaKnown RBP31■■■□□ 2.55
HLA-F-227ENST00000485513 GPR142Q7Z601 462 aa31■■■□□ 2.55
HLA-F-227ENST00000485513 SWAP70Q9UH65 585 aa31■■■□□ 2.55
HLA-F-227ENST00000485513 BAZ2AQ9UIF9 1905 aaKnown RBP31■■■□□ 2.55
HLA-F-227ENST00000485513 UBE3CQ15386 1083 aa30.99■■■□□ 2.55
HLA-F-227ENST00000485513 PLEKHH3Q7Z736 793 aa30.99■■■□□ 2.55
HLA-F-227ENST00000485513 SLC44A5Q8NCS7 719 aa30.99■■■□□ 2.55
HLA-F-227ENST00000485513 RPAP3Q9H6T3 665 aaPredicted RBP30.99■■■□□ 2.55
HLA-F-227ENST00000485513 CWC22Q9HCG8 908 aaKnown RBP30.99■■■□□ 2.55
HLA-F-227ENST00000485513 PCDH10Q9P2E7 1040 aa30.99■■■□□ 2.55
HLA-F-227ENST00000485513 MYH8P13535 1937 aa30.98■■■□□ 2.55
HLA-F-227ENST00000485513 CNMDO75829 334 aa30.98■■■□□ 2.55
HLA-F-227ENST00000485513 CCNA1P78396 465 aa30.98■■■□□ 2.55
HLA-F-227ENST00000485513 DYNLL2Q96FJ2 89 aa30.98■■■□□ 2.55
HLA-F-227ENST00000485513 CHGBP05060 677 aa30.97■■■□□ 2.55
HLA-F-227ENST00000485513 ZSCAN25Q6NSZ9 544 aa30.97■■■□□ 2.55
HLA-F-227ENST00000485513 TMEM179Q6ZVK1 233 aa30.97■■■□□ 2.55
HLA-F-227ENST00000485513 TRMT44Q8IYL2 757 aaKnown RBP30.97■■■□□ 2.55
HLA-F-227ENST00000485513 USP6NLQ92738 828 aa30.97■■■□□ 2.55
HLA-F-227ENST00000485513 NR2E3Q9Y5X4 410 aa30.97■■■□□ 2.55
HLA-F-227ENST00000485513 A0A1W2PRG0 241 aa30.96■■■□□ 2.55
HLA-F-227ENST00000485513 RGS2P41220 211 aa30.96■■■□□ 2.55
HLA-F-227ENST00000485513 MORN1Q5T089 497 aa30.96■■■□□ 2.55
HLA-F-227ENST00000485513 LBX2Q6XYB7 198 aa30.96■■■□□ 2.55
HLA-F-227ENST00000485513 ECHDC1Q9NTX5 307 aa30.96■■■□□ 2.55
HLA-F-227ENST00000485513 ZKSCAN1P17029 563 aaPredicted RBP30.95■■■□□ 2.55
HLA-F-227ENST00000485513 MAP3K21Q5TCX8 1036 aa30.95■■■□□ 2.55
HLA-F-227ENST00000485513 AMOTL1Q8IY63 956 aa30.95■■■□□ 2.55
HLA-F-227ENST00000485513 DDRGK1Q96HY6 314 aa30.95■■■□□ 2.55
HLA-F-227ENST00000485513 PAWRQ96IZ0 340 aaKnown RBP30.95■■■□□ 2.55
HLA-F-227ENST00000485513 GLRX3O76003 335 aaKnown RBP30.94■■■□□ 2.54
HLA-F-227ENST00000485513 PRKAR2AP13861 404 aaKnown RBP30.94■■■□□ 2.54
HLA-F-227ENST00000485513 C12orf60Q5U649 245 aa30.94■■■□□ 2.54
HLA-F-227ENST00000485513 ANKLE1Q8NAG6 615 aa30.94■■■□□ 2.54
HLA-F-227ENST00000485513 APBA2Q99767 749 aa30.94■■■□□ 2.54
HLA-F-227ENST00000485513 DCTPP1Q9H773 170 aa30.94■■■□□ 2.54
HLA-F-227ENST00000485513 SPDYE16A6NNV3 312 aaPredicted RBP30.93■■■□□ 2.54
HLA-F-227ENST00000485513 USP17L12C9JPN9 530 aa30.93■■■□□ 2.54
HLA-F-227ENST00000485513 USP17L21D6R901 530 aa30.93■■■□□ 2.54
HLA-F-227ENST00000485513 WDR78Q5VTH9 848 aa30.93■■■□□ 2.54
HLA-F-227ENST00000485513 CHRDL2Q6WN34 429 aa30.93■■■□□ 2.54
HLA-F-227ENST00000485513 NECAB2Q7Z6G3 386 aa30.93■■■□□ 2.54
HLA-F-227ENST00000485513 BTBD7Q9P203 1132 aa30.93■■■□□ 2.54
HLA-F-227ENST00000485513 SLC4A4Q9Y6R1 1079 aa30.93■■■□□ 2.54
HLA-F-227ENST00000485513 TRIOBPQ9H2D6 2365 aa30.93■■■□□ 2.54
HLA-F-227ENST00000485513 CYP2D7A0A087X1C5 515 aa30.92■■■□□ 2.54
HLA-F-227ENST00000485513 AKR1B1P15121 316 aa30.92■■■□□ 2.54
HLA-F-227ENST00000485513 DIS3LQ8TF46 1054 aaKnown RBP30.92■■■□□ 2.54
HLA-F-227ENST00000485513 GPATCH3Q96I76 525 aa30.92■■■□□ 2.54
HLA-F-227ENST00000485513 PUS7LQ9H0K6 701 aaKnown RBP30.92■■■□□ 2.54
HLA-F-227ENST00000485513 EVI5O60447 810 aa30.91■■■□□ 2.54
HLA-F-227ENST00000485513 CDK8P49336 464 aa30.91■■■□□ 2.54
HLA-F-227ENST00000485513 FXR1P51114 621 aaKnown RBP eCLIP30.91■■■□□ 2.54
HLA-F-227ENST00000485513 MAP2K5Q13163 448 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms