RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 SBNO2Q9Y2G9 1366 aa7.65□□□□□ -1.18
SRRM1-213ENST00000485441 HSD3B2P26439 372 aa7.64□□□□□ -1.19
SRRM1-213ENST00000485441 IREB2P48200 963 aaKnown RBP7.64□□□□□ -1.19
SRRM1-213ENST00000485441 PMS1P54277 932 aaKnown RBP7.64□□□□□ -1.19
SRRM1-213ENST00000485441 NRG1Q02297 640 aaPredicted RBP7.64□□□□□ -1.19
SRRM1-213ENST00000485441 SPATC1Q76KD6 591 aa7.64□□□□□ -1.19
SRRM1-213ENST00000485441 PPFIBP1Q86W92 1011 aa7.64□□□□□ -1.19
SRRM1-213ENST00000485441 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.64□□□□□ -1.19
SRRM1-213ENST00000485441 CEP41Q9BYV8 373 aa7.64□□□□□ -1.19
SRRM1-213ENST00000485441 PIDD1Q9HB75 910 aa7.64□□□□□ -1.19
SRRM1-213ENST00000485441 SUCOQ9UBS9 1254 aaKnown RBP7.64□□□□□ -1.19
SRRM1-213ENST00000485441 SUSD2Q9UGT4 822 aa7.64□□□□□ -1.19
SRRM1-213ENST00000485441 ZMYM5Q9UJ78 669 aa7.64□□□□□ -1.19
SRRM1-213ENST00000485441 FAM86C2PA6NEL3 165 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 SLC7A5Q01650 507 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 MBTPS1Q14703 1052 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 KIAA1211LQ6NV74 962 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.63□□□□□ -1.19
SRRM1-213ENST00000485441 ARMCX6Q7L4S7 300 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 PHACTR4Q8IZ21 702 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 ARMC10Q8N2F6 343 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 MFSD2AQ8NA29 543 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 DNAJB8Q8NHS0 232 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 SH3TC2Q8TF17 1288 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 SCARF2Q96GP6 870 aaPredicted RBP7.63□□□□□ -1.19
SRRM1-213ENST00000485441 DHRS1Q96LJ7 313 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 SLC6A18Q96N87 628 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 SEMA6CQ9H3T2 930 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 CEP131Q9UPN4 1083 aa7.63□□□□□ -1.19
SRRM1-213ENST00000485441 C9IYK1 514 aa7.62□□□□□ -1.19
SRRM1-213ENST00000485441 DYNC1LI2O43237 492 aaPredicted RBP7.62□□□□□ -1.19
SRRM1-213ENST00000485441 DIAPH1O60610 1272 aaKnown RBP7.62□□□□□ -1.19
SRRM1-213ENST00000485441 IFRD2Q12894 506 aaPredicted RBP7.62□□□□□ -1.19
SRRM1-213ENST00000485441 SQSTM1Q13501 440 aa7.62□□□□□ -1.19
SRRM1-213ENST00000485441 GNPTABQ3T906 1256 aa7.62□□□□□ -1.19
SRRM1-213ENST00000485441 RIN3Q8TB24 985 aa7.62□□□□□ -1.19
SRRM1-213ENST00000485441 PUS7Q96PZ0 661 aaKnown RBP7.62□□□□□ -1.19
SRRM1-213ENST00000485441 NACC1Q96RE7 527 aa7.62□□□□□ -1.19
SRRM1-213ENST00000485441 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.62□□□□□ -1.19
SRRM1-213ENST00000485441 USP21Q9UK80 565 aa7.62□□□□□ -1.19
SRRM1-213ENST00000485441 SUSD5O60279 629 aa7.61□□□□□ -1.19
SRRM1-213ENST00000485441 NFICP08651 508 aa7.61□□□□□ -1.19
SRRM1-213ENST00000485441 GLB1P16278 677 aa7.61□□□□□ -1.19
SRRM1-213ENST00000485441 SLC10A6Q3KNW5 377 aa7.61□□□□□ -1.19
SRRM1-213ENST00000485441 MTERF2Q49AM1 385 aa7.61□□□□□ -1.19
SRRM1-213ENST00000485441 ANKRD39Q53RE8 183 aa7.61□□□□□ -1.19
SRRM1-213ENST00000485441 SGO2Q562F6 1265 aa7.61□□□□□ -1.19
SRRM1-213ENST00000485441 PLEKHG4Q58EX7 1191 aa7.61□□□□□ -1.19
SRRM1-213ENST00000485441 EEPD1Q7L9B9 569 aa7.61□□□□□ -1.19
SRRM1-213ENST00000485441 ZNF513Q8N8E2 541 aaPredicted RBP7.61□□□□□ -1.19
SRRM1-213ENST00000485441 FBLIM1Q8WUP2 373 aa7.61□□□□□ -1.19
SRRM1-213ENST00000485441 MEGF10Q96KG7 1140 aa7.61□□□□□ -1.19
SRRM1-213ENST00000485441 SSBP4Q9BWG4 385 aaPredicted RBP7.61□□□□□ -1.19
SRRM1-213ENST00000485441 SART1O43290 800 aaKnown RBP7.6□□□□□ -1.19
SRRM1-213ENST00000485441 SLITRK5O94991 958 aa7.6□□□□□ -1.19
SRRM1-213ENST00000485441 CAPNS1P04632 268 aa7.6□□□□□ -1.19
SRRM1-213ENST00000485441 GBP1P32455 592 aa7.6□□□□□ -1.19
SRRM1-213ENST00000485441 USP11P51784 963 aa7.6□□□□□ -1.19
SRRM1-213ENST00000485441 UVSSAQ2YD98 709 aa7.6□□□□□ -1.19
SRRM1-213ENST00000485441 BBS9Q3SYG4 887 aa7.6□□□□□ -1.19
SRRM1-213ENST00000485441 NBPF12Q5TAG4 269 aaPredicted RBP7.6□□□□□ -1.19
SRRM1-213ENST00000485441 ALYREFQ86V81 257 aaKnown RBP7.6□□□□□ -1.19
SRRM1-213ENST00000485441 MYRFLQ96LU7 910 aa7.6□□□□□ -1.19
SRRM1-213ENST00000485441 EPN3Q9H201 632 aa7.6□□□□□ -1.19
SRRM1-213ENST00000485441 SSU72Q9NP77 194 aaKnown RBP7.6□□□□□ -1.19
SRRM1-213ENST00000485441 C1GALT1Q9NS00 363 aa7.6□□□□□ -1.19
SRRM1-213ENST00000485441 TMEM260Q9NX78 707 aa7.6□□□□□ -1.19
SRRM1-213ENST00000485441 KDM2BQ8NHM5 1336 aa7.59□□□□□ -1.19
SRRM1-213ENST00000485441 RBAK-RBAKDNI3L0D1 243 aa7.59□□□□□ -1.19
SRRM1-213ENST00000485441 CBFA2T2O43439 604 aa7.59□□□□□ -1.19
SRRM1-213ENST00000485441 ADCY3O60266 1144 aa7.59□□□□□ -1.19
SRRM1-213ENST00000485441 APBA3O96018 575 aa7.59□□□□□ -1.19
SRRM1-213ENST00000485441 RAB6AP20340 208 aa7.59□□□□□ -1.19
SRRM1-213ENST00000485441 C2orf27AQ580R0 203 aa7.59□□□□□ -1.19
SRRM1-213ENST00000485441 AXDND1Q5T1B0 1012 aaPredicted RBP7.59□□□□□ -1.19
SRRM1-213ENST00000485441 XAGE3Q8WTP9 111 aa7.59□□□□□ -1.19
SRRM1-213ENST00000485441 THAP3Q8WTV1 239 aaPredicted RBP7.59□□□□□ -1.19
SRRM1-213ENST00000485441 LEMD3Q9Y2U8 911 aa7.59□□□□□ -1.19
SRRM1-213ENST00000485441 CNTNAP4Q9C0A0 1308 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 ESYT3A0FGR9 886 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 CLEC3AO75596 197 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 ZNF143P52747 638 aaPredicted RBP7.58□□□□□ -1.2
SRRM1-213ENST00000485441 INSM1Q01101 510 aaPredicted RBP7.58□□□□□ -1.2
SRRM1-213ENST00000485441 LETMD1Q6P1Q0 360 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 FAM214BQ7L5A3 538 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 CDH24Q86UP0 819 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 TXNRD3Q86VQ6 643 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 FAM20CQ8IXL6 584 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 SMARCC1Q92922 1105 aaPredicted RBP7.58□□□□□ -1.2
SRRM1-213ENST00000485441 KLHL25Q9H0H3 589 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 FANCLQ9NW38 375 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 PFDN2Q9UHV9 154 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 DAGLAQ9Y4D2 1042 aa7.58□□□□□ -1.2
SRRM1-213ENST00000485441 SHOXO15266 292 aa7.57□□□□□ -1.2
SRRM1-213ENST00000485441 GAS2O43903 313 aaKnown RBP7.57□□□□□ -1.2
SRRM1-213ENST00000485441 EOMESO95936 686 aa7.57□□□□□ -1.2
SRRM1-213ENST00000485441 TP53P04637 393 aaPredicted RBP7.57□□□□□ -1.2
SRRM1-213ENST00000485441 BMP3P12645 472 aa7.57□□□□□ -1.2
SRRM1-213ENST00000485441 MAP4P27816 1152 aaKnown RBP7.57□□□□□ -1.2
SRRM1-213ENST00000485441 CHMP4BP1P59074 171 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms