RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 DNAJC2Q99543 621 aaKnown RBP23.35■■□□□ 1.33
COL27A1-205ENST00000485397 PRO3102Q9H379 93 aa23.35■■□□□ 1.33
COL27A1-205ENST00000485397 ZNF532Q9HCE3 1301 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 USP17L15C9J2P7 530 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 USP17L13C9JLJ4 530 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 USP17L11C9JVI0 530 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 USP17L18D6R9N7 530 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 USP17L22D6RA61 530 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 USP17L17D6RBQ6 530 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 USP17L19D6RCP7 530 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 USP17L20D6RJB6 530 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 IFIT2P09913 472 aaKnown RBP23.34■■□□□ 1.33
COL27A1-205ENST00000485397 USP17L24Q0WX57 530 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 PDE3AQ14432 1141 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 GPR142Q7Z601 462 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 CCAR1Q8IX12 1150 aaKnown RBP23.34■■□□□ 1.33
COL27A1-205ENST00000485397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.34■■□□□ 1.33
COL27A1-205ENST00000485397 USP6NLQ92738 828 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 EDC3Q96F86 508 aaKnown RBP23.34■■□□□ 1.33
COL27A1-205ENST00000485397 CABP5Q9NP86 173 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 ZBTB40Q9NUA8 1239 aa23.34■■□□□ 1.33
COL27A1-205ENST00000485397 CNMDO75829 334 aa23.33■■□□□ 1.33
COL27A1-205ENST00000485397 XRCC5P13010 732 aaKnown RBP23.33■■□□□ 1.33
COL27A1-205ENST00000485397 PRKAR2AP13861 404 aaKnown RBP23.33■■□□□ 1.33
COL27A1-205ENST00000485397 GUCY1A2P33402 732 aa23.33■■□□□ 1.33
COL27A1-205ENST00000485397 USP14P54578 494 aa23.33■■□□□ 1.33
COL27A1-205ENST00000485397 GABPAQ06546 454 aa23.33■■□□□ 1.33
COL27A1-205ENST00000485397 MAP3K21Q5TCX8 1036 aa23.33■■□□□ 1.33
COL27A1-205ENST00000485397 CATSPERGQ6ZRH7 1159 aa23.33■■□□□ 1.33
COL27A1-205ENST00000485397 PLEKHH3Q7Z736 793 aa23.33■■□□□ 1.33
COL27A1-205ENST00000485397 ANKLE1Q8NAG6 615 aa23.33■■□□□ 1.33
COL27A1-205ENST00000485397 CRNKL1Q9BZJ0 848 aaKnown RBP23.33■■□□□ 1.33
COL27A1-205ENST00000485397 KIAA1683Q9H0B3 1180 aa23.33■■□□□ 1.33
COL27A1-205ENST00000485397 MCM9Q9NXL9 1143 aa23.33■■□□□ 1.33
COL27A1-205ENST00000485397 DDX19BQ9UMR2 479 aa23.33■■□□□ 1.33
COL27A1-205ENST00000485397 TCRBV5S4A2TA0A5A2 114 aa23.32■■□□□ 1.32
COL27A1-205ENST00000485397 HMMRO75330 724 aa23.32■■□□□ 1.32
COL27A1-205ENST00000485397 VCAM1P19320 739 aa23.32■■□□□ 1.32
COL27A1-205ENST00000485397 MNX1P50219 401 aaPredicted RBP23.32■■□□□ 1.32
COL27A1-205ENST00000485397 CCL14Q16627 93 aa23.32■■□□□ 1.32
COL27A1-205ENST00000485397 MORN1Q5T089 497 aa23.32■■□□□ 1.32
COL27A1-205ENST00000485397 SDR42E1Q8WUS8 393 aa23.32■■□□□ 1.32
COL27A1-205ENST00000485397 RABGAP1Q9Y3P9 1069 aa23.32■■□□□ 1.32
COL27A1-205ENST00000485397 ZKSCAN1P17029 563 aaPredicted RBP23.31■■□□□ 1.32
COL27A1-205ENST00000485397 RGS2P41220 211 aa23.31■■□□□ 1.32
COL27A1-205ENST00000485397 SEPT2Q15019 361 aa23.31■■□□□ 1.32
COL27A1-205ENST00000485397 LCORLQ8N3X6 602 aa23.31■■□□□ 1.32
COL27A1-205ENST00000485397 OGDHLQ9ULD0 1010 aa23.31■■□□□ 1.32
COL27A1-205ENST00000485397 RAB11FIP3O75154 756 aa23.3■■□□□ 1.32
COL27A1-205ENST00000485397 CYP2D6P10635 497 aa23.3■■□□□ 1.32
COL27A1-205ENST00000485397 CACNB2Q08289 660 aaPredicted RBP23.3■■□□□ 1.32
COL27A1-205ENST00000485397 SLFNL1Q499Z3 407 aa23.3■■□□□ 1.32
COL27A1-205ENST00000485397 NBPF3Q9H094 633 aa23.3■■□□□ 1.32
COL27A1-205ENST00000485397 BOLA2Q9H3K6 86 aa23.3■■□□□ 1.32
COL27A1-205ENST00000485397 CWC22Q9HCG8 908 aaKnown RBP23.3■■□□□ 1.32
COL27A1-205ENST00000485397 DCP1AQ9NPI6 582 aaPredicted RBP23.3■■□□□ 1.32
COL27A1-205ENST00000485397 DDX60LQ5H9U9 1706 aaKnown RBP23.3■■□□□ 1.32
COL27A1-205ENST00000485397 TRMT44Q8IYL2 757 aaKnown RBP23.29■■□□□ 1.32
COL27A1-205ENST00000485397 RPAP3Q9H6T3 665 aaPredicted RBP23.29■■□□□ 1.32
COL27A1-205ENST00000485397 ARMT1Q9H993 441 aa23.29■■□□□ 1.32
COL27A1-205ENST00000485397 BTBD7Q9P203 1132 aa23.29■■□□□ 1.32
COL27A1-205ENST00000485397 STAP2Q9UGK3 403 aa23.29■■□□□ 1.32
COL27A1-205ENST00000485397 ALPK3Q96L96 1907 aa23.28■■□□□ 1.32
COL27A1-205ENST00000485397 MPHOSPH10O00566 681 aaKnown RBP23.28■■□□□ 1.32
COL27A1-205ENST00000485397 MAP2K5Q13163 448 aa23.28■■□□□ 1.32
COL27A1-205ENST00000485397 C7orf61Q8IZ16 206 aa23.28■■□□□ 1.32
COL27A1-205ENST00000485397 SLC44A5Q8NCS7 719 aa23.28■■□□□ 1.32
COL27A1-205ENST00000485397 APBA2Q99767 749 aa23.28■■□□□ 1.32
COL27A1-205ENST00000485397 C11orf49Q9H6J7 331 aa23.28■■□□□ 1.32
COL27A1-205ENST00000485397 NAV1Q8NEY1 1877 aa23.28■■□□□ 1.32
COL27A1-205ENST00000485397 A0A1W2PRG0 241 aa23.27■■□□□ 1.32
COL27A1-205ENST00000485397 SPDYE16A6NNV3 312 aaPredicted RBP23.27■■□□□ 1.32
COL27A1-205ENST00000485397 PRKAB2O43741 272 aa23.27■■□□□ 1.32
COL27A1-205ENST00000485397 CCND3P30281 292 aaPredicted RBP23.27■■□□□ 1.32
COL27A1-205ENST00000485397 CCNA1P78396 465 aa23.27■■□□□ 1.32
COL27A1-205ENST00000485397 WDR78Q5VTH9 848 aa23.27■■□□□ 1.32
COL27A1-205ENST00000485397 PAG1Q9NWQ8 432 aa23.27■■□□□ 1.32
COL27A1-205ENST00000485397 CHGBP05060 677 aa23.26■■□□□ 1.31
COL27A1-205ENST00000485397 ADD2P35612 726 aa23.26■■□□□ 1.31
COL27A1-205ENST00000485397 LBX2Q6XYB7 198 aa23.26■■□□□ 1.31
COL27A1-205ENST00000485397 DYNLL2Q96FJ2 89 aa23.26■■□□□ 1.31
COL27A1-205ENST00000485397 ZMYND8Q9ULU4 1186 aaPredicted RBP23.26■■□□□ 1.31
COL27A1-205ENST00000485397 MBD4O95243 580 aa23.25■■□□□ 1.31
COL27A1-205ENST00000485397 ATP5JP18859 108 aa23.25■■□□□ 1.31
COL27A1-205ENST00000485397 PTPREP23469 700 aa23.25■■□□□ 1.31
COL27A1-205ENST00000485397 LHX8Q68G74 356 aa23.25■■□□□ 1.31
COL27A1-205ENST00000485397 FLRT1Q9NZU1 646 aa23.25■■□□□ 1.31
COL27A1-205ENST00000485397 RCAN3Q9UKA8 241 aa23.25■■□□□ 1.31
COL27A1-205ENST00000485397 SLC15A5A6NIM6 579 aa23.24■■□□□ 1.31
COL27A1-205ENST00000485397 SMIM22K7EJ46 135 aa23.24■■□□□ 1.31
COL27A1-205ENST00000485397 GLRX3O76003 335 aaKnown RBP23.24■■□□□ 1.31
COL27A1-205ENST00000485397 KIAA1755Q5JYT7 1200 aa23.23■■□□□ 1.31
COL27A1-205ENST00000485397 C20orf194Q5TEA3 1177 aa23.23■■□□□ 1.31
COL27A1-205ENST00000485397 HAUS7Q99871 368 aa23.23■■□□□ 1.31
COL27A1-205ENST00000485397 CHMP4BQ9H444 224 aaKnown RBP23.23■■□□□ 1.31
COL27A1-205ENST00000485397 SWAP70Q9UH65 585 aa23.23■■□□□ 1.31
COL27A1-205ENST00000485397 PFASO15067 1338 aa23.23■■□□□ 1.31
COL27A1-205ENST00000485397 CYP2D7A0A087X1C5 515 aa23.22■■□□□ 1.31
COL27A1-205ENST00000485397 AKR1B1P15121 316 aa23.22■■□□□ 1.31
COL27A1-205ENST00000485397 COG2Q14746 738 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms