RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 KIAA1683Q9H0B3 1180 aa15.89■□□□□ 0.13
HDAC6-227ENST00000485102 SERPINB13Q9UIV8 391 aa15.89■□□□□ 0.13
HDAC6-227ENST00000485102 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-227ENST00000485102 GLRX3O76003 335 aaKnown RBP15.88■□□□□ 0.13
HDAC6-227ENST00000485102 HOXC6P09630 235 aa15.88■□□□□ 0.13
HDAC6-227ENST00000485102 MAGEA10P43363 369 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-227ENST00000485102 MAP2K5Q13163 448 aa15.88■□□□□ 0.13
HDAC6-227ENST00000485102 CATSPERGQ6ZRH7 1159 aa15.88■□□□□ 0.13
HDAC6-227ENST00000485102 TTC6Q86TZ1 520 aa15.88■□□□□ 0.13
HDAC6-227ENST00000485102 CCAR1Q8IX12 1150 aaKnown RBP15.88■□□□□ 0.13
HDAC6-227ENST00000485102 TDHQ8IZJ6 230 aa15.88■□□□□ 0.13
HDAC6-227ENST00000485102 SLC17A8Q8NDX2 589 aa15.88■□□□□ 0.13
HDAC6-227ENST00000485102 SAP30BPQ9UHR5 308 aaKnown RBP15.88■□□□□ 0.13
HDAC6-227ENST00000485102 SLC15A5A6NIM6 579 aa15.87■□□□□ 0.13
HDAC6-227ENST00000485102 CNMDO75829 334 aa15.87■□□□□ 0.13
HDAC6-227ENST00000485102 IGHA2P01877 340 aa15.87■□□□□ 0.13
HDAC6-227ENST00000485102 CCL14Q16627 93 aa15.87■□□□□ 0.13
HDAC6-227ENST00000485102 EDC3Q96F86 508 aaKnown RBP15.87■□□□□ 0.13
HDAC6-227ENST00000485102 PAGR1Q9BTK6 254 aa15.87■□□□□ 0.13
HDAC6-227ENST00000485102 IDH1O75874 414 aaKnown RBP15.86■□□□□ 0.13
HDAC6-227ENST00000485102 PTPREP23469 700 aa15.86■□□□□ 0.13
HDAC6-227ENST00000485102 CCND3P30281 292 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-227ENST00000485102 USP5P45974 858 aa15.86■□□□□ 0.13
HDAC6-227ENST00000485102 MAP3K12Q12852 859 aa15.86■□□□□ 0.13
HDAC6-227ENST00000485102 CERKLQ49MI3 558 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-227ENST00000485102 CCDC8Q9H0W5 538 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-227ENST00000485102 TLR7Q9NYK1 1049 aaKnown RBP15.86■□□□□ 0.13
HDAC6-227ENST00000485102 MSCO60682 206 aa15.85■□□□□ 0.13
HDAC6-227ENST00000485102 SYN1P17600 705 aa15.85■□□□□ 0.13
HDAC6-227ENST00000485102 VCAM1P19320 739 aa15.85■□□□□ 0.13
HDAC6-227ENST00000485102 GABPAQ06546 454 aa15.85■□□□□ 0.13
HDAC6-227ENST00000485102 ABCB5Q2M3G0 1257 aa15.85■□□□□ 0.13
HDAC6-227ENST00000485102 MFSD14CQ5VZR4 134 aa15.85■□□□□ 0.13
HDAC6-227ENST00000485102 MAGEB6Q8N7X4 407 aa15.85■□□□□ 0.13
HDAC6-227ENST00000485102 MIGA1Q8NAN2 632 aa15.85■□□□□ 0.13
HDAC6-227ENST00000485102 RIOK1Q9BRS2 568 aaKnown RBP15.85■□□□□ 0.13
HDAC6-227ENST00000485102 CABP5Q9NP86 173 aa15.85■□□□□ 0.13
HDAC6-227ENST00000485102 DLL1O00548 723 aa15.84■□□□□ 0.13
HDAC6-227ENST00000485102 SHMT1P34896 483 aa15.84■□□□□ 0.13
HDAC6-227ENST00000485102 GRB14Q14449 540 aa15.84■□□□□ 0.13
HDAC6-227ENST00000485102 LRRC26Q2I0M4 334 aa15.84■□□□□ 0.13
HDAC6-227ENST00000485102 ERC1Q8IUD2 1116 aa15.84■□□□□ 0.13
HDAC6-227ENST00000485102 MIER1Q8N108 512 aa15.84■□□□□ 0.13
HDAC6-227ENST00000485102 DEFB123Q8N688 67 aa15.84■□□□□ 0.13
HDAC6-227ENST00000485102 FEZ1Q99689 392 aa15.84■□□□□ 0.13
HDAC6-227ENST00000485102 UBE2OQ9C0C9 1292 aaKnown RBP15.84■□□□□ 0.13
HDAC6-227ENST00000485102 STXBP5LQ9Y2K9 1186 aa15.84■□□□□ 0.13
HDAC6-227ENST00000485102 SPDYE16A6NNV3 312 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-227ENST00000485102 GUCY1A2P33402 732 aa15.83■□□□□ 0.12
HDAC6-227ENST00000485102 PLCD1P51178 756 aa15.83■□□□□ 0.12
HDAC6-227ENST00000485102 RAB3GAP1Q15042 981 aa15.83■□□□□ 0.12
HDAC6-227ENST00000485102 FTSJ3Q8IY81 847 aaKnown RBP15.83■□□□□ 0.12
HDAC6-227ENST00000485102 ACER1Q8TDN7 264 aa15.83■□□□□ 0.12
HDAC6-227ENST00000485102 LPAR1Q92633 364 aa15.83■□□□□ 0.12
HDAC6-227ENST00000485102 ANTXR1Q9H6X2 564 aa15.83■□□□□ 0.12
HDAC6-227ENST00000485102 C1orf115Q9H7X2 142 aa15.83■□□□□ 0.12
HDAC6-227ENST00000485102 MTMR10Q9NXD2 777 aa15.83■□□□□ 0.12
HDAC6-227ENST00000485102 HOXC10Q9NYD6 342 aa15.83■□□□□ 0.12
HDAC6-227ENST00000485102 FLRT1Q9NZU1 646 aa15.83■□□□□ 0.12
HDAC6-227ENST00000485102 BTBD7Q9P203 1132 aa15.83■□□□□ 0.12
HDAC6-227ENST00000485102 STRNO43815 780 aa15.82■□□□□ 0.12
HDAC6-227ENST00000485102 RLBP1P12271 317 aa15.82■□□□□ 0.12
HDAC6-227ENST00000485102 TTF1Q15361 905 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-227ENST00000485102 CEP85Q6P2H3 762 aa15.82■□□□□ 0.12
HDAC6-227ENST00000485102 CWC22Q9HCG8 908 aaKnown RBP15.82■□□□□ 0.12
HDAC6-227ENST00000485102 DDX20Q9UHI6 824 aaKnown RBP15.82■□□□□ 0.12
HDAC6-227ENST00000485102 IVNS1ABPQ9Y6Y0 642 aa15.82■□□□□ 0.12
HDAC6-227ENST00000485102 DNAH12Q6ZR08 3092 aa15.82■□□□□ 0.12
HDAC6-227ENST00000485102 ATP2B2Q01814 1243 aa15.81■□□□□ 0.12
HDAC6-227ENST00000485102 COG2Q14746 738 aa15.81■□□□□ 0.12
HDAC6-227ENST00000485102 ZYXQ15942 572 aaKnown RBP15.81■□□□□ 0.12
HDAC6-227ENST00000485102 HSP90AB4PQ58FF6 505 aa15.81■□□□□ 0.12
HDAC6-227ENST00000485102 FRMPD3Q5JV73 1810 aa15.81■□□□□ 0.12
HDAC6-227ENST00000485102 FAM109BQ6ICB4 259 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-227ENST00000485102 ITPRIPQ8IWB1 547 aa15.81■□□□□ 0.12
HDAC6-227ENST00000485102 SHCBP1Q8NEM2 672 aa15.81■□□□□ 0.12
HDAC6-227ENST00000485102 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.81■□□□□ 0.12
HDAC6-227ENST00000485102 RPAP3Q9H6T3 665 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-227ENST00000485102 DNM1LO00429 736 aa15.8■□□□□ 0.12
HDAC6-227ENST00000485102 OLFML2BQ68BL8 750 aa15.8■□□□□ 0.12
HDAC6-227ENST00000485102 MB21D1Q8N884 522 aa15.8■□□□□ 0.12
HDAC6-227ENST00000485102 NPLOC4Q8TAT6 608 aa15.8■□□□□ 0.12
HDAC6-227ENST00000485102 NDUFB9Q9Y6M9 179 aa15.8■□□□□ 0.12
HDAC6-227ENST00000485102 RLFQ13129 1914 aa15.79■□□□□ 0.12
HDAC6-227ENST00000485102 MAGEB6P1A0A0J9YX57 407 aa15.79■□□□□ 0.12
HDAC6-227ENST00000485102 A0A1W2PRG0 241 aa15.79■□□□□ 0.12
HDAC6-227ENST00000485102 POTEB2H3BUK9 544 aa15.79■□□□□ 0.12
HDAC6-227ENST00000485102 POLR3DP05423 398 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-227ENST00000485102 CYBAP13498 195 aa15.79■□□□□ 0.12
HDAC6-227ENST00000485102 SEPT2Q15019 361 aa15.79■□□□□ 0.12
HDAC6-227ENST00000485102 AACSQ86V21 672 aa15.79■□□□□ 0.12
HDAC6-227ENST00000485102 CRNKL1Q9BZJ0 848 aaKnown RBP15.79■□□□□ 0.12
HDAC6-227ENST00000485102 SENP6Q9GZR1 1112 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-227ENST00000485102 ZNF236Q9UL36 1845 aa15.79■□□□□ 0.12
HDAC6-227ENST00000485102 PDE6AP16499 860 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 CYP2C19P33261 490 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 SLC9C2Q5TAH2 1124 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 WDR78Q5VTH9 848 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 Q7L0L9 218 aa15.78■□□□□ 0.12
HDAC6-227ENST00000485102 ABRAQ8N0Z2 381 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms