RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 SAP30BPQ9UHR5 308 aaKnown RBP18.75■□□□□ 0.59
HLA-DQB1-208ENST00000484729 MAST2Q6P0Q8 1798 aa18.74■□□□□ 0.59
HLA-DQB1-208ENST00000484729 CNMDO75829 334 aa18.74■□□□□ 0.59
HLA-DQB1-208ENST00000484729 ATP8B2P98198 1209 aa18.74■□□□□ 0.59
HLA-DQB1-208ENST00000484729 MFSD14CQ5VZR4 134 aa18.74■□□□□ 0.59
HLA-DQB1-208ENST00000484729 NAA16Q6N069 864 aaPredicted RBP18.74■□□□□ 0.59
HLA-DQB1-208ENST00000484729 FOXP4Q8IVH2 680 aaPredicted RBP18.74■□□□□ 0.59
HLA-DQB1-208ENST00000484729 DDX20Q9UHI6 824 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB1-208ENST00000484729 FLT1P17948 1338 aa18.74■□□□□ 0.59
HLA-DQB1-208ENST00000484729 RTP1P59025 263 aa18.73■□□□□ 0.59
HLA-DQB1-208ENST00000484729 SHHQ15465 462 aa18.73■□□□□ 0.59
HLA-DQB1-208ENST00000484729 USP17L2Q6R6M4 530 aa18.73■□□□□ 0.59
HLA-DQB1-208ENST00000484729 ADGRA1Q86SQ6 560 aa18.73■□□□□ 0.59
HLA-DQB1-208ENST00000484729 METTL16Q86W50 562 aaKnown RBP18.73■□□□□ 0.59
HLA-DQB1-208ENST00000484729 MAFAQ8NHW3 353 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB1-208ENST00000484729 GTF3C2Q8WUA4 911 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB1-208ENST00000484729 PRUNE2Q8WUY3 3088 aa18.73■□□□□ 0.59
HLA-DQB1-208ENST00000484729 SPTBN5Q9NRC6 3674 aaKnown RBP18.72■□□□□ 0.59
HLA-DQB1-208ENST00000484729 BAG3O95817 575 aa18.72■□□□□ 0.59
HLA-DQB1-208ENST00000484729 RLBP1P12271 317 aa18.72■□□□□ 0.59
HLA-DQB1-208ENST00000484729 CYP2C19P33261 490 aa18.72■□□□□ 0.59
HLA-DQB1-208ENST00000484729 C9orf50Q5SZB4 431 aa18.72■□□□□ 0.59
HLA-DQB1-208ENST00000484729 TRPV1Q8NER1 839 aa18.72■□□□□ 0.59
HLA-DQB1-208ENST00000484729 NPLOC4Q8TAT6 608 aa18.72■□□□□ 0.59
HLA-DQB1-208ENST00000484729 SEMA6BQ9H3T3 888 aa18.72■□□□□ 0.59
HLA-DQB1-208ENST00000484729 PRKAG2Q9UGJ0 569 aa18.72■□□□□ 0.59
HLA-DQB1-208ENST00000484729 ATP11BQ9Y2G3 1177 aa18.72■□□□□ 0.59
HLA-DQB1-208ENST00000484729 RABGAP1Q9Y3P9 1069 aa18.72■□□□□ 0.59
HLA-DQB1-208ENST00000484729 GH2P01242 217 aa18.71■□□□□ 0.59
HLA-DQB1-208ENST00000484729 PLCG2P16885 1265 aa18.71■□□□□ 0.59
HLA-DQB1-208ENST00000484729 PTPREP23469 700 aa18.71■□□□□ 0.59
HLA-DQB1-208ENST00000484729 ATP2B2Q01814 1243 aa18.71■□□□□ 0.59
HLA-DQB1-208ENST00000484729 GJC2Q5T442 439 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB1-208ENST00000484729 LPAR1Q92633 364 aa18.71■□□□□ 0.59
HLA-DQB1-208ENST00000484729 LTBP2Q14767 1821 aa18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 SLC15A5A6NIM6 579 aa18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 DNM1LO00429 736 aa18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 GLRX3O76003 335 aaKnown RBP18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 CYP2E1P05181 493 aaPredicted RBP18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 ZAP70P43403 619 aa18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 PPP4CP60510 307 aa18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 CCNA1P78396 465 aa18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 MYLIPQ8WY64 445 aa18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 FEZ1Q99689 392 aa18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 PRDM5Q9NQX1 630 aaPredicted RBP18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 GINM1Q9NU53 330 aa18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 TLR7Q9NYK1 1049 aaKnown RBP18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 BTBD7Q9P203 1132 aa18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 DBNLQ9UJU6 430 aaKnown RBP18.7■□□□□ 0.58
HLA-DQB1-208ENST00000484729 CDK5RAP2Q96SN8 1893 aa18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 USP17L15C9J2P7 530 aa18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 USP17L13C9JLJ4 530 aa18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 USP17L11C9JVI0 530 aa18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 USP17L18D6R9N7 530 aa18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 USP17L22D6RA61 530 aa18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 USP17L17D6RBQ6 530 aa18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 USP17L19D6RCP7 530 aa18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 USP17L20D6RJB6 530 aa18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 DYNLL1P63167 89 aaKnown RBP18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 USP17L24Q0WX57 530 aa18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 ANO1Q5XXA6 986 aa18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 CCDC8Q9H0W5 538 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 TTYH1Q9H313 450 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 PIH1D3Q9NQM4 214 aaKnown RBP18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 NOP58Q9Y2X3 529 aaKnown RBP18.69■□□□□ 0.58
HLA-DQB1-208ENST00000484729 MSCO60682 206 aa18.68■□□□□ 0.58
HLA-DQB1-208ENST00000484729 SLC39A5Q6ZMH5 540 aa18.68■□□□□ 0.58
HLA-DQB1-208ENST00000484729 CATSPERGQ6ZRH7 1159 aa18.68■□□□□ 0.58
HLA-DQB1-208ENST00000484729 BADQ92934 168 aa18.68■□□□□ 0.58
HLA-DQB1-208ENST00000484729 ZNF512BQ96KM6 892 aaPredicted RBP18.68■□□□□ 0.58
HLA-DQB1-208ENST00000484729 C12orf42Q96LP6 360 aa18.68■□□□□ 0.58
HLA-DQB1-208ENST00000484729 PRDM6Q9NQX0 595 aa18.68■□□□□ 0.58
HLA-DQB1-208ENST00000484729 IVNS1ABPQ9Y6Y0 642 aa18.68■□□□□ 0.58
HLA-DQB1-208ENST00000484729 TTC28Q96AY4 2481 aa18.67■□□□□ 0.58
HLA-DQB1-208ENST00000484729 MYCNP04198 464 aaPredicted RBP18.67■□□□□ 0.58
HLA-DQB1-208ENST00000484729 HLA-DOAP06340 250 aa18.67■□□□□ 0.58
HLA-DQB1-208ENST00000484729 HOXC6P09630 235 aa18.67■□□□□ 0.58
HLA-DQB1-208ENST00000484729 CYBAP13498 195 aa18.67■□□□□ 0.58
HLA-DQB1-208ENST00000484729 GRB14Q14449 540 aa18.67■□□□□ 0.58
HLA-DQB1-208ENST00000484729 CEP85Q6P2H3 762 aa18.67■□□□□ 0.58
HLA-DQB1-208ENST00000484729 ACER1Q8TDN7 264 aa18.67■□□□□ 0.58
HLA-DQB1-208ENST00000484729 FOCADQ5VW36 1801 aa18.66■□□□□ 0.58
HLA-DQB1-208ENST00000484729 IDH1O75874 414 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB1-208ENST00000484729 VCAM1P19320 739 aa18.66■□□□□ 0.58
HLA-DQB1-208ENST00000484729 RAB3GAP1Q15042 981 aa18.66■□□□□ 0.58
HLA-DQB1-208ENST00000484729 TRIM60Q495X7 471 aa18.66■□□□□ 0.58
HLA-DQB1-208ENST00000484729 SH3RF1Q7Z6J0 888 aa18.66■□□□□ 0.58
HLA-DQB1-208ENST00000484729 PANK1Q8TE04 598 aa18.66■□□□□ 0.58
HLA-DQB1-208ENST00000484729 EAF2Q96CJ1 260 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-208ENST00000484729 ZBED9Q6R2W3 1325 aa18.66■□□□□ 0.58
HLA-DQB1-208ENST00000484729 IGHA2P01877 340 aa18.65■□□□□ 0.58
HLA-DQB1-208ENST00000484729 CYP7A1P22680 504 aa18.65■□□□□ 0.58
HLA-DQB1-208ENST00000484729 TATDN1Q6P1N9 297 aa18.65■□□□□ 0.58
HLA-DQB1-208ENST00000484729 ARRDC4Q8NCT1 418 aa18.65■□□□□ 0.58
HLA-DQB1-208ENST00000484729 EXOC6BQ9Y2D4 811 aa18.65■□□□□ 0.58
HLA-DQB1-208ENST00000484729 RLFQ13129 1914 aa18.64■□□□□ 0.58
HLA-DQB1-208ENST00000484729 TRIM43BA6NCK2 446 aa18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 SPDYE16A6NNV3 312 aaPredicted RBP18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 KBTBD13C9JR72 458 aa18.64■□□□□ 0.57
HLA-DQB1-208ENST00000484729 IGSF3O75054 1194 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms