RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-206ENST00000484388 SCARF2Q96GP6 870 aaPredicted RBP3.27□□□□□ -1.89
ABCA4-206ENST00000484388 DNAJC7Q99615 494 aa3.27□□□□□ -1.89
ABCA4-206ENST00000484388 KIF2CQ99661 725 aa3.27□□□□□ -1.89
ABCA4-206ENST00000484388 YIPF2Q9BWQ6 316 aa3.27□□□□□ -1.89
ABCA4-206ENST00000484388 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.27□□□□□ -1.89
ABCA4-206ENST00000484388 SSU72Q9NP77 194 aaKnown RBP3.27□□□□□ -1.89
ABCA4-206ENST00000484388 SUCOQ9UBS9 1254 aaKnown RBP3.27□□□□□ -1.89
ABCA4-206ENST00000484388 SBNO2Q9Y2G9 1366 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 CCDC85CA6NKD9 419 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 SART1O43290 800 aaKnown RBP3.26□□□□□ -1.89
ABCA4-206ENST00000484388 GAS2O43903 313 aaKnown RBP3.26□□□□□ -1.89
ABCA4-206ENST00000484388 ALX3O95076 343 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 APBA3O96018 575 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 NAT2P11245 290 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 GLB1P16278 677 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 NCLP19338 710 aaKnown RBP3.26□□□□□ -1.89
ABCA4-206ENST00000484388 COL8A1P27658 744 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 NOS3P29474 1203 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 POLR2BP30876 1174 aaKnown RBP3.26□□□□□ -1.89
ABCA4-206ENST00000484388 GBP1P32455 592 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 PREPP48147 710 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 USP11P51784 963 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 CHMP4BP1P59074 171 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 INSM1Q01101 510 aaPredicted RBP3.26□□□□□ -1.89
ABCA4-206ENST00000484388 ADGRE1Q14246 886 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 LONRF2Q1L5Z9 754 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 GNPTABQ3T906 1256 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 ANKRD39Q53RE8 183 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 C2orf27AQ580R0 203 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 PLEKHG4Q58EX7 1191 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 ZC3H12BQ5HYM0 836 aaKnown RBP3.26□□□□□ -1.89
ABCA4-206ENST00000484388 PRAMEF13Q5VWM6 474 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 KIAA1211LQ6NV74 962 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 ARMCX6Q7L4S7 300 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 DZIP1LQ8IYY4 767 aaKnown RBP3.26□□□□□ -1.89
ABCA4-206ENST00000484388 THAP3Q8WTV1 239 aaPredicted RBP3.26□□□□□ -1.89
ABCA4-206ENST00000484388 PPP1R13LQ8WUF5 828 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 MYRFLQ96LU7 910 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 SLC6A18Q96N87 628 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 PSMG3-AS1Q96PY0 264 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 UBL7Q96S82 380 aaPredicted RBP3.26□□□□□ -1.89
ABCA4-206ENST00000484388 TMX1Q9H3N1 280 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 TMEM260Q9NX78 707 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 ZMYM5Q9UJ78 669 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 USP21Q9UK80 565 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 CEP131Q9UPN4 1083 aa3.26□□□□□ -1.89
ABCA4-206ENST00000484388 COL17A1Q9UMD9 1497 aaPredicted RBP3.26□□□□□ -1.89
ABCA4-206ENST00000484388 KDM2BQ8NHM5 1336 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 KRBA1A5PL33 1030 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 ANKRD34BA5PLL1 514 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 IQCA1LA6NCM1 817 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 SUSD5O60279 629 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 CLEC3AO75596 197 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 HMGB1P09429 215 aaKnown RBP3.25□□□□□ -1.89
ABCA4-206ENST00000484388 IREB2P48200 963 aaKnown RBP3.25□□□□□ -1.89
ABCA4-206ENST00000484388 RNF4P78317 190 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 SQSTM1Q13501 440 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 MAP7Q14244 749 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 MBTPS1Q14703 1052 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 SLC10A6Q3KNW5 377 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 CDPF1Q6NVV7 123 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 SEZ6L2Q6UXD5 910 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 SPATC1Q76KD6 591 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 TXNRD3Q86VQ6 643 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 PPFIBP1Q86W92 1011 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 HOMER1Q86YM7 354 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 LRRC47Q8N1G4 583 aaKnown RBP3.25□□□□□ -1.89
ABCA4-206ENST00000484388 SYNPOQ8N3V7 929 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 DNAJB8Q8NHS0 232 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 BAHD1Q8TBE0 780 aaPredicted RBP3.25□□□□□ -1.89
ABCA4-206ENST00000484388 APPBP2Q92624 585 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 VWCEQ96DN2 955 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 SGSM3Q96HU1 749 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 FBXL18Q96ME1 805 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 DPH2Q9BQC3 489 aaPredicted RBP3.25□□□□□ -1.89
ABCA4-206ENST00000484388 SEMA6CQ9H3T2 930 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 SUSD2Q9UGT4 822 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 PCDHB10Q9UN67 800 aa3.25□□□□□ -1.89
ABCA4-206ENST00000484388 CCDC163A0A0D9SF12 145 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 ANKRD62A6NC57 917 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 FAM86C2PA6NEL3 165 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 DIAPH1O60610 1272 aaKnown RBP3.24□□□□□ -1.89
ABCA4-206ENST00000484388 CDC45O75419 566 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 NFICP08651 508 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 BMP3P12645 472 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 RAB6AP20340 208 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 ETV3P41162 512 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 SSRP1Q08945 709 aaKnown RBP3.24□□□□□ -1.89
ABCA4-206ENST00000484388 NBPF12Q5TAG4 269 aaPredicted RBP3.24□□□□□ -1.89
ABCA4-206ENST00000484388 LETMD1Q6P1Q0 360 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 ZNF662Q6ZS27 426 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 KIAA0907Q7Z7F0 614 aaPredicted RBP3.24□□□□□ -1.89
ABCA4-206ENST00000484388 FAM20CQ8IXL6 584 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 ARMC10Q8N2F6 343 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 ZBTB38Q8NAP3 1195 aaPredicted RBP3.24□□□□□ -1.89
ABCA4-206ENST00000484388 FBLIM1Q8WUP2 373 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 COX4I2Q96KJ9 171 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 SLC26A8Q96RN1 970 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 APBA2Q99767 749 aa3.24□□□□□ -1.89
ABCA4-206ENST00000484388 HAUS7Q99871 368 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms