RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 USP17L4A6NCW7 530 aa11.02□□□□□ -0.65
COL8A1-207ENST00000483969 H7C1D1 291 aa11.02□□□□□ -0.65
COL8A1-207ENST00000483969 VIL1P09327 827 aaKnown RBP11.02□□□□□ -0.65
COL8A1-207ENST00000483969 IFIT1P09914 478 aaKnown RBP11.02□□□□□ -0.65
COL8A1-207ENST00000483969 RPS12P25398 132 aaKnown RBP11.02□□□□□ -0.65
COL8A1-207ENST00000483969 HIBADHP31937 336 aaKnown RBP11.02□□□□□ -0.65
COL8A1-207ENST00000483969 CAVIN4Q5BKX8 364 aa11.02□□□□□ -0.65
COL8A1-207ENST00000483969 USP17L1Q7RTZ2 530 aa11.02□□□□□ -0.65
COL8A1-207ENST00000483969 ATG9AQ7Z3C6 839 aa11.02□□□□□ -0.65
COL8A1-207ENST00000483969 RPAP2Q8IXW5 612 aaPredicted RBP11.02□□□□□ -0.65
COL8A1-207ENST00000483969 DPF2Q92785 391 aa11.02□□□□□ -0.65
COL8A1-207ENST00000483969 SIL1Q9H173 461 aa11.02□□□□□ -0.65
COL8A1-207ENST00000483969 TAF1DQ9H5J8 278 aaPredicted RBP11.02□□□□□ -0.65
COL8A1-207ENST00000483969 CD209Q9NNX6 404 aa11.02□□□□□ -0.65
COL8A1-207ENST00000483969 SNAP23O00161 211 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 PSMD14O00487 310 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 EPHX2P34913 555 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 GMPSP49915 693 aaPredicted RBP11.01□□□□□ -0.65
COL8A1-207ENST00000483969 C1QTNF8P60827 252 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 PUM3Q15397 648 aaKnown RBP11.01□□□□□ -0.65
COL8A1-207ENST00000483969 STRIP1Q5VSL9 837 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 TTLL5Q6EMB2 1281 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 TMEM214Q6NUQ4 689 aaKnown RBP11.01□□□□□ -0.65
COL8A1-207ENST00000483969 TXNRD3Q86VQ6 643 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 VPS37DQ86XT2 251 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 SSH3Q8TE77 659 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 LPIN2Q92539 896 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 OXCT2Q9BYC2 517 aaPredicted RBP11.01□□□□□ -0.65
COL8A1-207ENST00000483969 KCNQ5Q9NR82 932 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 ZBTB40Q9NUA8 1239 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 GPRC5DQ9NZD1 345 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 PA2G4Q9UQ80 394 aaKnown RBP11.01□□□□□ -0.65
COL8A1-207ENST00000483969 AKAP2Q9Y2D5 859 aa11.01□□□□□ -0.65
COL8A1-207ENST00000483969 PNMA6EA0A0J9YXQ4 647 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 OIP5O43482 229 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 SLC5A1P13866 664 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 IL1R1P14778 569 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 EPS15P42566 896 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 MMP14P50281 582 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 SCNN1DP51172 638 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 RRP1P56182 461 aaKnown RBP11□□□□□ -0.65
COL8A1-207ENST00000483969 FSTL1Q12841 308 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 USP4Q13107 963 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 C20orf194Q5TEA3 1177 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 USP50Q70EL3 339 aaPredicted RBP11□□□□□ -0.65
COL8A1-207ENST00000483969 PGBD3Q8N328 593 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 VGLL2Q8N8G2 317 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 SMC1BQ8NDV3 1235 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 AGBL3Q8NEM8 1001 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 FAM84BQ96KN1 310 aaPredicted RBP11□□□□□ -0.65
COL8A1-207ENST00000483969 C1orf115Q9H7X2 142 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 ADARB2Q9NS39 739 aaKnown RBP11□□□□□ -0.65
COL8A1-207ENST00000483969 CNOT7Q9UIV1 285 aaKnown RBP11□□□□□ -0.65
COL8A1-207ENST00000483969 LAMB2P55268 1798 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 FER1L6Q2WGJ9 1857 aa11□□□□□ -0.65
COL8A1-207ENST00000483969 COL4A1P02462 1669 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 HMMRO75330 724 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 FRAT2O75474 233 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-207ENST00000483969 SURF6O75683 361 aaKnown RBP10.99□□□□□ -0.65
COL8A1-207ENST00000483969 SASH1O94885 1247 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 THBS1P07996 1170 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 FGFR2P21802 821 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 KLRK1P26718 216 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 GTF2IP78347 998 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 OS9Q13438 667 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-207ENST00000483969 SLFNL1Q499Z3 407 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-207ENST00000483969 CEP85Q6P2H3 762 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 FBXO33Q7Z6M2 555 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 LDHDQ86WU2 507 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 MYO3BQ8WXR4 1341 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 CNTNAP5Q8WYK1 1306 aa10.99□□□□□ -0.65
COL8A1-207ENST00000483969 PHKA2P46019 1235 aa10.98□□□□□ -0.65
COL8A1-207ENST00000483969 GYG1P46976 350 aa10.98□□□□□ -0.65
COL8A1-207ENST00000483969 ATP2B3Q16720 1220 aa10.98□□□□□ -0.65
COL8A1-207ENST00000483969 C4orf17Q53FE4 359 aa10.98□□□□□ -0.65
COL8A1-207ENST00000483969 HSP90AB4PQ58FF6 505 aa10.98□□□□□ -0.65
COL8A1-207ENST00000483969 DACT2Q5SW24 774 aa10.98□□□□□ -0.65
COL8A1-207ENST00000483969 RNF135Q8IUD6 432 aa10.98□□□□□ -0.65
COL8A1-207ENST00000483969 OGFOD1Q8N543 542 aa10.98□□□□□ -0.65
COL8A1-207ENST00000483969 TDRD7Q8NHU6 1098 aaKnown RBP10.98□□□□□ -0.65
COL8A1-207ENST00000483969 RHBDD1Q8TEB9 315 aa10.98□□□□□ -0.65
COL8A1-207ENST00000483969 GNL3LQ9NVN8 582 aaKnown RBP10.98□□□□□ -0.65
COL8A1-207ENST00000483969 GDF2Q9UK05 429 aaPredicted RBP10.98□□□□□ -0.65
COL8A1-207ENST00000483969 IRS2Q9Y4H2 1338 aa10.98□□□□□ -0.65
COL8A1-207ENST00000483969 CHD4Q14839 1912 aa10.97□□□□□ -0.65
COL8A1-207ENST00000483969 GOLGB1Q14789 3259 aaKnown RBP10.97□□□□□ -0.65
COL8A1-207ENST00000483969 FKBP1AP62942 108 aaKnown RBP10.97□□□□□ -0.65
COL8A1-207ENST00000483969 TFCP2Q12800 502 aa10.97□□□□□ -0.65
COL8A1-207ENST00000483969 EFHC2Q5JST6 749 aa10.97□□□□□ -0.65
COL8A1-207ENST00000483969 HDAC9Q9UKV0 1011 aa10.97□□□□□ -0.65
COL8A1-207ENST00000483969 NOP58Q9Y2X3 529 aaKnown RBP10.97□□□□□ -0.65
COL8A1-207ENST00000483969 DUOX1Q9NRD9 1551 aa10.97□□□□□ -0.65
COL8A1-207ENST00000483969 COL4A5P29400 1685 aa10.97□□□□□ -0.65
COL8A1-207ENST00000483969 LRRC37AA6NMS7 1700 aa10.96□□□□□ -0.65
COL8A1-207ENST00000483969 FAM205AQ6ZU69 1335 aa10.96□□□□□ -0.65
COL8A1-207ENST00000483969 TIMM10P62072 90 aa10.96□□□□□ -0.65
COL8A1-207ENST00000483969 TLR1Q15399 786 aa10.96□□□□□ -0.65
COL8A1-207ENST00000483969 PLA2G4EQ3MJ16 856 aa10.96□□□□□ -0.65
COL8A1-207ENST00000483969 GORABQ5T7V8 394 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms