RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SHISA4Q96DD7 197 aa15.29■□□□□ 0.04
CPNE1-225ENST00000483495 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.29■□□□□ 0.04
CPNE1-225ENST00000483495 V9GY48 417 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-225ENST00000483495 SLX4Q8IY92 1834 aa15.29■□□□□ 0.04
CPNE1-225ENST00000483495 CHRNA5P30532 468 aa15.29■□□□□ 0.04
CPNE1-225ENST00000483495 CC2D2BQ6DHV5 1058 aa15.29■□□□□ 0.04
CPNE1-225ENST00000483495 JMYQ8N9B5 988 aa15.29■□□□□ 0.04
CPNE1-225ENST00000483495 PNMA1Q8ND90 353 aa15.29■□□□□ 0.04
CPNE1-225ENST00000483495 NEDD1Q8NHV4 660 aa15.29■□□□□ 0.04
CPNE1-225ENST00000483495 FBXW7Q969H0 707 aa15.29■□□□□ 0.04
CPNE1-225ENST00000483495 PHF20Q9BVI0 1012 aa15.29■□□□□ 0.04
CPNE1-225ENST00000483495 USP17L3A6NCW0 530 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 USP17L4A6NCW7 530 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 G3V3G9 751 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 WDHD1O75717 1129 aaPredicted RBP15.28■□□□□ 0.04
CPNE1-225ENST00000483495 CMA1P23946 247 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 NOVP48745 357 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 GRM4Q14833 912 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 RILPL1Q5EBL4 403 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 DCAF8Q5TAQ9 597 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 STRIP1Q5VSL9 837 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 USP17L1Q7RTZ2 530 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 CKAP2LQ8IYA6 745 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 MRVI1Q9Y6F6 885 aa15.28■□□□□ 0.04
CPNE1-225ENST00000483495 KINO60870 393 aaKnown RBP15.27■□□□□ 0.04
CPNE1-225ENST00000483495 TOB1P50616 345 aaPredicted RBP15.27■□□□□ 0.04
CPNE1-225ENST00000483495 GABPAQ06546 454 aa15.27■□□□□ 0.04
CPNE1-225ENST00000483495 MXD3Q9BW11 206 aa15.27■□□□□ 0.04
CPNE1-225ENST00000483495 MORC2Q9Y6X9 1032 aaPredicted RBP15.27■□□□□ 0.04
CPNE1-225ENST00000483495 C10orf71Q711Q0 1435 aa15.27■□□□□ 0.04
CPNE1-225ENST00000483495 FAM237AA0A1B0GTK4 181 aa15.27■□□□□ 0.03
CPNE1-225ENST00000483495 F8W031 263 aaPredicted RBP15.27■□□□□ 0.03
CPNE1-225ENST00000483495 BAG6P46379 1132 aa15.27■□□□□ 0.03
CPNE1-225ENST00000483495 GNAQP50148 359 aa15.27■□□□□ 0.03
CPNE1-225ENST00000483495 APOBEC3HQ6NTF7 200 aaKnown RBP15.27■□□□□ 0.03
CPNE1-225ENST00000483495 TEKT1Q969V4 418 aa15.27■□□□□ 0.03
CPNE1-225ENST00000483495 DBNDD1Q9H9R9 158 aa15.27■□□□□ 0.03
CPNE1-225ENST00000483495 VPS54Q9P1Q0 977 aa15.27■□□□□ 0.03
CPNE1-225ENST00000483495 PLIN4Q96Q06 1357 aa15.27■□□□□ 0.03
CPNE1-225ENST00000483495 A0A1B0GVL5 298 aa15.26■□□□□ 0.03
CPNE1-225ENST00000483495 NDUFA8P51970 172 aa15.26■□□□□ 0.03
CPNE1-225ENST00000483495 HDLBPQ00341 1268 aaKnown RBP15.26■□□□□ 0.03
CPNE1-225ENST00000483495 NR5A1Q13285 461 aa15.26■□□□□ 0.03
CPNE1-225ENST00000483495 NPY5RQ15761 445 aa15.26■□□□□ 0.03
CPNE1-225ENST00000483495 PFKFB3Q16875 520 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-225ENST00000483495 DACT2Q5SW24 774 aa15.26■□□□□ 0.03
CPNE1-225ENST00000483495 FAM43AQ8N2R8 423 aa15.26■□□□□ 0.03
CPNE1-225ENST00000483495 FAM200AQ8TCP9 573 aa15.26■□□□□ 0.03
CPNE1-225ENST00000483495 OXER1Q8TDS5 423 aa15.26■□□□□ 0.03
CPNE1-225ENST00000483495 ZDHHC15Q96MV8 337 aa15.26■□□□□ 0.03
CPNE1-225ENST00000483495 TMEM47Q9BQJ4 181 aa15.26■□□□□ 0.03
CPNE1-225ENST00000483495 DDX4Q9NQI0 724 aaKnown RBP15.26■□□□□ 0.03
CPNE1-225ENST00000483495 USP40Q9NVE5 1235 aa15.26■□□□□ 0.03
CPNE1-225ENST00000483495 MYH1P12882 1939 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 ECE2O60344 883 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 CAVIN2O95810 425 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 SCG2P13521 617 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 MARCKSP29966 332 aaPredicted RBP15.25■□□□□ 0.03
CPNE1-225ENST00000483495 KRT2P35908 639 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 KIAA2012Q0VF49 1180 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 HS1BP3Q53T59 392 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 CDC42EP5Q6NZY7 148 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 SASS6Q6UVJ0 657 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 FBXO41Q8TF61 875 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 TRIM44Q96DX7 344 aaPredicted RBP15.25■□□□□ 0.03
CPNE1-225ENST00000483495 KCNQ5Q9NR82 932 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 MAD2L2Q9UI95 211 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 TAOK2Q9UL54 1235 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 HPSEQ9Y251 543 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 MYO3BQ8WXR4 1341 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 MYH6P13533 1939 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 CUTAO60888 179 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 CRKP46108 304 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 SCNN1DP51172 638 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 SF3B2Q13435 895 aaKnown RBP15.25■□□□□ 0.03
CPNE1-225ENST00000483495 GRIPAP1Q4V328 841 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 SUPT20HQ8NEM7 779 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 TNFRSF25Q93038 417 aa15.25■□□□□ 0.03
CPNE1-225ENST00000483495 ZNF646O15015 1829 aaPredicted RBP15.24■□□□□ 0.03
CPNE1-225ENST00000483495 hCG_1642624A0A1W2PR95 340 aa15.24■□□□□ 0.03
CPNE1-225ENST00000483495 PALM3A6NDB9 673 aaPredicted RBP15.24■□□□□ 0.03
CPNE1-225ENST00000483495 SLC16A10Q8TF71 515 aa15.24■□□□□ 0.03
CPNE1-225ENST00000483495 LZTS2Q9BRK4 669 aa15.24■□□□□ 0.03
CPNE1-225ENST00000483495 PDGFDQ9GZP0 370 aaPredicted RBP15.24■□□□□ 0.03
CPNE1-225ENST00000483495 OSBPL5Q9H0X9 879 aaPredicted RBP15.24■□□□□ 0.03
CPNE1-225ENST00000483495 SH3GLB2Q9NR46 395 aa15.24■□□□□ 0.03
CPNE1-225ENST00000483495 PFKFB1P16118 471 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 PICALMQ13492 652 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 ANO6Q4KMQ2 910 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 RESP18Q5W5W9 173 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 SHC4Q6S5L8 630 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 STAG2Q8N3U4 1231 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 TIGD1Q96MW7 591 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 BRMS1Q9HCU9 246 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 SWAP70Q9UH65 585 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 STX8Q9UNK0 236 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 ZNF202O95125 648 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 TOP1P11387 765 aaKnown RBP15.23■□□□□ 0.03
CPNE1-225ENST00000483495 PTPREP23469 700 aa15.23■□□□□ 0.03
CPNE1-225ENST00000483495 DEFB132Q7Z7B7 95 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms