RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 DGKZQ13574 1117 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 COL9A3Q14050 684 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-224ENST00000483359 ZYXQ15942 572 aaKnown RBP21.06■□□□□ 0.96
CPNE1-224ENST00000483359 NEDD1Q8NHV4 660 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 CEP95Q96GE4 821 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 AS3MTQ9HBK9 375 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 GINM1Q9NU53 330 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 PLIN4Q96Q06 1357 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 ZBTB48P10074 688 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-224ENST00000483359 MCCP23508 829 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 MTMR2Q13614 643 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 ADCK5Q3MIX3 580 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 CHST3Q7LGC8 479 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 ZNF280CQ8ND82 737 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 NCOA7Q8NI08 942 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 ACER1Q8TDN7 264 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 AFG3L2Q9Y4W6 797 aa21.06■□□□□ 0.96
CPNE1-224ENST00000483359 FEZ1Q99689 392 aa21.05■□□□□ 0.96
CPNE1-224ENST00000483359 SNX14Q9Y5W7 946 aa21.05■□□□□ 0.96
CPNE1-224ENST00000483359 EPB41L2O43491 1005 aaKnown RBP21.05■□□□□ 0.96
CPNE1-224ENST00000483359 EEF2P13639 858 aaKnown RBP21.05■□□□□ 0.96
CPNE1-224ENST00000483359 KANSL2Q9H9L4 492 aa21.05■□□□□ 0.96
CPNE1-224ENST00000483359 IL17RBQ9NRM6 502 aa21.05■□□□□ 0.96
CPNE1-224ENST00000483359 ZSWIM5Q9P217 1185 aa21.05■□□□□ 0.96
CPNE1-224ENST00000483359 STX8Q9UNK0 236 aa21.05■□□□□ 0.96
CPNE1-224ENST00000483359 CYB5R4Q7L1T6 521 aa21.04■□□□□ 0.96
CPNE1-224ENST00000483359 IGKV6D-41A0A0C4DH26 115 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 A0A1W2PRG0 241 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 EIF5BO60841 1220 aaKnown RBP21.03■□□□□ 0.96
CPNE1-224ENST00000483359 NOGQ13253 232 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 PTPRFP10586 1907 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 RAD21O60216 631 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 HMGCS2P54868 508 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 SNAPC2Q13487 334 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 SIAH1Q8IUQ4 282 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 MB21D2Q8IYB1 491 aaPredicted RBP21.03■□□□□ 0.96
CPNE1-224ENST00000483359 WDR18Q9BV38 432 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 ARHGEF10LQ9HCE6 1279 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 MTMR4Q9NYA4 1195 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 CLIP2Q9UDT6 1046 aa21.03■□□□□ 0.96
CPNE1-224ENST00000483359 MYH4Q9Y623 1939 aa21.02■□□□□ 0.96
CPNE1-224ENST00000483359 USP17L10C9JJH3 530 aa21.02■□□□□ 0.96
CPNE1-224ENST00000483359 KIF23Q02241 960 aaPredicted RBP21.02■□□□□ 0.96
CPNE1-224ENST00000483359 IQCA1Q86XH1 822 aa21.02■□□□□ 0.96
CPNE1-224ENST00000483359 LRRC47Q8N1G4 583 aaKnown RBP21.02■□□□□ 0.96
CPNE1-224ENST00000483359 JAKMIP1Q96N16 626 aaKnown RBP21.02■□□□□ 0.96
CPNE1-224ENST00000483359 NEK1Q96PY6 1258 aa21.02■□□□□ 0.96
CPNE1-224ENST00000483359 KCNH4Q9UQ05 1017 aa21.02■□□□□ 0.96
CPNE1-224ENST00000483359 CCL15-CCL14A0A0B4J2E2 113 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 TTLL1O95922 423 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 GTF2A2P52657 109 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 CCL15Q16663 113 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 KCNB2Q92953 911 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 CHMP4CQ96CF2 233 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 MS4A4AQ96JQ5 239 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 UBAC1Q9BSL1 405 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 TNKSO95271 1327 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 CPA1P15085 419 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 BACE1P56817 501 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 KRT32Q14532 448 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 TSGA10IPQ3SY00 556 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 GADL1Q6ZQY3 521 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 TCEANC2Q96MN5 208 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 BACH2Q9BYV9 841 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 TBC1D2Q9BYX2 928 aa21.01■□□□□ 0.95
CPNE1-224ENST00000483359 CXCL11O14625 94 aa21■□□□□ 0.95
CPNE1-224ENST00000483359 ANTXR2P58335 489 aa21■□□□□ 0.95
CPNE1-224ENST00000483359 ZSCAN10Q96SZ4 725 aaPredicted RBP21■□□□□ 0.95
CPNE1-224ENST00000483359 A0A0G2JLL6 359 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-224ENST00000483359 PRRT2Q7Z6L0 340 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-224ENST00000483359 SPICE1Q8N0Z3 855 aa20.99■□□□□ 0.95
CPNE1-224ENST00000483359 BRI3BPQ8WY22 251 aa20.99■□□□□ 0.95
CPNE1-224ENST00000483359 LRRC2Q9BYS8 371 aa20.99■□□□□ 0.95
CPNE1-224ENST00000483359 NYAP2Q9P242 653 aa20.99■□□□□ 0.95
CPNE1-224ENST00000483359 MTMR7Q9Y216 660 aa20.99■□□□□ 0.95
CPNE1-224ENST00000483359 THSD7BQ9C0I4 1608 aa20.99■□□□□ 0.95
CPNE1-224ENST00000483359 MANSC4A6NHS7 340 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-224ENST00000483359 PRC1O43663 620 aa20.99■□□□□ 0.95
CPNE1-224ENST00000483359 CETPP11597 493 aa20.98■□□□□ 0.95
CPNE1-224ENST00000483359 CASTP20810 708 aaKnown RBP20.98■□□□□ 0.95
CPNE1-224ENST00000483359 MCM5P33992 734 aa20.98■□□□□ 0.95
CPNE1-224ENST00000483359 DNAJC5GQ8N7S2 189 aa20.98■□□□□ 0.95
CPNE1-224ENST00000483359 ENAHQ8N8S7 591 aaPredicted RBP20.98■□□□□ 0.95
CPNE1-224ENST00000483359 KIAA1683Q9H0B3 1180 aa20.98■□□□□ 0.95
CPNE1-224ENST00000483359 SH2D4AQ9H788 454 aa20.98■□□□□ 0.95
CPNE1-224ENST00000483359 UPF2Q9HAU5 1272 aaKnown RBP20.98■□□□□ 0.95
CPNE1-224ENST00000483359 EMILIN3Q9NT22 766 aa20.98■□□□□ 0.95
CPNE1-224ENST00000483359 TCP11L1Q9NUJ3 509 aa20.98■□□□□ 0.95
CPNE1-224ENST00000483359 TMX2Q9Y320 296 aa20.98■□□□□ 0.95
CPNE1-224ENST00000483359 IFIT3O14879 490 aaKnown RBP20.97■□□□□ 0.95
CPNE1-224ENST00000483359 NT5C2P49902 561 aa20.97■□□□□ 0.95
CPNE1-224ENST00000483359 RCSD1Q6JBY9 416 aa20.97■□□□□ 0.95
CPNE1-224ENST00000483359 TMOD4Q9NZQ9 345 aa20.97■□□□□ 0.95
CPNE1-224ENST00000483359 LOC285556D6RIA3 1793 aa20.97■□□□□ 0.95
CPNE1-224ENST00000483359 SREBF2Q12772 1141 aa20.97■□□□□ 0.95
CPNE1-224ENST00000483359 MOGSQ13724 837 aa20.97■□□□□ 0.95
CPNE1-224ENST00000483359 KIAA1755Q5JYT7 1200 aa20.97■□□□□ 0.95
CPNE1-224ENST00000483359 TREML2Q5T2D2 321 aa20.97■□□□□ 0.95
CPNE1-224ENST00000483359 RASGRP2Q7LDG7 609 aa20.97■□□□□ 0.95
CPNE1-224ENST00000483359 PTPN18Q99952 460 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms