RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 MCMDC2Q4G0Z9 681 aa18.06■□□□□ 0.48
COL16A1-213ENST00000482910 SMCR8Q8TEV9 937 aaPredicted RBP18.06■□□□□ 0.48
COL16A1-213ENST00000482910 RILPL2Q969X0 211 aa18.06■□□□□ 0.48
COL16A1-213ENST00000482910 ZNF287Q9HBT7 754 aa18.06■□□□□ 0.48
COL16A1-213ENST00000482910 SMIM22K7EJ46 135 aa18.05■□□□□ 0.48
COL16A1-213ENST00000482910 MPHOSPH10O00566 681 aaKnown RBP18.05■□□□□ 0.48
COL16A1-213ENST00000482910 PDE4AP27815 886 aa18.05■□□□□ 0.48
COL16A1-213ENST00000482910 FEZ1Q99689 392 aa18.05■□□□□ 0.48
COL16A1-213ENST00000482910 NAPBQ9H115 298 aa18.05■□□□□ 0.48
COL16A1-213ENST00000482910 ASCC2Q9H1I8 757 aaPredicted RBP18.05■□□□□ 0.48
COL16A1-213ENST00000482910 EMILIN3Q9NT22 766 aa18.05■□□□□ 0.48
COL16A1-213ENST00000482910 GREB1LQ9C091 1923 aaPredicted RBP18.05■□□□□ 0.48
COL16A1-213ENST00000482910 A0A0D9SFI3 127 aa18.04■□□□□ 0.48
COL16A1-213ENST00000482910 MINDY4BA8MYZ0 360 aa18.04■□□□□ 0.48
COL16A1-213ENST00000482910 HIP1O00291 1037 aa18.04■□□□□ 0.48
COL16A1-213ENST00000482910 AKR1B1P15121 316 aa18.04■□□□□ 0.48
COL16A1-213ENST00000482910 SDSP20132 328 aa18.04■□□□□ 0.48
COL16A1-213ENST00000482910 PRMT2P55345 433 aa18.04■□□□□ 0.48
COL16A1-213ENST00000482910 CAP1Q01518 475 aa18.04■□□□□ 0.48
COL16A1-213ENST00000482910 ALX1Q15699 326 aa18.04■□□□□ 0.48
COL16A1-213ENST00000482910 FAM110CQ1W6H9 321 aa18.04■□□□□ 0.48
COL16A1-213ENST00000482910 ACER1Q8TDN7 264 aa18.04■□□□□ 0.48
COL16A1-213ENST00000482910 HPS5Q9UPZ3 1129 aa18.04■□□□□ 0.48
COL16A1-213ENST00000482910 MGAMO43451 1857 aa18.03■□□□□ 0.48
COL16A1-213ENST00000482910 FOXP2O15409 715 aa18.03■□□□□ 0.48
COL16A1-213ENST00000482910 IRX3P78415 501 aaPredicted RBP18.03■□□□□ 0.48
COL16A1-213ENST00000482910 CCDC129Q6ZRS4 1044 aa18.03■□□□□ 0.48
COL16A1-213ENST00000482910 GTF3C2Q8WUA4 911 aaPredicted RBP18.03■□□□□ 0.48
COL16A1-213ENST00000482910 FAM227BQ96M60 508 aa18.03■□□□□ 0.48
COL16A1-213ENST00000482910 SH2D4AQ9H788 454 aa18.03■□□□□ 0.48
COL16A1-213ENST00000482910 PTPN22Q9Y2R2 807 aa18.03■□□□□ 0.48
COL16A1-213ENST00000482910 ZMYM6O95789 1325 aa18.02■□□□□ 0.48
COL16A1-213ENST00000482910 SLC3A2P08195 630 aaKnown RBP18.02■□□□□ 0.48
COL16A1-213ENST00000482910 RASA1P20936 1047 aa18.02■□□□□ 0.48
COL16A1-213ENST00000482910 MFAP1P55081 439 aaKnown RBP18.02■□□□□ 0.48
COL16A1-213ENST00000482910 ICA1Q05084 483 aa18.02■□□□□ 0.48
COL16A1-213ENST00000482910 NMIQ13287 307 aaPredicted RBP18.02■□□□□ 0.48
COL16A1-213ENST00000482910 KANSL2Q9H9L4 492 aa18.02■□□□□ 0.48
COL16A1-213ENST00000482910 MKNK2Q9HBH9 465 aa18.02■□□□□ 0.48
COL16A1-213ENST00000482910 ARHGEF10LQ9HCE6 1279 aa18.02■□□□□ 0.48
COL16A1-213ENST00000482910 CCDC171Q6TFL3 1326 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 ZSWIM8A7E2V4 1837 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 A0A1W2PRG0 241 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 USP17L15C9J2P7 530 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 USP17L13C9JLJ4 530 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 USP17L11C9JVI0 530 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 USP17L18D6R9N7 530 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 USP17L22D6RA61 530 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 USP17L17D6RBQ6 530 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 USP17L19D6RCP7 530 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 USP17L20D6RJB6 530 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 HOXD10P28358 340 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 PSMC4P43686 418 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 PDE4BQ07343 736 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 PPARAQ07869 468 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 USP17L24Q0WX57 530 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 TTC22Q5TAA0 569 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 LPAR1Q92633 364 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 ARHGAP39Q9C0H5 1083 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 MORF4L1Q9UBU8 362 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 ANAPC4Q9UJX5 808 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 TMX2Q9Y320 296 aa18.01■□□□□ 0.47
COL16A1-213ENST00000482910 VCAM1P19320 739 aa18■□□□□ 0.47
COL16A1-213ENST00000482910 FCGRTP55899 365 aa18■□□□□ 0.47
COL16A1-213ENST00000482910 HERVK_113P62684 666 aa18■□□□□ 0.47
COL16A1-213ENST00000482910 VPS53Q5VIR6 699 aa18■□□□□ 0.47
COL16A1-213ENST00000482910 SIAH1Q8IUQ4 282 aa18■□□□□ 0.47
COL16A1-213ENST00000482910 ANKRD13CQ8N6S4 541 aa18■□□□□ 0.47
COL16A1-213ENST00000482910 TRIM47Q96LD4 638 aa18■□□□□ 0.47
COL16A1-213ENST00000482910 P2RX7Q99572 595 aaKnown RBP18■□□□□ 0.47
COL16A1-213ENST00000482910 GNL3Q9BVP2 549 aaKnown RBP eCLIP18■□□□□ 0.47
COL16A1-213ENST00000482910 DIAPH3Q9NSV4 1193 aa18■□□□□ 0.47
COL16A1-213ENST00000482910 PLIN4Q96Q06 1357 aa18■□□□□ 0.47
COL16A1-213ENST00000482910 CCDC85CA6NKD9 419 aa17.99■□□□□ 0.47
COL16A1-213ENST00000482910 HSPD1P10809 573 aaKnown RBP17.99■□□□□ 0.47
COL16A1-213ENST00000482910 GSPT1P15170 499 aaKnown RBP17.99■□□□□ 0.47
COL16A1-213ENST00000482910 CTGFP29279 349 aa17.99■□□□□ 0.47
COL16A1-213ENST00000482910 ZYXQ15942 572 aaKnown RBP17.99■□□□□ 0.47
COL16A1-213ENST00000482910 LBX2Q6XYB7 198 aa17.99■□□□□ 0.47
COL16A1-213ENST00000482910 CATSPERGQ6ZRH7 1159 aa17.99■□□□□ 0.47
COL16A1-213ENST00000482910 CENPQQ7L2Z9 268 aaPredicted RBP17.99■□□□□ 0.47
COL16A1-213ENST00000482910 ZNF589Q86UQ0 364 aaPredicted RBP17.99■□□□□ 0.47
COL16A1-213ENST00000482910 ZNF444Q8N0Y2 327 aaPredicted RBP17.99■□□□□ 0.47
COL16A1-213ENST00000482910 VCPKMTQ9H867 229 aa17.99■□□□□ 0.47
COL16A1-213ENST00000482910 SRRDQ9UH36 339 aa17.99■□□□□ 0.47
COL16A1-213ENST00000482910 FMNL1O95466 1100 aaPredicted RBP17.98■□□□□ 0.47
COL16A1-213ENST00000482910 ARMC5Q96C12 935 aa17.98■□□□□ 0.47
COL16A1-213ENST00000482910 NYAP2Q9P242 653 aa17.98■□□□□ 0.47
COL16A1-213ENST00000482910 IGKV6D-41A0A0C4DH26 115 aa17.97■□□□□ 0.47
COL16A1-213ENST00000482910 SLC34A2O95436 690 aa17.97■□□□□ 0.47
COL16A1-213ENST00000482910 FGAP02671 866 aa17.97■□□□□ 0.47
COL16A1-213ENST00000482910 EEF2P13639 858 aaKnown RBP17.97■□□□□ 0.47
COL16A1-213ENST00000482910 RPAP3Q9H6T3 665 aaPredicted RBP17.97■□□□□ 0.47
COL16A1-213ENST00000482910 SYNPO2Q9UMS6 1093 aa17.97■□□□□ 0.47
COL16A1-213ENST00000482910 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.97■□□□□ 0.47
COL16A1-213ENST00000482910 PTCH2Q9Y6C5 1203 aa17.97■□□□□ 0.47
COL16A1-213ENST00000482910 DOCK3Q8IZD9 2030 aa17.97■□□□□ 0.47
COL16A1-213ENST00000482910 HTTP42858 3142 aa17.97■□□□□ 0.47
COL16A1-213ENST00000482910 WDR46O15213 610 aaKnown RBP17.96■□□□□ 0.47
COL16A1-213ENST00000482910 FGRP09769 529 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms