RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 LMCD1Q9NZU5 365 aa6.32□□□□□ -1.4
GTF3A-207ENST00000482655 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
GTF3A-207ENST00000482655 CEP131Q9UPN4 1083 aa6.32□□□□□ -1.4
GTF3A-207ENST00000482655 CCDC9Q9Y3X0 531 aaKnown RBP6.32□□□□□ -1.4
GTF3A-207ENST00000482655 UPK3BL1B0FP48 263 aa6.31□□□□□ -1.4
GTF3A-207ENST00000482655 UPK3BL2E5RIL1 263 aa6.31□□□□□ -1.4
GTF3A-207ENST00000482655 TLR3O15455 904 aaKnown RBP6.31□□□□□ -1.4
GTF3A-207ENST00000482655 ZNF16P17020 682 aaPredicted RBP6.31□□□□□ -1.4
GTF3A-207ENST00000482655 EIF4A3P38919 411 aaKnown RBP6.31□□□□□ -1.4
GTF3A-207ENST00000482655 MFAP1P55081 439 aaKnown RBP6.31□□□□□ -1.4
GTF3A-207ENST00000482655 SLFN12Q8IYM2 578 aa6.31□□□□□ -1.4
GTF3A-207ENST00000482655 PHACTR4Q8IZ21 702 aa6.31□□□□□ -1.4
GTF3A-207ENST00000482655 PIWIL2Q8TC59 973 aaKnown RBP6.31□□□□□ -1.4
GTF3A-207ENST00000482655 UBE2FQ969M7 185 aa6.31□□□□□ -1.4
GTF3A-207ENST00000482655 CARS2Q9HA77 564 aaKnown RBP6.31□□□□□ -1.4
GTF3A-207ENST00000482655 SEMA3GQ9NS98 782 aa6.31□□□□□ -1.4
GTF3A-207ENST00000482655 ZSWIM5Q9P217 1185 aa6.31□□□□□ -1.4
GTF3A-207ENST00000482655 KCNH3Q9ULD8 1083 aa6.31□□□□□ -1.4
GTF3A-207ENST00000482655 ST14Q9Y5Y6 855 aa6.31□□□□□ -1.4
GTF3A-207ENST00000482655 ROBO2Q9HCK4 1378 aa6.31□□□□□ -1.4
GTF3A-207ENST00000482655 PRR36Q9H6K5 1346 aa6.3□□□□□ -1.4
GTF3A-207ENST00000482655 TNK2Q07912 1038 aa6.3□□□□□ -1.4
GTF3A-207ENST00000482655 FBXL19Q6PCT2 694 aa6.3□□□□□ -1.4
GTF3A-207ENST00000482655 TMEM87AQ8NBN3 555 aa6.3□□□□□ -1.4
GTF3A-207ENST00000482655 FBXO27Q8NI29 283 aa6.3□□□□□ -1.4
GTF3A-207ENST00000482655 TRIT1Q9H3H1 467 aaKnown RBP6.3□□□□□ -1.4
GTF3A-207ENST00000482655 POLR3KQ9Y2Y1 108 aaPredicted RBP6.3□□□□□ -1.4
GTF3A-207ENST00000482655 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
GTF3A-207ENST00000482655 GARTP22102 1010 aa6.29□□□□□ -1.4
GTF3A-207ENST00000482655 FLAD1Q8NFF5 587 aa6.29□□□□□ -1.4
GTF3A-207ENST00000482655 ZNF296Q8WUU4 475 aaPredicted RBP6.29□□□□□ -1.4
GTF3A-207ENST00000482655 FAM168AQ92567 244 aa6.29□□□□□ -1.4
GTF3A-207ENST00000482655 CCDC120Q96HB5 630 aa6.29□□□□□ -1.4
GTF3A-207ENST00000482655 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
GTF3A-207ENST00000482655 GPATCH2Q9NW75 528 aa6.29□□□□□ -1.4
GTF3A-207ENST00000482655 TMPRSS7Q7RTY8 843 aa6.28□□□□□ -1.4
GTF3A-207ENST00000482655 PPP1R13LQ8WUF5 828 aa6.28□□□□□ -1.4
GTF3A-207ENST00000482655 RNF141Q8WVD5 230 aa6.28□□□□□ -1.4
GTF3A-207ENST00000482655 CCDC74BQ96LY2 380 aa6.28□□□□□ -1.4
GTF3A-207ENST00000482655 LRRC3Q9BY71 257 aa6.28□□□□□ -1.4
GTF3A-207ENST00000482655 GOLGA2P5Q9HBQ8 144 aa6.28□□□□□ -1.4
GTF3A-207ENST00000482655 BRMS1Q9HCU9 246 aa6.28□□□□□ -1.4
GTF3A-207ENST00000482655 KCNQ5Q9NR82 932 aa6.28□□□□□ -1.4
GTF3A-207ENST00000482655 PCDHB14Q9Y5E9 798 aa6.28□□□□□ -1.4
GTF3A-207ENST00000482655 CHURC1-FNTBB4DL54 471 aa6.27□□□□□ -1.41
GTF3A-207ENST00000482655 GBP1P32455 592 aa6.27□□□□□ -1.41
GTF3A-207ENST00000482655 ZNF76P36508 570 aa6.27□□□□□ -1.41
GTF3A-207ENST00000482655 APOBRQ0VD83 1088 aa6.27□□□□□ -1.41
GTF3A-207ENST00000482655 GREM1O60565 184 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 RAG1P15918 1043 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 MCM4P33991 863 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 AFMP43652 599 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 KCNMB1Q16558 191 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 SEZ6Q53EL9 994 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 OGFOD2Q6N063 350 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 ZSWIM9Q86XI8 627 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 CREG2Q8IUH2 290 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 DTWD2Q8NBA8 298 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 BAHD1Q8TBE0 780 aaPredicted RBP6.26□□□□□ -1.41
GTF3A-207ENST00000482655 Q96M66 194 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 KREMEN1Q96MU8 473 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 ALPK1Q96QP1 1244 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 KIF2CQ99661 725 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 ASPNQ9BXN1 380 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 UBP1Q9NZI7 540 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 SLAMF8Q9P0V8 285 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 GMIPQ9P107 970 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 ADAMTS1Q9UHI8 967 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 CTNND2Q9UQB3 1225 aa6.26□□□□□ -1.41
GTF3A-207ENST00000482655 KRTAP9-6A0A140TA67 174 aa6.25□□□□□ -1.41
GTF3A-207ENST00000482655 TPP2P29144 1249 aaPredicted RBP6.25□□□□□ -1.41
GTF3A-207ENST00000482655 RANGAP1P46060 587 aaPredicted RBP6.25□□□□□ -1.41
GTF3A-207ENST00000482655 CRKP46108 304 aa6.25□□□□□ -1.41
GTF3A-207ENST00000482655 ARSHQ5FYA8 562 aa6.25□□□□□ -1.41
GTF3A-207ENST00000482655 KIAA0825Q8IV33 1275 aa6.25□□□□□ -1.41
GTF3A-207ENST00000482655 TMEM40Q8WWA1 233 aa6.25□□□□□ -1.41
GTF3A-207ENST00000482655 SYTL4Q96C24 671 aaPredicted RBP6.25□□□□□ -1.41
GTF3A-207ENST00000482655 DUSP13Q9UII6 198 aa6.25□□□□□ -1.41
GTF3A-207ENST00000482655 CARMIL2Q6F5E8 1435 aa6.25□□□□□ -1.41
GTF3A-207ENST00000482655 DNAJA2O60884 412 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 RAC2P15153 192 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 YBX3P16989 372 aaKnown RBP eCLIP6.24□□□□□ -1.414e-8■■□□□ 14.1
GTF3A-207ENST00000482655 LTKP29376 864 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 GDNFP39905 211 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 ZNF165P49910 485 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 RNF4P78317 190 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 CLEC16AQ2KHT3 1053 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 GK5Q6ZS86 529 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 KIRREL1Q96J84 757 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 SPON2Q9BUD6 331 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 BACH2Q9BYV9 841 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 GPR62Q9BZJ7 368 aa6.24□□□□□ -1.41
GTF3A-207ENST00000482655 ASCC2Q9H1I8 757 aaPredicted RBP6.24□□□□□ -1.41
GTF3A-207ENST00000482655 DUSP15Q9H1R2 295 aaPredicted RBP6.24□□□□□ -1.41
GTF3A-207ENST00000482655 METTL5Q9NRN9 209 aaKnown RBP6.24□□□□□ -1.41
GTF3A-207ENST00000482655 RBM47A0AV96 593 aaKnown RBP6.23□□□□□ -1.41
GTF3A-207ENST00000482655 SLC22A31A6NKX4 558 aa6.23□□□□□ -1.41
GTF3A-207ENST00000482655 RGS13O14921 159 aa6.23□□□□□ -1.41
GTF3A-207ENST00000482655 LRRN2O75325 713 aa6.23□□□□□ -1.41
GTF3A-207ENST00000482655 ATE1O95260 518 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms