RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 GNAT2P19087 354 aa11.96□□□□□ -0.49
SPTLC1-206ENST00000482632 CAP2P40123 477 aa11.96□□□□□ -0.49
SPTLC1-206ENST00000482632 TM4SF4P48230 202 aa11.96□□□□□ -0.49
SPTLC1-206ENST00000482632 INHBEP58166 350 aa11.96□□□□□ -0.49
SPTLC1-206ENST00000482632 NMIQ13287 307 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1-206ENST00000482632 CERKLQ49MI3 558 aaPredicted RBP11.96□□□□□ -0.49
SPTLC1-206ENST00000482632 DYNLL2Q96FJ2 89 aa11.96□□□□□ -0.49
SPTLC1-206ENST00000482632 FAM227BQ96M60 508 aa11.96□□□□□ -0.49
SPTLC1-206ENST00000482632 OSBPL3Q9H4L5 887 aa11.96□□□□□ -0.49
SPTLC1-206ENST00000482632 PLSCR2Q9NRY7 297 aa11.96□□□□□ -0.49
SPTLC1-206ENST00000482632 A0A0D9SFI3 127 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 IGF2BP3O00425 579 aaKnown RBP eCLIP11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 GH2P01242 217 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 MAP3K10Q02779 954 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 RRP1BQ14684 758 aaKnown RBP11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 RAB3GAP1Q15042 981 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 TAF1CQ15572 869 aaPredicted RBP11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 SHROOM1Q2M3G4 852 aaPredicted RBP11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 TTC22Q5TAA0 569 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 SLC44A5Q8NCS7 719 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 BRI3BPQ8WY22 251 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 NACAP1Q9BZK3 213 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 NAPBQ9H115 298 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 EHD4Q9H223 541 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 AS3MTQ9HBK9 375 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 CABP5Q9NP86 173 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 SAGE1Q9NXZ1 904 aa11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 ARPP21Q9UBL0 812 aaPredicted RBP11.95□□□□□ -0.5
SPTLC1-206ENST00000482632 PDE4DIPQ5VU43 2346 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 USP17L5A8MUK1 530 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 GSG1L2A8MUP6 293 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 ALDH1A1P00352 501 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 ASNSP08243 561 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 SDSP20132 328 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 SPP2Q13103 211 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 NBR1Q14596 966 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 ZYXQ15942 572 aaKnown RBP11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 ABCB5Q2M3G0 1257 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 CTR9Q6PD62 1173 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 CWC27Q6UX04 472 aaKnown RBP11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 SKAP1Q86WV1 359 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 FEZ1Q99689 392 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 EPB41L4AQ9HCS5 686 aaPredicted RBP11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 HELLSQ9NRZ9 838 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 ZBTB21Q9ULJ3 1066 aa11.94□□□□□ -0.5
SPTLC1-206ENST00000482632 PATL2C9JE40 543 aaKnown RBP11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 BTBD19C9JJ37 291 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 SMIM22K7EJ46 135 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 HIP1O00291 1037 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 SHMT1P34896 483 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 MCMDC2Q4G0Z9 681 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 LCE2DQ5TA82 110 aaPredicted RBP11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 C12orf60Q5U649 245 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 IFNL3Q8IZI9 196 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 FAM43AQ8N2R8 423 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 ZNF280CQ8ND82 737 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 PTPN18Q99952 460 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 MKNK2Q9HBH9 465 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 SWAP70Q9UH65 585 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 KCNH4Q9UQ05 1017 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 AFG3L2Q9Y4W6 797 aa11.93□□□□□ -0.5
SPTLC1-206ENST00000482632 PDHXO00330 501 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 CXCL11O14625 94 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 GSPT1P15170 499 aaKnown RBP11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 CDK8P49336 464 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 HMGCS2P54868 508 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 MFAP1P55081 439 aaKnown RBP11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 JAG1P78504 1218 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 ATP2B2Q01814 1243 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 CRHR2Q13324 411 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 MTMR2Q13614 643 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 METTL16Q86W50 562 aaKnown RBP11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 CRISPLD2Q9H0B8 497 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 ZFYVE28Q9HCC9 887 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 TMOD4Q9NZQ9 345 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 LOC285556D6RIA3 1793 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 MYH4Q9Y623 1939 aa11.92□□□□□ -0.5
SPTLC1-206ENST00000482632 CCDC171Q6TFL3 1326 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 A0A0G2JLL6 359 aaPredicted RBP11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 TESPA1A2RU30 521 aaPredicted RBP11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 RAD21O60216 631 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 SLC3A2P08195 630 aaKnown RBP11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 GABPAQ06546 454 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 DGKZQ13574 1117 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 SEPT2Q15019 361 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 VPS53Q5VIR6 699 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 TATDN1Q6P1N9 297 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 GIMAP6Q6P9H5 292 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 C16orf86Q6ZW13 317 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 FASTKD5Q7L8L6 764 aaKnown RBP11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 ZNF589Q86UQ0 364 aaPredicted RBP11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 TBC1D2Q9BYX2 928 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 R3HDMLQ9H3Y0 253 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 TOMM22Q9NS69 142 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 GINM1Q9NU53 330 aa11.91□□□□□ -0.5
SPTLC1-206ENST00000482632 GPR25O00155 361 aa11.9□□□□□ -0.5
SPTLC1-206ENST00000482632 PRDM1O75626 825 aa11.9□□□□□ -0.5
SPTLC1-206ENST00000482632 AKR1B1P15121 316 aa11.9□□□□□ -0.5
SPTLC1-206ENST00000482632 CTDSPL2Q05D32 466 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms