RNA–Protein interactions for RNA: ENST00000482401.6

CAPN8-209, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-209ENST00000482401 LRCH3Q96II8 777 aa16.86■□□□□ 0.29
CAPN8-209ENST00000482401 PORCNQ9H237 461 aa16.86■□□□□ 0.29
CAPN8-209ENST00000482401 SIPA1L1O43166 1804 aa16.86■□□□□ 0.29
CAPN8-209ENST00000482401 ALPK3Q96L96 1907 aa16.86■□□□□ 0.29
CAPN8-209ENST00000482401 DNAH12Q6ZR08 3092 aa16.85■□□□□ 0.29
CAPN8-209ENST00000482401 MAGEA10P43363 369 aaPredicted RBP16.85■□□□□ 0.29
CAPN8-209ENST00000482401 MAP2K5Q13163 448 aa16.85■□□□□ 0.29
CAPN8-209ENST00000482401 RAB3GAP1Q15042 981 aa16.85■□□□□ 0.29
CAPN8-209ENST00000482401 MFSD14CQ5VZR4 134 aa16.85■□□□□ 0.29
CAPN8-209ENST00000482401 ERC1Q8IUD2 1116 aa16.85■□□□□ 0.29
CAPN8-209ENST00000482401 TDHQ8IZJ6 230 aa16.85■□□□□ 0.29
CAPN8-209ENST00000482401 MAGEB6Q8N7X4 407 aa16.85■□□□□ 0.29
CAPN8-209ENST00000482401 EDC3Q96F86 508 aaKnown RBP16.85■□□□□ 0.29
CAPN8-209ENST00000482401 YTHDC1Q96MU7 727 aaKnown RBP16.85■□□□□ 0.29
CAPN8-209ENST00000482401 KIAA1683Q9H0B3 1180 aa16.85■□□□□ 0.29
CAPN8-209ENST00000482401 CCDC8Q9H0W5 538 aaPredicted RBP16.85■□□□□ 0.29
CAPN8-209ENST00000482401 DBNLQ9UJU6 430 aaKnown RBP16.85■□□□□ 0.29
CAPN8-209ENST00000482401 DDX60LQ5H9U9 1706 aaKnown RBP16.84■□□□□ 0.29
CAPN8-209ENST00000482401 CDK5RAP2Q96SN8 1893 aa16.84■□□□□ 0.29
CAPN8-209ENST00000482401 SLC15A5A6NIM6 579 aa16.84■□□□□ 0.29
CAPN8-209ENST00000482401 COL6A1P12109 1028 aa16.84■□□□□ 0.29
CAPN8-209ENST00000482401 SYN1P17600 705 aa16.84■□□□□ 0.29
CAPN8-209ENST00000482401 ABCB5Q2M3G0 1257 aa16.84■□□□□ 0.29
CAPN8-209ENST00000482401 SHROOM1Q2M3G4 852 aaPredicted RBP16.84■□□□□ 0.29
CAPN8-209ENST00000482401 LHX8Q68G74 356 aa16.84■□□□□ 0.29
CAPN8-209ENST00000482401 CATSPERGQ6ZRH7 1159 aa16.84■□□□□ 0.29
CAPN8-209ENST00000482401 ITPRIPQ8IWB1 547 aa16.84■□□□□ 0.29
CAPN8-209ENST00000482401 MIGA1Q8NAN2 632 aa16.84■□□□□ 0.29
CAPN8-209ENST00000482401 UBE2OQ9C0C9 1292 aaKnown RBP16.84■□□□□ 0.29
CAPN8-209ENST00000482401 IVNS1ABPQ9Y6Y0 642 aa16.84■□□□□ 0.29
CAPN8-209ENST00000482401 PFASO15067 1338 aa16.83■□□□□ 0.28
CAPN8-209ENST00000482401 MSCO60682 206 aa16.83■□□□□ 0.28
CAPN8-209ENST00000482401 PEX10O60683 326 aa16.83■□□□□ 0.28
CAPN8-209ENST00000482401 CCND3P30281 292 aaPredicted RBP16.83■□□□□ 0.28
CAPN8-209ENST00000482401 ZYXQ15942 572 aaKnown RBP16.83■□□□□ 0.28
CAPN8-209ENST00000482401 CCL14Q16627 93 aa16.83■□□□□ 0.28
CAPN8-209ENST00000482401 WDR78Q5VTH9 848 aa16.83■□□□□ 0.28
CAPN8-209ENST00000482401 ZBED9Q6R2W3 1325 aa16.83■□□□□ 0.28
CAPN8-209ENST00000482401 LBX2Q6XYB7 198 aa16.83■□□□□ 0.28
CAPN8-209ENST00000482401 DEFB123Q8N688 67 aa16.83■□□□□ 0.28
CAPN8-209ENST00000482401 EAF2Q96CJ1 260 aaPredicted RBP16.83■□□□□ 0.28
CAPN8-209ENST00000482401 DLL1O00548 723 aa16.82■□□□□ 0.28
CAPN8-209ENST00000482401 PTPREP23469 700 aa16.82■□□□□ 0.28
CAPN8-209ENST00000482401 ATP2B2Q01814 1243 aa16.82■□□□□ 0.28
CAPN8-209ENST00000482401 TTF1Q15361 905 aaPredicted RBP16.82■□□□□ 0.28
CAPN8-209ENST00000482401 HSP90AB4PQ58FF6 505 aa16.82■□□□□ 0.28
CAPN8-209ENST00000482401 C1orf115Q9H7X2 142 aa16.82■□□□□ 0.28
CAPN8-209ENST00000482401 TLR7Q9NYK1 1049 aaKnown RBP16.82■□□□□ 0.28
CAPN8-209ENST00000482401 MYH1P12882 1939 aa16.82■□□□□ 0.28
CAPN8-209ENST00000482401 CNMDO75829 334 aa16.81■□□□□ 0.28
CAPN8-209ENST00000482401 POLR3DP05423 398 aaPredicted RBP16.81■□□□□ 0.28
CAPN8-209ENST00000482401 VCAM1P19320 739 aa16.81■□□□□ 0.28
CAPN8-209ENST00000482401 HOXC10Q9NYD6 342 aa16.81■□□□□ 0.28
CAPN8-209ENST00000482401 MAGEB6P1A0A0J9YX57 407 aa16.8■□□□□ 0.28
CAPN8-209ENST00000482401 HOXC6P09630 235 aa16.8■□□□□ 0.28
CAPN8-209ENST00000482401 LRRC26Q2I0M4 334 aa16.8■□□□□ 0.28
CAPN8-209ENST00000482401 POTEEQ6S8J3 1075 aa16.8■□□□□ 0.28
CAPN8-209ENST00000482401 CRNKL1Q9BZJ0 848 aaKnown RBP16.8■□□□□ 0.28
CAPN8-209ENST00000482401 RPAP3Q9H6T3 665 aaPredicted RBP16.8■□□□□ 0.28
CAPN8-209ENST00000482401 MYO5AQ9Y4I1 1855 aaKnown RBP16.8■□□□□ 0.28
CAPN8-209ENST00000482401 STRNO43815 780 aa16.79■□□□□ 0.28
CAPN8-209ENST00000482401 CNGA1P29973 690 aa16.79■□□□□ 0.28
CAPN8-209ENST00000482401 GRB14Q14449 540 aa16.79■□□□□ 0.28
CAPN8-209ENST00000482401 AACSQ86V21 672 aa16.79■□□□□ 0.28
CAPN8-209ENST00000482401 ACER1Q8TDN7 264 aa16.79■□□□□ 0.28
CAPN8-209ENST00000482401 LPAR1Q92633 364 aa16.79■□□□□ 0.28
CAPN8-209ENST00000482401 LBHD1Q9BQE6 289 aaPredicted RBP16.79■□□□□ 0.28
CAPN8-209ENST00000482401 SENP6Q9GZR1 1112 aaPredicted RBP16.79■□□□□ 0.28
CAPN8-209ENST00000482401 DDX20Q9UHI6 824 aaKnown RBP16.79■□□□□ 0.28
CAPN8-209ENST00000482401 STXBP5LQ9Y2K9 1186 aa16.79■□□□□ 0.28
CAPN8-209ENST00000482401 SHMT1P34896 483 aa16.78■□□□□ 0.28
CAPN8-209ENST00000482401 PLCD1P51178 756 aa16.78■□□□□ 0.28
CAPN8-209ENST00000482401 COG2Q14746 738 aa16.78■□□□□ 0.28
CAPN8-209ENST00000482401 CEP85Q6P2H3 762 aa16.78■□□□□ 0.28
CAPN8-209ENST00000482401 DPP9Q86TI2 863 aa16.78■□□□□ 0.28
CAPN8-209ENST00000482401 RIOK1Q9BRS2 568 aaKnown RBP16.78■□□□□ 0.28
CAPN8-209ENST00000482401 ANTXR1Q9H6X2 564 aa16.78■□□□□ 0.28
CAPN8-209ENST00000482401 SLC5A4Q9NY91 659 aa16.78■□□□□ 0.28
CAPN8-209ENST00000482401 BTBD7Q9P203 1132 aa16.78■□□□□ 0.28
CAPN8-209ENST00000482401 PRKAG2Q9UGJ0 569 aa16.78■□□□□ 0.28
CAPN8-209ENST00000482401 NDUFB9Q9Y6M9 179 aa16.78■□□□□ 0.28
CAPN8-209ENST00000482401 LAMA2P24043 3122 aaKnown RBP16.78■□□□□ 0.28
CAPN8-209ENST00000482401 SPDYE16A6NNV3 312 aaPredicted RBP16.77■□□□□ 0.28
CAPN8-209ENST00000482401 DNM1LO00429 736 aa16.77■□□□□ 0.28
CAPN8-209ENST00000482401 SLC9C2Q5TAH2 1124 aa16.77■□□□□ 0.28
CAPN8-209ENST00000482401 MB21D1Q8N884 522 aa16.77■□□□□ 0.28
CAPN8-209ENST00000482401 ARRDC4Q8NCT1 418 aa16.77■□□□□ 0.28
CAPN8-209ENST00000482401 FLRT1Q9NZU1 646 aa16.77■□□□□ 0.28
CAPN8-209ENST00000482401 MPHOSPH10O00566 681 aaKnown RBP16.76■□□□□ 0.27
CAPN8-209ENST00000482401 MDM2Q00987 491 aaPredicted RBP16.76■□□□□ 0.27
CAPN8-209ENST00000482401 GABPAQ06546 454 aa16.76■□□□□ 0.27
CAPN8-209ENST00000482401 SEPT2Q15019 361 aa16.76■□□□□ 0.27
CAPN8-209ENST00000482401 OLFML2BQ68BL8 750 aa16.76■□□□□ 0.27
CAPN8-209ENST00000482401 SHCBP1Q8NEM2 672 aa16.76■□□□□ 0.27
CAPN8-209ENST00000482401 MTMR10Q9NXD2 777 aa16.76■□□□□ 0.27
CAPN8-209ENST00000482401 MCM9Q9NXL9 1143 aa16.76■□□□□ 0.27
CAPN8-209ENST00000482401 SWAP70Q9UH65 585 aa16.76■□□□□ 0.27
CAPN8-209ENST00000482401 EXOC6BQ9Y2D4 811 aa16.76■□□□□ 0.27
CAPN8-209ENST00000482401 CUL9Q8IWT3 2517 aa16.75■□□□□ 0.27
CAPN8-209ENST00000482401 MS4A1P11836 297 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms