RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 HDAC9Q9UKV0 1011 aa13.56□□□□□ -0.24
GGPS1-205ENST00000482013 ATF5Q9Y2D1 282 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-205ENST00000482013 ADAMTSL1Q8N6G6 1762 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 GOLGA6L4A6NEF3 574 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 NMT2O60551 498 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 ENTPD3O75355 529 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 SMARCA1P28370 1054 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 MRE11P49959 708 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 GUCY1B3Q02153 619 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 GRM4Q14833 912 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 SAFBQ15424 915 aaKnown RBP eCLIP13.55□□□□□ -0.24
GGPS1-205ENST00000482013 FAM173BQ6P4H8 233 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 PNMA1Q8ND90 353 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 AGBL3Q8NEM8 1001 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
GGPS1-205ENST00000482013 GMLQ99445 158 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 SGIP1Q9BQI5 828 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 FOXP1Q9H334 677 aaPredicted RBP13.55□□□□□ -0.24
GGPS1-205ENST00000482013 POLR3EQ9NVU0 708 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 TMEM63CQ9P1W3 806 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 SERPINB13Q9UIV8 391 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 ZNRF3Q9ULT6 936 aa13.55□□□□□ -0.24
GGPS1-205ENST00000482013 MMP1P03956 469 aa13.54□□□□□ -0.24
GGPS1-205ENST00000482013 TOP1P11387 765 aaKnown RBP13.54□□□□□ -0.24
GGPS1-205ENST00000482013 RBM5P52756 815 aaKnown RBP eCLIP13.54□□□□□ -0.24
GGPS1-205ENST00000482013 FOSBP53539 338 aa13.54□□□□□ -0.24
GGPS1-205ENST00000482013 PICALMQ13492 652 aa13.54□□□□□ -0.24
GGPS1-205ENST00000482013 CCDC183Q5T5S1 534 aa13.54□□□□□ -0.24
GGPS1-205ENST00000482013 MYSM1Q5VVJ2 828 aa13.54□□□□□ -0.24
GGPS1-205ENST00000482013 OTUD7BQ6GQQ9 843 aa13.54□□□□□ -0.24
GGPS1-205ENST00000482013 FOXP4Q8IVH2 680 aaPredicted RBP13.54□□□□□ -0.24
GGPS1-205ENST00000482013 NIM1KQ8IY84 436 aa13.54□□□□□ -0.24
GGPS1-205ENST00000482013 LTBP3Q9NS15 1303 aa13.54□□□□□ -0.24
GGPS1-205ENST00000482013 GREB1LQ9C091 1923 aaPredicted RBP13.53□□□□□ -0.24
GGPS1-205ENST00000482013 PPFIA3O75145 1194 aa13.53□□□□□ -0.24
GGPS1-205ENST00000482013 NASPP49321 788 aaPredicted RBP13.53□□□□□ -0.24
GGPS1-205ENST00000482013 GNL2Q13823 731 aaKnown RBP13.53□□□□□ -0.24
GGPS1-205ENST00000482013 R3HDM1Q15032 1099 aaKnown RBP13.53□□□□□ -0.24
GGPS1-205ENST00000482013 METTL16Q86W50 562 aaKnown RBP13.53□□□□□ -0.24
GGPS1-205ENST00000482013 MTMR14Q8NCE2 650 aa13.53□□□□□ -0.24
GGPS1-205ENST00000482013 SLC44A5Q8NCS7 719 aa13.53□□□□□ -0.24
GGPS1-205ENST00000482013 KCNG4Q8TDN1 519 aa13.53□□□□□ -0.24
GGPS1-205ENST00000482013 AIFM3Q96NN9 605 aa13.53□□□□□ -0.24
GGPS1-205ENST00000482013 USP28Q96RU2 1077 aa13.53□□□□□ -0.24
GGPS1-205ENST00000482013 TMEM47Q9BQJ4 181 aa13.53□□□□□ -0.24
GGPS1-205ENST00000482013 SH3GLB2Q9NR46 395 aa13.53□□□□□ -0.24
GGPS1-205ENST00000482013 PI4KBQ9UBF8 816 aa13.53□□□□□ -0.24
GGPS1-205ENST00000482013 CNTNAP5Q8WYK1 1306 aa13.53□□□□□ -0.24
GGPS1-205ENST00000482013 IGKV6D-41A0A0C4DH26 115 aa13.52□□□□□ -0.25
GGPS1-205ENST00000482013 PSMD14O00487 310 aa13.52□□□□□ -0.25
GGPS1-205ENST00000482013 PKN1Q16512 942 aa13.52□□□□□ -0.25
GGPS1-205ENST00000482013 SLC4A8Q2Y0W8 1093 aa13.52□□□□□ -0.25
GGPS1-205ENST00000482013 CFAP100Q494V2 611 aa13.52□□□□□ -0.25
GGPS1-205ENST00000482013 FKBP1CQ5VVH2 108 aa13.52□□□□□ -0.25
GGPS1-205ENST00000482013 LRSAM1Q6UWE0 723 aa13.52□□□□□ -0.25
GGPS1-205ENST00000482013 SRBD1Q8N5C6 995 aaKnown RBP13.52□□□□□ -0.25
GGPS1-205ENST00000482013 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.52□□□□□ -0.25
GGPS1-205ENST00000482013 ZNF277Q9NRM2 450 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-205ENST00000482013 TMOD2Q9NZR1 351 aa13.52□□□□□ -0.25
GGPS1-205ENST00000482013 FAM198AQ9UFP1 575 aa13.52□□□□□ -0.25
GGPS1-205ENST00000482013 V9GY48 417 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-205ENST00000482013 ATRNL1Q5VV63 1379 aa13.52□□□□□ -0.25
GGPS1-205ENST00000482013 ARFGEF1Q9Y6D6 1849 aa13.52□□□□□ -0.25
GGPS1-205ENST00000482013 PALM3A6NDB9 673 aaPredicted RBP13.51□□□□□ -0.25
GGPS1-205ENST00000482013 KIF28PB7ZC32 967 aa13.51□□□□□ -0.25
GGPS1-205ENST00000482013 PLEKHA8P1O95397 391 aa13.51□□□□□ -0.25
GGPS1-205ENST00000482013 GUCY1A2P33402 732 aa13.51□□□□□ -0.25
GGPS1-205ENST00000482013 ANO1Q5XXA6 986 aa13.51□□□□□ -0.25
GGPS1-205ENST00000482013 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
GGPS1-205ENST00000482013 OGFOD1Q8N543 542 aa13.51□□□□□ -0.25
GGPS1-205ENST00000482013 LINC00301Q8NCQ3 95 aa13.51□□□□□ -0.25
GGPS1-205ENST00000482013 PHF20Q9BVI0 1012 aa13.51□□□□□ -0.25
GGPS1-205ENST00000482013 TAOK3Q9H2K8 898 aa13.51□□□□□ -0.25
GGPS1-205ENST00000482013 DDX19AQ9NUU7 478 aaKnown RBP13.51□□□□□ -0.25
GGPS1-205ENST00000482013 MTMR4Q9NYA4 1195 aa13.51□□□□□ -0.25
GGPS1-205ENST00000482013 MORC2Q9Y6X9 1032 aaPredicted RBP13.51□□□□□ -0.25
GGPS1-205ENST00000482013 SIPA1L1O43166 1804 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 A0A1W2PQ27 194 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 A0A1W2PQ64 194 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 A0A1W2PQD8 194 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 SPDYE2BA6NHP3 402 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 SPDYE6P0CI01 402 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 SCG2P13521 617 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 SHMT1P34896 483 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 NFIAQ12857 509 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 TNIP1Q15025 636 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 SLC39A14Q15043 492 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 DLGAP5Q15398 846 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 PFKFB3Q16875 520 aaPredicted RBP13.5□□□□□ -0.25
GGPS1-205ENST00000482013 ADALQ6DHV7 355 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 CCDC82Q8N4S0 544 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 JMYQ8N9B5 988 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 JDP2Q8WYK2 163 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 SPZ1Q9BXG8 430 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 BRMS1Q9HCU9 246 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 GJB4Q9NTQ9 266 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 MAD2L2Q9UI95 211 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 STX8Q9UNK0 236 aa13.5□□□□□ -0.25
GGPS1-205ENST00000482013 SPTLC2O15270 562 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms