RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 ECHDC1Q9NTX5 307 aa28.33■■■□□ 2.13
TTC3-217ENST00000481605 MPHOSPH10O00566 681 aaKnown RBP28.32■■■□□ 2.12
TTC3-217ENST00000481605 GTF3C2Q8WUA4 911 aaPredicted RBP28.32■■■□□ 2.12
TTC3-217ENST00000481605 USP17L15C9J2P7 530 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 USP17L13C9JLJ4 530 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 USP17L11C9JVI0 530 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 USP17L18D6R9N7 530 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 USP17L22D6RA61 530 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 USP17L17D6RBQ6 530 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 USP17L19D6RCP7 530 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 USP17L20D6RJB6 530 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 USP17L24Q0WX57 530 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 SEPT2Q15019 361 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 ZSCAN25Q6NSZ9 544 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 PAGR1Q9BTK6 254 aa28.31■■■□□ 2.12
TTC3-217ENST00000481605 ERVK-9P63128 1117 aa28.3■■■□□ 2.12
TTC3-217ENST00000481605 ERVK-24P63145 666 aa28.3■■■□□ 2.12
TTC3-217ENST00000481605 Q3C1V9 767 aa28.3■■■□□ 2.12
TTC3-217ENST00000481605 SLC44A5Q8NCS7 719 aa28.3■■■□□ 2.12
TTC3-217ENST00000481605 SGPL1O95470 568 aa28.29■■■□□ 2.12
TTC3-217ENST00000481605 VCAM1P19320 739 aa28.29■■■□□ 2.12
TTC3-217ENST00000481605 POTEEQ6S8J3 1075 aa28.29■■■□□ 2.12
TTC3-217ENST00000481605 DYNLL2Q96FJ2 89 aa28.29■■■□□ 2.12
TTC3-217ENST00000481605 SWAP70Q9UH65 585 aa28.29■■■□□ 2.12
TTC3-217ENST00000481605 CATSPERGQ6ZRH7 1159 aa28.28■■■□□ 2.12
TTC3-217ENST00000481605 GCC1Q96CN9 775 aa28.28■■■□□ 2.12
TTC3-217ENST00000481605 GPATCH3Q96I76 525 aa28.28■■■□□ 2.12
TTC3-217ENST00000481605 MAPK4P31152 587 aa28.28■■■□□ 2.12
TTC3-217ENST00000481605 CCAR1Q8IX12 1150 aaKnown RBP28.28■■■□□ 2.12
TTC3-217ENST00000481605 DEFB118Q96PH6 123 aa28.28■■■□□ 2.12
TTC3-217ENST00000481605 PUS7LQ9H0K6 701 aaKnown RBP28.28■■■□□ 2.12
TTC3-217ENST00000481605 MYH7P12883 1935 aa28.27■■■□□ 2.12
TTC3-217ENST00000481605 HMGCRP04035 888 aa28.27■■■□□ 2.12
TTC3-217ENST00000481605 TSHZ3Q63HK5 1081 aa28.27■■■□□ 2.12
TTC3-217ENST00000481605 UBE2Q1Q7Z7E8 422 aa28.27■■■□□ 2.12
TTC3-217ENST00000481605 PORCNQ9H237 461 aa28.27■■■□□ 2.12
TTC3-217ENST00000481605 PAK6Q9NQU5 681 aaPredicted RBP28.27■■■□□ 2.12
TTC3-217ENST00000481605 PCDHB15Q9Y5E8 787 aa28.27■■■□□ 2.12
TTC3-217ENST00000481605 SLC4A4Q9Y6R1 1079 aa28.27■■■□□ 2.12
TTC3-217ENST00000481605 USP17L12C9JPN9 530 aa28.26■■■□□ 2.11
TTC3-217ENST00000481605 USP17L21D6R901 530 aa28.26■■■□□ 2.11
TTC3-217ENST00000481605 CYP2B6P20813 491 aa28.26■■■□□ 2.11
TTC3-217ENST00000481605 C12orf60Q5U649 245 aa28.26■■■□□ 2.11
TTC3-217ENST00000481605 TMEM179Q6ZVK1 233 aa28.26■■■□□ 2.11
TTC3-217ENST00000481605 AMOTL1Q8IY63 956 aa28.26■■■□□ 2.11
TTC3-217ENST00000481605 DDRGK1Q96HY6 314 aa28.26■■■□□ 2.11
TTC3-217ENST00000481605 NUDT12Q9BQG2 462 aa28.26■■■□□ 2.11
TTC3-217ENST00000481605 RPAP3Q9H6T3 665 aaPredicted RBP28.26■■■□□ 2.11
TTC3-217ENST00000481605 RABGAP1Q9Y3P9 1069 aa28.26■■■□□ 2.11
TTC3-217ENST00000481605 PLXNB2O15031 1838 aa28.25■■■□□ 2.11
TTC3-217ENST00000481605 CYP2D7A0A087X1C5 515 aa28.25■■■□□ 2.11
TTC3-217ENST00000481605 A0A1W2PRG0 241 aa28.25■■■□□ 2.11
TTC3-217ENST00000481605 SOCS4Q8WXH5 440 aa28.25■■■□□ 2.11
TTC3-217ENST00000481605 BAZ2AQ9UIF9 1905 aaKnown RBP28.25■■■□□ 2.11
TTC3-217ENST00000481605 SMIM22K7EJ46 135 aa28.24■■■□□ 2.11
TTC3-217ENST00000481605 TFRCP02786 760 aaKnown RBP28.24■■■□□ 2.11
TTC3-217ENST00000481605 GPR142Q7Z601 462 aa28.24■■■□□ 2.11
TTC3-217ENST00000481605 KBTBD3Q8NAB2 608 aa28.24■■■□□ 2.11
TTC3-217ENST00000481605 CNMDO75829 334 aa28.23■■■□□ 2.11
TTC3-217ENST00000481605 FARP2O94887 1054 aaPredicted RBP28.23■■■□□ 2.11
TTC3-217ENST00000481605 RRP1P56182 461 aaKnown RBP28.23■■■□□ 2.11
TTC3-217ENST00000481605 TRIM32Q13049 653 aa28.23■■■□□ 2.11
TTC3-217ENST00000481605 TRIB2Q92519 343 aa28.23■■■□□ 2.11
TTC3-217ENST00000481605 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.23■■■□□ 2.112e-10■□□□□ 9.5
TTC3-217ENST00000481605 AKR1B1P15121 316 aa28.23■■■□□ 2.11
TTC3-217ENST00000481605 CDK8P49336 464 aa28.23■■■□□ 2.11
TTC3-217ENST00000481605 DPF3Q92784 378 aa28.23■■■□□ 2.11
TTC3-217ENST00000481605 LBX2Q6XYB7 198 aa28.22■■■□□ 2.11
TTC3-217ENST00000481605 PLEKHH3Q7Z736 793 aa28.22■■■□□ 2.11
TTC3-217ENST00000481605 CWC22Q9HCG8 908 aaKnown RBP28.22■■■□□ 2.11
TTC3-217ENST00000481605 SPDYE16A6NNV3 312 aaPredicted RBP28.21■■■□□ 2.11
TTC3-217ENST00000481605 XRCC5P13010 732 aaKnown RBP28.21■■■□□ 2.11
TTC3-217ENST00000481605 CAPN2P17655 700 aa28.21■■■□□ 2.11
TTC3-217ENST00000481605 CCNA1P78396 465 aa28.21■■■□□ 2.11
TTC3-217ENST00000481605 CTR9Q6PD62 1173 aa28.21■■■□□ 2.11
TTC3-217ENST00000481605 C16orf86Q6ZW13 317 aa28.21■■■□□ 2.11
TTC3-217ENST00000481605 CCDC17Q96LX7 622 aa28.21■■■□□ 2.11
TTC3-217ENST00000481605 STRBPQ96SI9 672 aaKnown RBP28.21■■■□□ 2.11
TTC3-217ENST00000481605 HTATIP2Q9BUP3 242 aa28.21■■■□□ 2.11
TTC3-217ENST00000481605 CRISPLD2Q9H0B8 497 aa28.21■■■□□ 2.11
TTC3-217ENST00000481605 HMX1Q9NP08 348 aaPredicted RBP28.21■■■□□ 2.11
TTC3-217ENST00000481605 RPTORQ8N122 1335 aa28.21■■■□□ 2.11
TTC3-217ENST00000481605 MORN1Q5T089 497 aa28.2■■■□□ 2.1
TTC3-217ENST00000481605 CLEC10AQ8IUN9 316 aa28.2■■■□□ 2.1
TTC3-217ENST00000481605 USP6NLQ92738 828 aa28.2■■■□□ 2.1
TTC3-217ENST00000481605 BTBD7Q9P203 1132 aa28.2■■■□□ 2.1
TTC3-217ENST00000481605 H0YGN5 161 aa28.19■■■□□ 2.1
TTC3-217ENST00000481605 ICA1Q05084 483 aa28.19■■■□□ 2.1
TTC3-217ENST00000481605 SIAH1Q8IUQ4 282 aa28.19■■■□□ 2.1
TTC3-217ENST00000481605 APPBP2Q92624 585 aa28.19■■■□□ 2.1
TTC3-217ENST00000481605 OSBP2Q969R2 916 aa28.19■■■□□ 2.1
TTC3-217ENST00000481605 ARHGEF10LQ9HCE6 1279 aa28.19■■■□□ 2.1
TTC3-217ENST00000481605 MYH8P13535 1937 aa28.19■■■□□ 2.1
TTC3-217ENST00000481605 RGS2P41220 211 aa28.18■■■□□ 2.1
TTC3-217ENST00000481605 KIAA1755Q5JYT7 1200 aa28.18■■■□□ 2.1
TTC3-217ENST00000481605 TANGO6Q9C0B7 1094 aa28.18■■■□□ 2.1
TTC3-217ENST00000481605 ARPP21Q9UBL0 812 aaPredicted RBP28.18■■■□□ 2.1
TTC3-217ENST00000481605 RNF113AO15541 343 aaKnown RBP28.18■■■□□ 2.1
TTC3-217ENST00000481605 COG2Q14746 738 aa28.18■■■□□ 2.1
TTC3-217ENST00000481605 HABP4Q5JVS0 413 aaKnown RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms