RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 CYFIP1Q7L576 1253 aa6.03□□□□□ -1.44
CBX3-207ENST00000481300 PI4K2BQ8TCG2 481 aa6.03□□□□□ -1.44
CBX3-207ENST00000481300 PLPPR2Q96GM1 343 aa6.03□□□□□ -1.44
CBX3-207ENST00000481300 FBRSQ9HAH7 460 aa6.03□□□□□ -1.44
CBX3-207ENST00000481300 PRDM7Q9NQW5 492 aa6.03□□□□□ -1.44
CBX3-207ENST00000481300 GTF2IRD1Q9UHL9 959 aa6.03□□□□□ -1.44
CBX3-207ENST00000481300 SNX11Q9Y5W9 270 aa6.03□□□□□ -1.44
CBX3-207ENST00000481300 SNCAIPQ9Y6H5 919 aa6.03□□□□□ -1.44
CBX3-207ENST00000481300 PRAMEF27A3QJZ7 478 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 SLITRK5O94991 958 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 C8AP07357 584 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 DNAJA1P31689 397 aaKnown RBP6.02□□□□□ -1.45
CBX3-207ENST00000481300 MCM4P33991 863 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 CRKP46108 304 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 CDK8P49336 464 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 ARID5AQ03989 594 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 CDC37L1Q7L3B6 337 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 REC114Q7Z4M0 266 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 SLC43A3Q8NBI5 491 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 FBXO27Q8NI29 283 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 RASGRP4Q8TDF6 673 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 LRRC3Q9BY71 257 aa6.02□□□□□ -1.45
CBX3-207ENST00000481300 CNTNAP4Q9C0A0 1308 aa6.01□□□□□ -1.45
CBX3-207ENST00000481300 LRIG2O94898 1065 aa6.01□□□□□ -1.45
CBX3-207ENST00000481300 ZNF165P49910 485 aa6.01□□□□□ -1.45
CBX3-207ENST00000481300 COL9A2Q14055 689 aaPredicted RBP6.01□□□□□ -1.45
CBX3-207ENST00000481300 SLBPQ14493 270 aaKnown RBP eCLIP6.01□□□□□ -1.45
CBX3-207ENST00000481300 SF3A1Q15459 793 aaKnown RBP6.01□□□□□ -1.45
CBX3-207ENST00000481300 NKG7Q16617 165 aa6.01□□□□□ -1.45
CBX3-207ENST00000481300 SLC23A3Q6PIS1 610 aa6.01□□□□□ -1.45
CBX3-207ENST00000481300 KCT2Q8NC54 265 aa6.01□□□□□ -1.45
CBX3-207ENST00000481300 ZNF507Q8TCN5 953 aa6.01□□□□□ -1.45
CBX3-207ENST00000481300 ASB11Q8WXH4 323 aa6.01□□□□□ -1.45
CBX3-207ENST00000481300 JAG1P78504 1218 aa6□□□□□ -1.45
CBX3-207ENST00000481300 PDE4BQ07343 736 aa6□□□□□ -1.45
CBX3-207ENST00000481300 FZD5Q13467 585 aa6□□□□□ -1.45
CBX3-207ENST00000481300 SLITRK4Q8IW52 837 aa6□□□□□ -1.45
CBX3-207ENST00000481300 FAM168AQ92567 244 aa6□□□□□ -1.45
CBX3-207ENST00000481300 SEC16BQ96JE7 1060 aa6□□□□□ -1.45
CBX3-207ENST00000481300 BUD13Q9BRD0 619 aaKnown RBP eCLIP6□□□□□ -1.45
CBX3-207ENST00000481300 TANGO6Q9C0B7 1094 aa6□□□□□ -1.45
CBX3-207ENST00000481300 WNT10AQ9GZT5 417 aa6□□□□□ -1.45
CBX3-207ENST00000481300 PRDM5Q9NQX1 630 aaPredicted RBP6□□□□□ -1.45
CBX3-207ENST00000481300 MAPK8IP1Q9UQF2 711 aa6□□□□□ -1.45
CBX3-207ENST00000481300 EFR3BQ9Y2G0 817 aa6□□□□□ -1.45
CBX3-207ENST00000481300 PITPNM2Q9BZ72 1349 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 GNAT3A8MTJ3 354 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 PRR33A8MZF0 331 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 RBAK-RBAKDNI3L0D1 243 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 GRIN3BO60391 1043 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 ATF4P18848 351 aaPredicted RBP5.99□□□□□ -1.45
CBX3-207ENST00000481300 NASPP49321 788 aaPredicted RBP5.99□□□□□ -1.45
CBX3-207ENST00000481300 CLCN7P51798 805 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 ETF1P62495 437 aaKnown RBP5.99□□□□□ -1.45
CBX3-207ENST00000481300 ZP2Q05996 745 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 IKZF1Q13422 519 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 MLECQ14165 292 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 ZNF648Q5T619 568 aaPredicted RBP5.99□□□□□ -1.45
CBX3-207ENST00000481300 GK5Q6ZS86 529 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 CPLX3Q8WVH0 158 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 SREK1Q8WXA9 508 aaKnown RBP5.99□□□□□ -1.45
CBX3-207ENST00000481300 FERD3LQ96RJ6 166 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 BRMS1Q9HCU9 246 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 GINM1Q9NU53 330 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 TACC3Q9Y6A5 838 aa5.99□□□□□ -1.45
CBX3-207ENST00000481300 GFRA2O00451 464 aa5.98□□□□□ -1.45
CBX3-207ENST00000481300 SSBP05455 408 aaKnown RBP eCLIP5.98□□□□□ -1.45
CBX3-207ENST00000481300 CAP2P40123 477 aa5.98□□□□□ -1.45
CBX3-207ENST00000481300 FBXW10Q5XX13 1052 aa5.98□□□□□ -1.45
CBX3-207ENST00000481300 REXO1Q8N1G1 1221 aaKnown RBP5.98□□□□□ -1.45
CBX3-207ENST00000481300 FLAD1Q8NFF5 587 aa5.98□□□□□ -1.45
CBX3-207ENST00000481300 RIN3Q8TB24 985 aa5.98□□□□□ -1.45
CBX3-207ENST00000481300 MIPEPQ99797 713 aa5.98□□□□□ -1.45
CBX3-207ENST00000481300 FOXQ1Q9C009 403 aa5.98□□□□□ -1.45
CBX3-207ENST00000481300 USP35Q9P2H5 1018 aa5.98□□□□□ -1.45
CBX3-207ENST00000481300 PPP1R1BQ9UD71 204 aaPredicted RBP5.98□□□□□ -1.45
CBX3-207ENST00000481300 PCDHB14Q9Y5E9 798 aa5.98□□□□□ -1.45
CBX3-207ENST00000481300 ARID1BQ8NFD5 2236 aaPredicted RBP5.98□□□□□ -1.45
CBX3-207ENST00000481300 PGRP06401 933 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 PLCG1P19174 1290 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 ATP2B1P20020 1258 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 GRK4P32298 578 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 SOX9P48436 509 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 C22orf34Q6ZV56 151 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 TMEM40Q8WWA1 233 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 DRC1Q96MC2 740 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 HSPA12BQ96MM6 686 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 CRBNQ96SW2 442 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 GMLQ99445 158 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 SEMA3GQ9NS98 782 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 STRIP2Q9ULQ0 834 aa5.97□□□□□ -1.45
CBX3-207ENST00000481300 HTR3BO95264 441 aa5.96□□□□□ -1.46
CBX3-207ENST00000481300 ZNF865P0CJ78 1059 aaPredicted RBP5.96□□□□□ -1.46
CBX3-207ENST00000481300 IMPDH2P12268 514 aa5.96□□□□□ -1.46
CBX3-207ENST00000481300 PRAMEF13Q5VWM6 474 aa5.96□□□□□ -1.46
CBX3-207ENST00000481300 HID1Q8IV36 788 aa5.96□□□□□ -1.46
CBX3-207ENST00000481300 MFSD2AQ8NA29 543 aa5.96□□□□□ -1.46
CBX3-207ENST00000481300 ATP13A1Q9HD20 1204 aa5.96□□□□□ -1.46
CBX3-207ENST00000481300 TPX2Q9ULW0 747 aaKnown RBP5.96□□□□□ -1.46
CBX3-207ENST00000481300 PPT2Q9UMR5 302 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms