RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 SIAH1Q8IUQ4 282 aa24.18■■□□□ 1.46
CTSA-206ENST00000480961 TBC1D2Q9BYX2 928 aa24.18■■□□□ 1.46
CTSA-206ENST00000480961 ZNF287Q9HBT7 754 aa24.18■■□□□ 1.46
CTSA-206ENST00000480961 SAGE1Q9NXZ1 904 aa24.18■■□□□ 1.46
CTSA-206ENST00000480961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.18■■□□□ 1.46
CTSA-206ENST00000480961 ZMYM6O95789 1325 aa24.17■■□□□ 1.46
CTSA-206ENST00000480961 A0A1W2PRG0 241 aa24.17■■□□□ 1.46
CTSA-206ENST00000480961 PDHXO00330 501 aa24.17■■□□□ 1.46
CTSA-206ENST00000480961 ZNF213O14771 459 aa24.17■■□□□ 1.46
CTSA-206ENST00000480961 RRP12Q5JTH9 1297 aaKnown RBP24.17■■□□□ 1.46
CTSA-206ENST00000480961 TBC1D10CQ8IV04 446 aa24.17■■□□□ 1.46
CTSA-206ENST00000480961 FEZ1Q99689 392 aa24.17■■□□□ 1.46
CTSA-206ENST00000480961 TOMM22Q9NS69 142 aa24.17■■□□□ 1.46
CTSA-206ENST00000480961 ALDH1A1P00352 501 aa24.16■■□□□ 1.46
CTSA-206ENST00000480961 TFAP4Q01664 338 aa24.16■■□□□ 1.46
CTSA-206ENST00000480961 ICA1Q05084 483 aa24.16■■□□□ 1.46
CTSA-206ENST00000480961 CRHR2Q13324 411 aa24.16■■□□□ 1.46
CTSA-206ENST00000480961 ANKRD23Q86SG2 305 aa24.16■■□□□ 1.46
CTSA-206ENST00000480961 EMILIN3Q9NT22 766 aa24.16■■□□□ 1.46
CTSA-206ENST00000480961 TAF1CQ15572 869 aaPredicted RBP24.15■■□□□ 1.46
CTSA-206ENST00000480961 NKX2-3Q8TAU0 364 aa24.15■■□□□ 1.46
CTSA-206ENST00000480961 TMOD4Q9NZQ9 345 aa24.15■■□□□ 1.46
CTSA-206ENST00000480961 CTNNA3Q9UI47 895 aa24.15■■□□□ 1.46
CTSA-206ENST00000480961 RANBP6O60518 1105 aaKnown RBP24.14■■□□□ 1.45
CTSA-206ENST00000480961 TSPY3P0CV98 308 aa24.14■■□□□ 1.45
CTSA-206ENST00000480961 TSPY8P0CW00 308 aa24.14■■□□□ 1.45
CTSA-206ENST00000480961 EEF2P13639 858 aaKnown RBP24.14■■□□□ 1.45
CTSA-206ENST00000480961 SH3D19Q5HYK7 790 aa24.14■■□□□ 1.45
CTSA-206ENST00000480961 USP17L2Q6R6M4 530 aa24.14■■□□□ 1.45
CTSA-206ENST00000480961 KIAA1211Q6ZU35 1233 aa24.14■■□□□ 1.45
CTSA-206ENST00000480961 C19orf81C9J6K1 198 aa24.13■■□□□ 1.45
CTSA-206ENST00000480961 CYP2C8P10632 490 aa24.13■■□□□ 1.45
CTSA-206ENST00000480961 IMMTQ16891 758 aaKnown RBP24.13■■□□□ 1.45
CTSA-206ENST00000480961 AKNAD1Q5T1N1 836 aa24.13■■□□□ 1.45
CTSA-206ENST00000480961 CASC1Q6TDU7 716 aa24.13■■□□□ 1.45
CTSA-206ENST00000480961 LSG1Q9H089 658 aaKnown RBP24.13■■□□□ 1.45
CTSA-206ENST00000480961 KANSL2Q9H9L4 492 aa24.13■■□□□ 1.45
CTSA-206ENST00000480961 ANO2Q9NQ90 1003 aa24.13■■□□□ 1.45
CTSA-206ENST00000480961 AGTPBP1Q9UPW5 1226 aa24.13■■□□□ 1.45
CTSA-206ENST00000480961 ORC4O43929 436 aa24.12■■□□□ 1.45
CTSA-206ENST00000480961 FGRP09769 529 aa24.12■■□□□ 1.45
CTSA-206ENST00000480961 MFSD6Q6ZSS7 791 aa24.12■■□□□ 1.45
CTSA-206ENST00000480961 PROCA1Q8NCQ7 364 aaPredicted RBP24.12■■□□□ 1.45
CTSA-206ENST00000480961 NEDD1Q8NHV4 660 aa24.12■■□□□ 1.45
CTSA-206ENST00000480961 MAP4K1Q92918 833 aa24.12■■□□□ 1.45
CTSA-206ENST00000480961 KIAA1683Q9H0B3 1180 aa24.12■■□□□ 1.45
CTSA-206ENST00000480961 ZFYVE28Q9HCC9 887 aa24.12■■□□□ 1.45
CTSA-206ENST00000480961 U3KPZ7 1027 aaPredicted RBP24.12■■□□□ 1.45
CTSA-206ENST00000480961 IGKV6D-41A0A0C4DH26 115 aa24.11■■□□□ 1.45
CTSA-206ENST00000480961 TSPY2A6NKD2 308 aa24.11■■□□□ 1.45
CTSA-206ENST00000480961 NMT2O60551 498 aa24.11■■□□□ 1.45
CTSA-206ENST00000480961 KIAA1755Q5JYT7 1200 aa24.11■■□□□ 1.45
CTSA-206ENST00000480961 STAG1Q8WVM7 1258 aa24.11■■□□□ 1.45
CTSA-206ENST00000480961 CEP95Q96GE4 821 aa24.11■■□□□ 1.45
CTSA-206ENST00000480961 ARHGEF10LQ9HCE6 1279 aa24.11■■□□□ 1.45
CTSA-206ENST00000480961 CLIP2Q9UDT6 1046 aa24.11■■□□□ 1.45
CTSA-206ENST00000480961 RBM8AQ9Y5S9 174 aaKnown RBP24.11■■□□□ 1.45
CTSA-206ENST00000480961 TAF6LQ9Y6J9 622 aa24.11■■□□□ 1.45
CTSA-206ENST00000480961 ATAD5Q96QE3 1844 aa24.11■■□□□ 1.45
CTSA-206ENST00000480961 NEDD4P46934 1319 aa24.1■■□□□ 1.45
CTSA-206ENST00000480961 PHIPQ8WWQ0 1821 aa24.1■■□□□ 1.45
CTSA-206ENST00000480961 GPR25O00155 361 aa24.09■■□□□ 1.45
CTSA-206ENST00000480961 RAD21O60216 631 aa24.09■■□□□ 1.45
CTSA-206ENST00000480961 USP14P54578 494 aa24.09■■□□□ 1.45
CTSA-206ENST00000480961 SPICE1Q8N0Z3 855 aa24.09■■□□□ 1.45
CTSA-206ENST00000480961 CFHR5Q9BXR6 569 aa24.09■■□□□ 1.45
CTSA-206ENST00000480961 RNF41Q9H4P4 317 aaPredicted RBP24.09■■□□□ 1.45
CTSA-206ENST00000480961 ZCCHC17Q9NP64 241 aaKnown RBP24.09■■□□□ 1.45
CTSA-206ENST00000480961 MTMR4Q9NYA4 1195 aa24.09■■□□□ 1.45
CTSA-206ENST00000480961 CPA4Q9UI42 421 aa24.09■■□□□ 1.45
CTSA-206ENST00000480961 TMX2Q9Y320 296 aa24.09■■□□□ 1.45
CTSA-206ENST00000480961 LAMB1P07942 1786 aa24.08■■□□□ 1.45
CTSA-206ENST00000480961 CYP21A2P08686 494 aa24.08■■□□□ 1.45
CTSA-206ENST00000480961 IL17RBQ9NRM6 502 aa24.08■■□□□ 1.45
CTSA-206ENST00000480961 ECM2O94769 699 aaPredicted RBP24.07■■□□□ 1.44
CTSA-206ENST00000480961 VCAM1P19320 739 aa24.07■■□□□ 1.44
CTSA-206ENST00000480961 ZNF296Q8WUU4 475 aaPredicted RBP24.07■■□□□ 1.44
CTSA-206ENST00000480961 CHMP4CQ96CF2 233 aa24.07■■□□□ 1.44
CTSA-206ENST00000480961 C12orf42Q96LP6 360 aa24.07■■□□□ 1.44
CTSA-206ENST00000480961 PARK7Q99497 189 aaKnown RBP24.07■■□□□ 1.44
CTSA-206ENST00000480961 ASCC2Q9H1I8 757 aaPredicted RBP24.07■■□□□ 1.44
CTSA-206ENST00000480961 NYAP2Q9P242 653 aa24.07■■□□□ 1.44
CTSA-206ENST00000480961 SLC45A1Q9Y2W3 748 aa24.07■■□□□ 1.44
CTSA-206ENST00000480961 B4E1Z4 1266 aa24.06■■□□□ 1.44
CTSA-206ENST00000480961 TLR2O60603 784 aa24.06■■□□□ 1.44
CTSA-206ENST00000480961 OSBPP22059 807 aa24.06■■□□□ 1.44
CTSA-206ENST00000480961 PABPC4Q13310 644 aaKnown RBP eCLIP24.06■■□□□ 1.44
CTSA-206ENST00000480961 LRRC47Q8N1G4 583 aaKnown RBP24.06■■□□□ 1.44
CTSA-206ENST00000480961 ZKSCAN3Q9BRR0 538 aa24.06■■□□□ 1.44
CTSA-206ENST00000480961 RPAP3Q9H6T3 665 aaPredicted RBP24.06■■□□□ 1.44
CTSA-206ENST00000480961 SH2D4AQ9H788 454 aa24.06■■□□□ 1.44
CTSA-206ENST00000480961 VCPKMTQ9H867 229 aa24.06■■□□□ 1.44
CTSA-206ENST00000480961 GTF3C3Q9Y5Q9 886 aa24.06■■□□□ 1.44
CTSA-206ENST00000480961 KDM4AO75164 1064 aa24.05■■□□□ 1.44
CTSA-206ENST00000480961 TTLL1O95922 423 aa24.05■■□□□ 1.44
CTSA-206ENST00000480961 PCP11498 1178 aaKnown RBP24.05■■□□□ 1.44
CTSA-206ENST00000480961 SMCR8Q8TEV9 937 aaPredicted RBP24.05■■□□□ 1.44
CTSA-206ENST00000480961 ESR2Q92731 530 aa24.05■■□□□ 1.44
CTSA-206ENST00000480961 P2RX7Q99572 595 aaKnown RBP24.05■■□□□ 1.44
CTSA-206ENST00000480961 STX8Q9UNK0 236 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms