RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 TMEM40Q8WWA1 233 aa8.53□□□□□ -1.04
CALD1-219ENST00000480638 CCDC74BQ96LY2 380 aa8.53□□□□□ -1.04
CALD1-219ENST00000480638 FERD3LQ96RJ6 166 aa8.53□□□□□ -1.04
CALD1-219ENST00000480638 ANTXR1Q9H6X2 564 aa8.53□□□□□ -1.04
CALD1-219ENST00000480638 BSDC1Q9NW68 430 aaPredicted RBP8.53□□□□□ -1.04
CALD1-219ENST00000480638 PPT2Q9UMR5 302 aa8.53□□□□□ -1.04
CALD1-219ENST00000480638 PLAGL2Q9UPG8 496 aa8.53□□□□□ -1.04
CALD1-219ENST00000480638 CEP131Q9UPN4 1083 aa8.53□□□□□ -1.04
CALD1-219ENST00000480638 EFR3BQ9Y2G0 817 aa8.53□□□□□ -1.04
CALD1-219ENST00000480638 GNAT3A8MTJ3 354 aa8.52□□□□□ -1.05
CALD1-219ENST00000480638 PRR33A8MZF0 331 aa8.52□□□□□ -1.05
CALD1-219ENST00000480638 PRNPP04156 253 aa8.52□□□□□ -1.05
CALD1-219ENST00000480638 ZNF865P0CJ78 1059 aaPredicted RBP8.52□□□□□ -1.05
CALD1-219ENST00000480638 CYP7A1P22680 504 aa8.52□□□□□ -1.05
CALD1-219ENST00000480638 SOX9P48436 509 aa8.52□□□□□ -1.05
CALD1-219ENST00000480638 IFI16Q16666 785 aaKnown RBP8.52□□□□□ -1.05
CALD1-219ENST00000480638 LRRFIP1Q32MZ4 808 aaKnown RBP8.52□□□□□ -1.05
CALD1-219ENST00000480638 CDCP2Q5VXM1 449 aa8.52□□□□□ -1.05
CALD1-219ENST00000480638 BAHD1Q8TBE0 780 aaPredicted RBP8.52□□□□□ -1.05
CALD1-219ENST00000480638 ATG4CQ96DT6 458 aa8.52□□□□□ -1.05
CALD1-219ENST00000480638 COX4I2Q96KJ9 171 aa8.52□□□□□ -1.05
CALD1-219ENST00000480638 KIF2CQ99661 725 aa8.52□□□□□ -1.05
CALD1-219ENST00000480638 CNNM2Q9H8M5 875 aa8.52□□□□□ -1.05
CALD1-219ENST00000480638 RBAK-RBAKDNI3L0D1 243 aa8.51□□□□□ -1.05
CALD1-219ENST00000480638 IMPDH2P12268 514 aa8.51□□□□□ -1.05
CALD1-219ENST00000480638 RAG1P15918 1043 aa8.51□□□□□ -1.05
CALD1-219ENST00000480638 NLRC3Q7RTR2 1065 aa8.51□□□□□ -1.05
CALD1-219ENST00000480638 SPACA3Q8IXA5 215 aa8.51□□□□□ -1.05
CALD1-219ENST00000480638 MFSD4AQ8N468 514 aa8.51□□□□□ -1.05
CALD1-219ENST00000480638 TNKS2Q9H2K2 1166 aa8.51□□□□□ -1.05
CALD1-219ENST00000480638 CCDC39Q9UFE4 941 aa8.51□□□□□ -1.05
CALD1-219ENST00000480638 RGS13O14921 159 aa8.5□□□□□ -1.05
CALD1-219ENST00000480638 ADAMTS4O75173 837 aa8.5□□□□□ -1.05
CALD1-219ENST00000480638 KIR3DL1P43629 444 aa8.5□□□□□ -1.05
CALD1-219ENST00000480638 NKPD1Q17RQ9 610 aa8.5□□□□□ -1.05
CALD1-219ENST00000480638 CCDC81Q6ZN84 652 aa8.5□□□□□ -1.05
CALD1-219ENST00000480638 VSIG10LQ86VR7 867 aa8.5□□□□□ -1.05
CALD1-219ENST00000480638 CAPN6Q9Y6Q1 641 aa8.5□□□□□ -1.05
CALD1-219ENST00000480638 UBOX5O94941 541 aa8.49□□□□□ -1.05
CALD1-219ENST00000480638 CBX7O95931 251 aa8.49□□□□□ -1.05
CALD1-219ENST00000480638 NME1P15531 152 aaKnown RBP8.49□□□□□ -1.05
CALD1-219ENST00000480638 POLR2BP30876 1174 aaKnown RBP8.49□□□□□ -1.05
CALD1-219ENST00000480638 GBP1P32455 592 aa8.49□□□□□ -1.05
CALD1-219ENST00000480638 FBXW10Q5XX13 1052 aa8.49□□□□□ -1.05
CALD1-219ENST00000480638 TINF2Q9BSI4 451 aa8.49□□□□□ -1.05
CALD1-219ENST00000480638 CAPN10Q9HC96 672 aa8.49□□□□□ -1.05
CALD1-219ENST00000480638 ANGEL1Q9UNK9 670 aaKnown RBP8.49□□□□□ -1.05
CALD1-219ENST00000480638 COL17A1Q9UMD9 1497 aaPredicted RBP8.49□□□□□ -1.05
CALD1-219ENST00000480638 TMEM265A0A087WTH1 108 aa8.48□□□□□ -1.05
CALD1-219ENST00000480638 TNFRSF10CO14798 259 aa8.48□□□□□ -1.05
CALD1-219ENST00000480638 NASPP49321 788 aaPredicted RBP8.48□□□□□ -1.05
CALD1-219ENST00000480638 NFXL1Q6ZNB6 911 aa8.48□□□□□ -1.05
CALD1-219ENST00000480638 RBBP8NLQ8NC74 664 aaPredicted RBP8.48□□□□□ -1.05
CALD1-219ENST00000480638 RNF141Q8WVD5 230 aa8.48□□□□□ -1.05
CALD1-219ENST00000480638 MISP3Q96FF7 219 aa8.48□□□□□ -1.05
CALD1-219ENST00000480638 SEC16BQ96JE7 1060 aa8.48□□□□□ -1.05
CALD1-219ENST00000480638 HRASLS5Q96KN8 279 aa8.48□□□□□ -1.05
CALD1-219ENST00000480638 Q96M66 194 aa8.48□□□□□ -1.05
CALD1-219ENST00000480638 KREMEN1Q96MU8 473 aa8.48□□□□□ -1.05
CALD1-219ENST00000480638 FAM155AB1AL88 458 aaPredicted RBP8.47□□□□□ -1.05
CALD1-219ENST00000480638 CLCN7P51798 805 aa8.47□□□□□ -1.05
CALD1-219ENST00000480638 PRKCQQ04759 706 aa8.47□□□□□ -1.05
CALD1-219ENST00000480638 LSRQ86X29 649 aaPredicted RBP8.47□□□□□ -1.05
CALD1-219ENST00000480638 WFDC3Q8IUB2 231 aa8.47□□□□□ -1.05
CALD1-219ENST00000480638 STK11IPQ8N1F8 1099 aa8.47□□□□□ -1.05
CALD1-219ENST00000480638 BCL7CQ8WUZ0 217 aaPredicted RBP8.47□□□□□ -1.05
CALD1-219ENST00000480638 SNX11Q9Y5W9 270 aa8.47□□□□□ -1.05
CALD1-219ENST00000480638 WNT11O96014 354 aa8.46□□□□□ -1.06
CALD1-219ENST00000480638 ATF4P18848 351 aaPredicted RBP8.46□□□□□ -1.06
CALD1-219ENST00000480638 CCNFP41002 786 aa8.46□□□□□ -1.06
CALD1-219ENST00000480638 TNK2Q07912 1038 aa8.46□□□□□ -1.06
CALD1-219ENST00000480638 TAB3Q8N5C8 712 aaPredicted RBP8.46□□□□□ -1.06
CALD1-219ENST00000480638 TM9SF2Q99805 663 aa8.46□□□□□ -1.06
CALD1-219ENST00000480638 ASPNQ9BXN1 380 aa8.46□□□□□ -1.06
CALD1-219ENST00000480638 SRRTQ9BXP5 876 aaKnown RBP8.46□□□□□ -1.06
CALD1-219ENST00000480638 VAV3Q9UKW4 847 aa8.46□□□□□ -1.06
CALD1-219ENST00000480638 SLC5A6Q9Y289 635 aa8.46□□□□□ -1.06
CALD1-219ENST00000480638 ST14Q9Y5Y6 855 aa8.46□□□□□ -1.06
CALD1-219ENST00000480638 ACRP10323 421 aa8.45□□□□□ -1.06
CALD1-219ENST00000480638 BNIP3Q12983 259 aa8.45□□□□□ -1.06
CALD1-219ENST00000480638 AOC3Q16853 763 aa8.45□□□□□ -1.06
CALD1-219ENST00000480638 ZNF574Q6ZN55 896 aaPredicted RBP8.45□□□□□ -1.06
CALD1-219ENST00000480638 FLCNQ8NFG4 579 aa8.45□□□□□ -1.06
CALD1-219ENST00000480638 VWCEQ96DN2 955 aa8.45□□□□□ -1.06
CALD1-219ENST00000480638 SLC9A7Q96T83 725 aa8.45□□□□□ -1.06
CALD1-219ENST00000480638 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.45□□□□□ -1.06
CALD1-219ENST00000480638 PITPNM2Q9BZ72 1349 aa8.45□□□□□ -1.06
CALD1-219ENST00000480638 EIF6P56537 245 aaKnown RBP8.44□□□□□ -1.06
CALD1-219ENST00000480638 CHMP4BP1P59074 171 aa8.44□□□□□ -1.06
CALD1-219ENST00000480638 GNL2Q13823 731 aaKnown RBP8.44□□□□□ -1.06
CALD1-219ENST00000480638 CDKAL1Q5VV42 579 aa8.44□□□□□ -1.06
CALD1-219ENST00000480638 NBPF11Q86T75 865 aa8.44□□□□□ -1.06
CALD1-219ENST00000480638 DTWD2Q8NBA8 298 aa8.44□□□□□ -1.06
CALD1-219ENST00000480638 PIWIL2Q8TC59 973 aaKnown RBP8.44□□□□□ -1.06
CALD1-219ENST00000480638 FBXL18Q96ME1 805 aa8.44□□□□□ -1.06
CALD1-219ENST00000480638 HSPA12BQ96MM6 686 aa8.44□□□□□ -1.06
CALD1-219ENST00000480638 CRBNQ96SW2 442 aa8.44□□□□□ -1.06
CALD1-219ENST00000480638 LOC100996750A0A140TA64 210 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 H3BS24 57 aa8.43□□□□□ -1.06
CALD1-219ENST00000480638 GUCY2CP25092 1073 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms