RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 ZNF280CQ8ND82 737 aa12.72□□□□□ -0.37
SMURF1-204ENST00000480055 UBE2OQ9C0C9 1292 aaKnown RBP12.72□□□□□ -0.37
SMURF1-204ENST00000480055 ASCC2Q9H1I8 757 aaPredicted RBP12.72□□□□□ -0.37
SMURF1-204ENST00000480055 CT47B1P0C2W7 299 aaPredicted RBP12.71□□□□□ -0.37
SMURF1-204ENST00000480055 COL6A1P12109 1028 aa12.71□□□□□ -0.37
SMURF1-204ENST00000480055 SH3D19Q5HYK7 790 aa12.71□□□□□ -0.37
SMURF1-204ENST00000480055 TEX11Q8IYF3 940 aa12.71□□□□□ -0.37
SMURF1-204ENST00000480055 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
SMURF1-204ENST00000480055 AS3MTQ9HBK9 375 aa12.71□□□□□ -0.37
SMURF1-204ENST00000480055 HMG20BQ9P0W2 317 aa12.71□□□□□ -0.37
SMURF1-204ENST00000480055 LRP2BPQ9P2M1 347 aa12.71□□□□□ -0.37
SMURF1-204ENST00000480055 DNAH12Q6ZR08 3092 aa12.7□□□□□ -0.38
SMURF1-204ENST00000480055 USP17L5A8MUK1 530 aa12.7□□□□□ -0.38
SMURF1-204ENST00000480055 ST18O60284 1047 aa12.7□□□□□ -0.38
SMURF1-204ENST00000480055 MAP4K4O95819 1239 aaPredicted RBP12.7□□□□□ -0.38
SMURF1-204ENST00000480055 CAP2P40123 477 aa12.7□□□□□ -0.38
SMURF1-204ENST00000480055 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMURF1-204ENST00000480055 PI16Q6UXB8 463 aa12.7□□□□□ -0.38
SMURF1-204ENST00000480055 ZNF384Q8TF68 577 aa12.7□□□□□ -0.38
SMURF1-204ENST00000480055 SOCS4Q8WXH5 440 aa12.7□□□□□ -0.38
SMURF1-204ENST00000480055 NSUN4Q96CB9 384 aaKnown RBP12.7□□□□□ -0.38
SMURF1-204ENST00000480055 COL25A1Q9BXS0 654 aaPredicted RBP12.7□□□□□ -0.38
SMURF1-204ENST00000480055 ARIH1Q9Y4X5 557 aaPredicted RBP12.7□□□□□ -0.38
SMURF1-204ENST00000480055 ZNF236Q9UL36 1845 aa12.69□□□□□ -0.38
SMURF1-204ENST00000480055 LAMA2P24043 3122 aaKnown RBP12.69□□□□□ -0.38
SMURF1-204ENST00000480055 XRCC5P13010 732 aaKnown RBP12.69□□□□□ -0.38
SMURF1-204ENST00000480055 HOXB1P14653 301 aaPredicted RBP12.69□□□□□ -0.38
SMURF1-204ENST00000480055 IRX3P78415 501 aaPredicted RBP12.69□□□□□ -0.38
SMURF1-204ENST00000480055 RRP1BQ14684 758 aaKnown RBP12.69□□□□□ -0.38
SMURF1-204ENST00000480055 CCAR1Q8IX12 1150 aaKnown RBP12.69□□□□□ -0.38
SMURF1-204ENST00000480055 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMURF1-204ENST00000480055 TMOD4Q9NZQ9 345 aa12.69□□□□□ -0.38
SMURF1-204ENST00000480055 MYH8P13535 1937 aa12.68□□□□□ -0.38
SMURF1-204ENST00000480055 SPDYE16A6NNV3 312 aaPredicted RBP12.68□□□□□ -0.38
SMURF1-204ENST00000480055 BAG3O95817 575 aa12.68□□□□□ -0.38
SMURF1-204ENST00000480055 NUDT7P0C024 238 aa12.68□□□□□ -0.38
SMURF1-204ENST00000480055 CYP2B6P20813 491 aa12.68□□□□□ -0.38
SMURF1-204ENST00000480055 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMURF1-204ENST00000480055 TRMT44Q8IYL2 757 aaKnown RBP12.68□□□□□ -0.38
SMURF1-204ENST00000480055 TRMT2AQ8IZ69 625 aaKnown RBP12.68□□□□□ -0.38
SMURF1-204ENST00000480055 CRACR2BQ8N4Y2 399 aaPredicted RBP12.68□□□□□ -0.38
SMURF1-204ENST00000480055 SH3RF3Q8TEJ3 882 aaPredicted RBP12.68□□□□□ -0.38
SMURF1-204ENST00000480055 NUDT12Q9BQG2 462 aa12.68□□□□□ -0.38
SMURF1-204ENST00000480055 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
SMURF1-204ENST00000480055 PARP14Q460N5 1801 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 ZNFX1Q9P2E3 1918 aaKnown RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 GNAI2P04899 355 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 CENPBP07199 599 aaPredicted RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 UQCRFS1P1P0C7P4 283 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 ZKSCAN1P17029 563 aaPredicted RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 HOXA7P31268 230 aaPredicted RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 CACNB2Q08289 660 aaPredicted RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 MTMR2Q13614 643 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 LRRC26Q2I0M4 334 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 TTC39AQ5SRH9 613 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 FAM109BQ6ICB4 259 aaPredicted RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 ARHGAP45Q92619 1136 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 USP6NLQ92738 828 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 FRAT1Q92837 279 aaPredicted RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 GUCD1Q96NT3 240 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 WDR18Q9BV38 432 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 DHX36Q9H2U1 1008 aaKnown RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 CWC22Q9HCG8 908 aaKnown RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 TXNRD2Q9NNW7 524 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 AATFQ9NY61 560 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 PI4KBQ9UBF8 816 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.67□□□□□ -0.38
SMURF1-204ENST00000480055 A0A0G2JMZ2 1700 aa12.67□□□□□ -0.38
SMURF1-204ENST00000480055 IPO8O15397 1037 aaKnown RBP12.66□□□□□ -0.38
SMURF1-204ENST00000480055 PEX10O60683 326 aa12.66□□□□□ -0.38
SMURF1-204ENST00000480055 ARID4AP29374 1257 aaPredicted RBP12.66□□□□□ -0.38
SMURF1-204ENST00000480055 MAPK4P31152 587 aa12.66□□□□□ -0.38
SMURF1-204ENST00000480055 MCAMP43121 646 aa12.66□□□□□ -0.38
SMURF1-204ENST00000480055 HERVK_113P62684 666 aa12.66□□□□□ -0.38
SMURF1-204ENST00000480055 OS9Q13438 667 aaPredicted RBP12.66□□□□□ -0.38
SMURF1-204ENST00000480055 MTX1Q13505 466 aa12.66□□□□□ -0.38
SMURF1-204ENST00000480055 PDE3AQ14432 1141 aa12.66□□□□□ -0.38
SMURF1-204ENST00000480055 CCDC158Q5M9N0 1113 aa12.66□□□□□ -0.38
SMURF1-204ENST00000480055 MAPKAPK5Q8IW41 473 aa12.66□□□□□ -0.38
SMURF1-204ENST00000480055 GPRC5AQ8NFJ5 357 aa12.66□□□□□ -0.38
SMURF1-204ENST00000480055 TGFBRAP1Q8WUH2 860 aa12.66□□□□□ -0.38
SMURF1-204ENST00000480055 P2RX7Q99572 595 aaKnown RBP12.66□□□□□ -0.38
SMURF1-204ENST00000480055 EYSQ5T1H1 3165 aa12.66□□□□□ -0.38
SMURF1-204ENST00000480055 GDF11O95390 407 aa12.65□□□□□ -0.38
SMURF1-204ENST00000480055 ASNSP08243 561 aa12.65□□□□□ -0.38
SMURF1-204ENST00000480055 CCND3P30281 292 aaPredicted RBP12.65□□□□□ -0.38
SMURF1-204ENST00000480055 RGS2P41220 211 aa12.65□□□□□ -0.38
SMURF1-204ENST00000480055 BACE1P56817 501 aa12.65□□□□□ -0.38
SMURF1-204ENST00000480055 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
SMURF1-204ENST00000480055 NBR1Q14596 966 aa12.65□□□□□ -0.38
SMURF1-204ENST00000480055 MORN1Q5T089 497 aa12.65□□□□□ -0.38
SMURF1-204ENST00000480055 APBA2Q99767 749 aa12.65□□□□□ -0.38
SMURF1-204ENST00000480055 NAV1Q8NEY1 1877 aa12.65□□□□□ -0.38
SMURF1-204ENST00000480055 PLXNA1Q9UIW2 1896 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 C19orf81C9J6K1 198 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 USP17L10C9JJH3 530 aa12.64□□□□□ -0.39
SMURF1-204ENST00000480055 ERVK-9P63128 1117 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms