RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 MYL5Q02045 173 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 PREPLQ4J6C6 727 aaPredicted RBP12.31□□□□□ -0.44
CHD6-208ENST00000480022 DESI2Q9BSY9 194 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 IRX2Q9BZI1 471 aaPredicted RBP12.31□□□□□ -0.44
CHD6-208ENST00000480022 USP44Q9H0E7 712 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 KAT14Q9H8E8 782 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 NEDD4P46934 1319 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 CTAGE15A4D2H0 777 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 TMCO5BA8MYB1 307 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 POLRMTO00411 1230 aaKnown RBP12.31□□□□□ -0.44
CHD6-208ENST00000480022 IRF6O14896 467 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 MYO1BO43795 1136 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 KIF5CO60282 957 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 MMP10P09238 476 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 CCDC175P0C221 793 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 CTAGE8P0CG41 777 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 FOSBP53539 338 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 IRX1P78414 480 aaPredicted RBP12.31□□□□□ -0.44
CHD6-208ENST00000480022 TBX2Q13207 712 aaPredicted RBP12.31□□□□□ -0.44
CHD6-208ENST00000480022 MTX1Q13505 466 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 HSP90AB4PQ58FF6 505 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 WDR93Q6P2C0 686 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 CTAGE6Q86UF2 777 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 CTAGE4Q8IX94 777 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 AMOTL1Q8IY63 956 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 FAM76AQ8TAV0 307 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 BCAS4Q8TDM0 211 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 MRPL44Q9H9J2 332 aaKnown RBP12.31□□□□□ -0.44
CHD6-208ENST00000480022 CASZ1Q86V15 1759 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 NUP98P52948 1817 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 GRM8O00222 908 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 NTSR2O95665 410 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 PTPN21Q16825 1174 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 KIF4BQ2VIQ3 1234 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 EVI5LQ96CN4 794 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 MTFR1LQ9H019 292 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 SIL1Q9H173 461 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 TRMT112Q9UI30 125 aaKnown RBP12.3□□□□□ -0.44
CHD6-208ENST00000480022 ATXN2Q99700 1313 aaKnown RBP12.3□□□□□ -0.44
CHD6-208ENST00000480022 MYO1FO00160 1098 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 HIP1O00291 1037 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 FNTAP49354 379 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 SYNE4Q8N205 404 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 TC2NQ8N9U0 490 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 ZBTB38Q8NAP3 1195 aaPredicted RBP12.3□□□□□ -0.44
CHD6-208ENST00000480022 SMARCC2Q8TAQ2 1214 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 CD248Q9HCU0 757 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 C9orf78Q9NZ63 289 aaPredicted RBP12.3□□□□□ -0.44
CHD6-208ENST00000480022 HMG20BQ9P0W2 317 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 ODF2LQ9ULJ1 636 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 HPCAL4Q9UM19 191 aa12.3□□□□□ -0.44
CHD6-208ENST00000480022 FSBPO95073 299 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 SERPINB2P05120 415 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 NBPF7P0C2Y1 421 aaPredicted RBP12.29□□□□□ -0.44
CHD6-208ENST00000480022 PAX7P23759 505 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 NAIF1Q69YI7 327 aaPredicted RBP12.29□□□□□ -0.44
CHD6-208ENST00000480022 NBPF5PQ86XG9 351 aaPredicted RBP12.29□□□□□ -0.44
CHD6-208ENST00000480022 FAM89AQ96GI7 184 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 XAGE2Q96GT9 111 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 LLPHQ9BRT6 129 aaKnown RBP12.29□□□□□ -0.44
CHD6-208ENST00000480022 LZTFL1Q9NQ48 299 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 ATF5Q9Y2D1 282 aaPredicted RBP12.29□□□□□ -0.44
CHD6-208ENST00000480022 UTYO14607 1347 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 H7C1W4 665 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 PCCAP05165 728 aaPredicted RBP12.29□□□□□ -0.44
CHD6-208ENST00000480022 CASP7P55210 303 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 NMIQ13287 307 aaPredicted RBP12.29□□□□□ -0.44
CHD6-208ENST00000480022 CRYMQ14894 314 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 WHAMMP3Q1A5X7 153 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 UBE3BQ7Z3V4 1068 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 FAM227BQ96M60 508 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 SLC24A3Q9HC58 644 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 ECHDC1Q9NTX5 307 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 TAF6LQ9Y6J9 622 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 CTAGE9A4FU28 777 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 KLHL33A6NCF5 533 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 KIAA0754O94854 1291 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 ADKP55263 362 aaKnown RBP12.29□□□□□ -0.44
CHD6-208ENST00000480022 PPFIA1Q13136 1202 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 SF3A1Q15459 793 aaKnown RBP12.29□□□□□ -0.44
CHD6-208ENST00000480022 GPATCH3Q96I76 525 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 FANCLQ9NW38 375 aa12.29□□□□□ -0.44
CHD6-208ENST00000480022 ANKRD36CQ5JPF3 1778 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 EIF3HO15372 352 aaKnown RBP eCLIP12.28□□□□□ -0.446e-8■■□□□ 12.8
CHD6-208ENST00000480022 STIM1Q13586 685 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 ZNF569Q5MCW4 686 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 TPTE2Q6XPS3 522 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 OTUD6BQ8N6M0 293 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 CAPS2Q9BXY5 557 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 TRIM6Q9C030 488 aaPredicted RBP12.28□□□□□ -0.44
CHD6-208ENST00000480022 NYXQ9GZU5 481 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 RTEL1Q9NZ71 1219 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 SH3TC1Q8TE82 1336 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 PFKFB2O60825 505 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 ZNF202O95125 648 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 MRPL12P52815 198 aaKnown RBP12.28□□□□□ -0.44
CHD6-208ENST00000480022 ERFEQ4G0M1 354 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 B4GALNT4Q76KP1 1039 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
CHD6-208ENST00000480022 CCDC24Q8N4L8 307 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms