RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 FOCADQ5VW36 1801 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 UNCXA6NJT0 531 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 FAM196BA6NMK8 535 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 E7EWF7 191 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 PPP1R12BO60237 982 aaPredicted RBP11.37□□□□□ -0.59
CD46-214ENST00000480003 CTNND1O60716 968 aaKnown RBP11.37□□□□□ -0.59
CD46-214ENST00000480003 CELF2O95319 508 aaKnown RBP11.37□□□□□ -0.59
CD46-214ENST00000480003 SLC3A2P08195 630 aaKnown RBP11.37□□□□□ -0.59
CD46-214ENST00000480003 PCP11498 1178 aaKnown RBP11.37□□□□□ -0.59
CD46-214ENST00000480003 RASA1P20936 1047 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 FKBP1BP68106 108 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 JAG1P78504 1218 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 PDE4BQ07343 736 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 PPP1R15BQ5SWA1 713 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 RNF20Q5VTR2 975 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 MFSD6Q6ZSS7 791 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 STOX1Q6ZVD7 989 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 CRACR2BQ8N4Y2 399 aaPredicted RBP11.37□□□□□ -0.59
CD46-214ENST00000480003 JMYQ8N9B5 988 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.37□□□□□ -0.59
CD46-214ENST00000480003 FZD1Q9UP38 647 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 SNX14Q9Y5W7 946 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 SSC5DA1L4H1 1573 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 MYH1P12882 1939 aa11.37□□□□□ -0.59
CD46-214ENST00000480003 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
CD46-214ENST00000480003 PRDM1O75626 825 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 INPP5BP32019 993 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 NF2P35240 595 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 CAP2P40123 477 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 NT5C2P49902 561 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 CERKLQ49MI3 558 aaPredicted RBP11.36□□□□□ -0.59
CD46-214ENST00000480003 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.36□□□□□ -0.59
CD46-214ENST00000480003 MOB2Q70IA6 237 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 ARMC9Q7Z3E5 817 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 STK11IPQ8N1F8 1099 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 CCDC17Q96LX7 622 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.36□□□□□ -0.59
CD46-214ENST00000480003 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
CD46-214ENST00000480003 MKNK2Q9HBH9 465 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 ZNF287Q9HBT7 754 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 GBA2Q9HCG7 927 aaPredicted RBP11.36□□□□□ -0.59
CD46-214ENST00000480003 GINM1Q9NU53 330 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 ZSWIM5Q9P217 1185 aa11.36□□□□□ -0.59
CD46-214ENST00000480003 UBE2Q2LH0YL09 131 aa11.35□□□□□ -0.59
CD46-214ENST00000480003 AKR1B1P15121 316 aa11.35□□□□□ -0.59
CD46-214ENST00000480003 GUCY1A2P33402 732 aa11.35□□□□□ -0.59
CD46-214ENST00000480003 IREB2P48200 963 aaKnown RBP11.35□□□□□ -0.59
CD46-214ENST00000480003 RBM25P49756 843 aaKnown RBP11.35□□□□□ -0.59
CD46-214ENST00000480003 ANAPC15P60006 121 aa11.35□□□□□ -0.59
CD46-214ENST00000480003 PRKG1Q13976 671 aa11.35□□□□□ -0.59
CD46-214ENST00000480003 COL9A3Q14050 684 aaPredicted RBP11.35□□□□□ -0.59
CD46-214ENST00000480003 ADCK5Q3MIX3 580 aa11.35□□□□□ -0.59
CD46-214ENST00000480003 NOL9Q5SY16 702 aaKnown RBP11.35□□□□□ -0.59
CD46-214ENST00000480003 ZNF444Q8N0Y2 327 aaPredicted RBP11.35□□□□□ -0.59
CD46-214ENST00000480003 C2orf69Q8N8R5 385 aa11.35□□□□□ -0.59
CD46-214ENST00000480003 NEDD1Q8NHV4 660 aa11.35□□□□□ -0.59
CD46-214ENST00000480003 C22orf23Q9BZE7 217 aa11.35□□□□□ -0.59
CD46-214ENST00000480003 KRT23Q9C075 422 aa11.35□□□□□ -0.59
CD46-214ENST00000480003 TCP11L1Q9NUJ3 509 aa11.35□□□□□ -0.59
CD46-214ENST00000480003 ANGEL1Q9UNK9 670 aaKnown RBP11.35□□□□□ -0.59
CD46-214ENST00000480003 IGKV6D-41A0A0C4DH26 115 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 B4E1Z4 1266 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 ZKSCAN1P17029 563 aaPredicted RBP11.34□□□□□ -0.59
CD46-214ENST00000480003 NOVP48745 357 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 HTRA3P83110 453 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 TFAP4Q01664 338 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 EXOSC10Q01780 885 aaKnown RBP11.34□□□□□ -0.59
CD46-214ENST00000480003 KRT32Q14532 448 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 SIAH1Q8IUQ4 282 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 MB21D2Q8IYB1 491 aaPredicted RBP11.34□□□□□ -0.59
CD46-214ENST00000480003 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 ZKSCAN4Q969J2 545 aaPredicted RBP11.34□□□□□ -0.59
CD46-214ENST00000480003 WRNIP1Q96S55 665 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 KIF2CQ99661 725 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 TM6SF1Q9BZW5 370 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 CNNM2Q9H8M5 875 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 IL17RBQ9NRM6 502 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 SIPA1L1O43166 1804 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 DDX60LQ5H9U9 1706 aaKnown RBP11.34□□□□□ -0.59
CD46-214ENST00000480003 NEDD4P46934 1319 aa11.34□□□□□ -0.59
CD46-214ENST00000480003 RANBP6O60518 1105 aaKnown RBP11.33□□□□□ -0.6
CD46-214ENST00000480003 MCCP23508 829 aa11.33□□□□□ -0.6
CD46-214ENST00000480003 ABCB5Q2M3G0 1257 aa11.33□□□□□ -0.6
CD46-214ENST00000480003 SHROOM1Q2M3G4 852 aaPredicted RBP11.33□□□□□ -0.6
CD46-214ENST00000480003 FAM47AQ5JRC9 791 aa11.33□□□□□ -0.6
CD46-214ENST00000480003 CYB5R4Q7L1T6 521 aa11.33□□□□□ -0.6
CD46-214ENST00000480003 ANKRD13AQ8IZ07 590 aa11.33□□□□□ -0.6
CD46-214ENST00000480003 SCYL3Q8IZE3 742 aa11.33□□□□□ -0.6
CD46-214ENST00000480003 TBC1D32Q96NH3 1257 aa11.33□□□□□ -0.6
CD46-214ENST00000480003 NEK1Q96PY6 1258 aa11.33□□□□□ -0.6
CD46-214ENST00000480003 MTA3Q9BTC8 594 aa11.33□□□□□ -0.6
CD46-214ENST00000480003 TRIM34Q9BYJ4 488 aa11.33□□□□□ -0.6
CD46-214ENST00000480003 ZNF408Q9H9D4 720 aa11.33□□□□□ -0.6
CD46-214ENST00000480003 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 KDM4AO75164 1064 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 GDF11O95390 407 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 GH2P01242 217 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 ASNSP08243 561 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 PTPRAP18433 802 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms