RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 UPK3BL2E5RIL1 263 aa8.89□□□□□ -0.99
COMMD3-212ENST00000479958 CHMP4BP1P59074 171 aa8.89□□□□□ -0.99
COMMD3-212ENST00000479958 THAP5Q7Z6K1 395 aa8.89□□□□□ -0.99
COMMD3-212ENST00000479958 PIWIL2Q8TC59 973 aaKnown RBP8.89□□□□□ -0.99
COMMD3-212ENST00000479958 CYB5D2Q8WUJ1 264 aa8.89□□□□□ -0.99
COMMD3-212ENST00000479958 ZNF296Q8WUU4 475 aaPredicted RBP8.89□□□□□ -0.99
COMMD3-212ENST00000479958 REV1Q9UBZ9 1251 aa8.89□□□□□ -0.99
COMMD3-212ENST00000479958 TLR3O15455 904 aaKnown RBP8.88□□□□□ -0.99
COMMD3-212ENST00000479958 GRIN3BO60391 1043 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 GREM1O60565 184 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 HTR3BO95264 441 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 GARTP22102 1010 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 TNNI2P48788 182 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 ATG4DQ86TL0 474 aaPredicted RBP8.88□□□□□ -0.99
COMMD3-212ENST00000479958 KRTAP1-3Q8IUG1 177 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 SLFN12Q8IYM2 578 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 KCNQ5Q9NR82 932 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 MBNL3Q9NUK0 354 aaKnown RBP8.88□□□□□ -0.99
COMMD3-212ENST00000479958 H3BS24 57 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 RNASE1P07998 156 aaKnown RBP8.88□□□□□ -0.99
COMMD3-212ENST00000479958 CCDC74BQ96LY2 380 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 FMNL2Q96PY5 1086 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 SEMA3GQ9NS98 782 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 KLHL3Q9UH77 587 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 KCNH3Q9ULD8 1083 aa8.88□□□□□ -0.99
COMMD3-212ENST00000479958 POLR3KQ9Y2Y1 108 aaPredicted RBP8.88□□□□□ -0.99
COMMD3-212ENST00000479958 RBM47A0AV96 593 aaKnown RBP8.87□□□□□ -0.99
COMMD3-212ENST00000479958 ITGB5P18084 799 aa8.87□□□□□ -0.99
COMMD3-212ENST00000479958 DNAJB8Q8NHS0 232 aa8.87□□□□□ -0.99
COMMD3-212ENST00000479958 FBXO27Q8NI29 283 aa8.87□□□□□ -0.99
COMMD3-212ENST00000479958 UBE2FQ969M7 185 aa8.87□□□□□ -0.99
COMMD3-212ENST00000479958 LRRC3Q9BY71 257 aa8.87□□□□□ -0.99
COMMD3-212ENST00000479958 ZSWIM5Q9P217 1185 aa8.87□□□□□ -0.99
COMMD3-212ENST00000479958 ST14Q9Y5Y6 855 aa8.87□□□□□ -0.99
COMMD3-212ENST00000479958 CHURC1-FNTBB4DL54 471 aa8.86□□□□□ -0.99
COMMD3-212ENST00000479958 ZNF76P36508 570 aa8.86□□□□□ -0.99
COMMD3-212ENST00000479958 TNK2Q07912 1038 aa8.86□□□□□ -0.99
COMMD3-212ENST00000479958 PHACTR4Q8IZ21 702 aa8.86□□□□□ -0.99
COMMD3-212ENST00000479958 CCDC120Q96HB5 630 aa8.86□□□□□ -0.99
COMMD3-212ENST00000479958 BACH2Q9BYV9 841 aa8.86□□□□□ -0.99
COMMD3-212ENST00000479958 TRIT1Q9H3H1 467 aaKnown RBP8.86□□□□□ -0.99
COMMD3-212ENST00000479958 ATP13A1Q9HD20 1204 aa8.86□□□□□ -0.99
COMMD3-212ENST00000479958 GBP1P32455 592 aa8.85□□□□□ -0.99
COMMD3-212ENST00000479958 BRMS1Q9HCU9 246 aa8.85□□□□□ -0.99
COMMD3-212ENST00000479958 ADAMTS6Q9UKP5 1117 aa8.85□□□□□ -0.99
COMMD3-212ENST00000479958 UNC13AQ9UPW8 1703 aa8.84□□□□□ -0.99
COMMD3-212ENST00000479958 APOBRQ0VD83 1088 aa8.84□□□□□ -0.99
COMMD3-212ENST00000479958 TMPRSS7Q7RTY8 843 aa8.84□□□□□ -0.99
COMMD3-212ENST00000479958 PPP1R13LQ8WUF5 828 aa8.84□□□□□ -0.99
COMMD3-212ENST00000479958 CARS2Q9HA77 564 aaKnown RBP8.84□□□□□ -0.99
COMMD3-212ENST00000479958 METTL5Q9NRN9 209 aaKnown RBP8.84□□□□□ -0.99
COMMD3-212ENST00000479958 PCDHB14Q9Y5E9 798 aa8.84□□□□□ -0.99
COMMD3-212ENST00000479958 ATE1O95260 518 aa8.83□□□□□ -1
COMMD3-212ENST00000479958 MCM4P33991 863 aa8.83□□□□□ -1
COMMD3-212ENST00000479958 LCE3BQ5TA77 95 aa8.83□□□□□ -1
COMMD3-212ENST00000479958 LRRN4CLQ8ND94 238 aa8.83□□□□□ -1
COMMD3-212ENST00000479958 RNF141Q8WVD5 230 aa8.83□□□□□ -1
COMMD3-212ENST00000479958 GPATCH2Q9NW75 528 aa8.83□□□□□ -1
COMMD3-212ENST00000479958 ADAMTS1Q9UHI8 967 aa8.83□□□□□ -1
COMMD3-212ENST00000479958 ZNF165P49910 485 aa8.82□□□□□ -1
COMMD3-212ENST00000479958 SEZ6Q53EL9 994 aa8.82□□□□□ -1
COMMD3-212ENST00000479958 REXO1Q8N1G1 1221 aaKnown RBP8.82□□□□□ -1
COMMD3-212ENST00000479958 BAHD1Q8TBE0 780 aaPredicted RBP8.82□□□□□ -1
COMMD3-212ENST00000479958 NKD1Q969G9 470 aa8.82□□□□□ -1
COMMD3-212ENST00000479958 SPON2Q9BUD6 331 aa8.82□□□□□ -1
COMMD3-212ENST00000479958 NT5C1AQ9BXI3 368 aa8.82□□□□□ -1
COMMD3-212ENST00000479958 PRDM7Q9NQW5 492 aa8.82□□□□□ -1
COMMD3-212ENST00000479958 SLC22A31A6NKX4 558 aa8.81□□□□□ -1
COMMD3-212ENST00000479958 RAG1P15918 1043 aa8.81□□□□□ -1
COMMD3-212ENST00000479958 LRRFIP1Q32MZ4 808 aaKnown RBP8.81□□□□□ -1
COMMD3-212ENST00000479958 KIAA0825Q8IV33 1275 aa8.81□□□□□ -1
COMMD3-212ENST00000479958 RNF34Q969K3 372 aa8.81□□□□□ -1
COMMD3-212ENST00000479958 EHMT1Q9H9B1 1298 aa8.81□□□□□ -1
COMMD3-212ENST00000479958 RGS13O14921 159 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 PAPLNO95428 1278 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 AFMP43652 599 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 TRIM26Q12899 539 aaPredicted RBP8.8□□□□□ -1
COMMD3-212ENST00000479958 USP48Q86UV5 1035 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 Q96M66 194 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 KREMEN1Q96MU8 473 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 KIF2CQ99661 725 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 KRTAP4-12Q9BQ66 201 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 ASPNQ9BXN1 380 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 GPR62Q9BZJ7 368 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 UBP1Q9NZI7 540 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 GMIPQ9P107 970 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 TPP2P29144 1249 aaPredicted RBP8.8□□□□□ -1
COMMD3-212ENST00000479958 ARSHQ5FYA8 562 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 LDLRAD1Q5T700 205 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 GK5Q6ZS86 529 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 FLAD1Q8NFF5 587 aa8.8□□□□□ -1
COMMD3-212ENST00000479958 ASCC2Q9H1I8 757 aaPredicted RBP8.8□□□□□ -1
COMMD3-212ENST00000479958 DUSP15Q9H1R2 295 aaPredicted RBP8.8□□□□□ -1
COMMD3-212ENST00000479958 VAMP1P23763 118 aa8.79□□□□□ -1
COMMD3-212ENST00000479958 CREG2Q8IUH2 290 aa8.79□□□□□ -1
COMMD3-212ENST00000479958 DTWD2Q8NBA8 298 aa8.79□□□□□ -1
COMMD3-212ENST00000479958 SYTL4Q96C24 671 aaPredicted RBP8.79□□□□□ -1
COMMD3-212ENST00000479958 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.79□□□□□ -1
COMMD3-212ENST00000479958 CECR2Q9BXF3 1484 aa8.79□□□□□ -1
COMMD3-212ENST00000479958 BICRAQ9NZM4 1560 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms