RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 RASA3Q14644 834 aa13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 RAB11FIP4Q86YS3 637 aa13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 FANCBQ8NB91 859 aa13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 PNMA1Q8ND90 353 aa13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 NUP133Q8WUM0 1156 aa13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 MYL10Q9BUA6 226 aa13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 TMEM39BQ9GZU3 492 aa13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 ADARB2Q9NS39 739 aaKnown RBP13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 PGAP2Q9UHJ9 254 aa13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 STX8Q9UNK0 236 aa13.95□□□□□ -0.18
TM9SF4-206ENST00000479591 STX6O43752 255 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 BRD1O95696 1058 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 TOP1P11387 765 aaKnown RBP13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 RXRAP19793 462 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 SYT1P21579 422 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 CDC27P30260 824 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 ADD1P35611 737 aaKnown RBP13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 EPS15P42566 896 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 MAP3K10Q02779 954 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 TMEM179Q6ZVK1 233 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 RGS22Q8NE09 1264 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 CTCFLQ8NI51 663 aaPredicted RBP13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 TRPM4Q8TD43 1214 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 HOOK2Q96ED9 719 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 CEP95Q96GE4 821 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 L3MBTL3Q96JM7 780 aaPredicted RBP13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 TMEM47Q9BQJ4 181 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 FAM217BQ9NTX9 383 aaPredicted RBP13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 MTMR4Q9NYA4 1195 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 PPP2R3BQ9Y5P8 575 aa13.94□□□□□ -0.18
TM9SF4-206ENST00000479591 PITPNM2Q9BZ72 1349 aa13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 STK36Q9NRP7 1315 aa13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 MPHOSPH10O00566 681 aaKnown RBP13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 TTLL1O95922 423 aa13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 IFNAR1P17181 557 aa13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 KIF5BP33176 963 aa13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 NTRK3Q16288 839 aa13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 ABCB5Q2M3G0 1257 aa13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 LARP1BQ659C4 914 aaKnown RBP13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 CCDC144CPQ8IYA2 1237 aa13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 DDX11Q96FC9 970 aa13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 DEFB129Q9H1M3 183 aa13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 CABP5Q9NP86 173 aa13.93□□□□□ -0.18
TM9SF4-206ENST00000479591 GLTPD2A6NH11 291 aa13.92□□□□□ -0.18
TM9SF4-206ENST00000479591 FAM196BA6NMK8 535 aa13.92□□□□□ -0.18
TM9SF4-206ENST00000479591 GNAQP50148 359 aa13.92□□□□□ -0.18
TM9SF4-206ENST00000479591 PKP1Q13835 747 aa13.92□□□□□ -0.18
TM9SF4-206ENST00000479591 ANGEL2Q5VTE6 544 aaKnown RBP13.92□□□□□ -0.18
TM9SF4-206ENST00000479591 TRIM22Q8IYM9 498 aa13.92□□□□□ -0.18
TM9SF4-206ENST00000479591 WASF1Q92558 559 aa13.92□□□□□ -0.18
TM9SF4-206ENST00000479591 TEPSINQ96N21 525 aa13.92□□□□□ -0.18
TM9SF4-206ENST00000479591 KANSL2Q9H9L4 492 aa13.92□□□□□ -0.18
TM9SF4-206ENST00000479591 ORC3Q9UBD5 711 aaPredicted RBP13.92□□□□□ -0.18
TM9SF4-206ENST00000479591 SCN4AP35499 1836 aa13.92□□□□□ -0.18
TM9SF4-206ENST00000479591 ASTN2O75129 1339 aaPredicted RBP13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 FMNL1O95466 1100 aaPredicted RBP13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 ZSCAN22P10073 491 aaPredicted RBP13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 FDPSP14324 419 aaKnown RBP13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 HIRAP54198 1017 aaPredicted RBP13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 SSRP1Q08945 709 aaKnown RBP13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 GRM4Q14833 912 aa13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 TMTC3Q6ZXV5 915 aa13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 USP50Q70EL3 339 aaPredicted RBP13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 TNPO1Q92973 898 aaKnown RBP13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 GBP4Q96PP9 640 aa13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 RNF26Q9BY78 433 aaPredicted RBP13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 GGA3Q9NZ52 723 aa13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 NYAP2Q9P242 653 aa13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 ZDHHC9Q9Y397 364 aa13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 MYH4Q9Y623 1939 aa13.91□□□□□ -0.18
TM9SF4-206ENST00000479591 UTRNP46939 3433 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 IQCA1LA6NCM1 817 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 H3BQV1 296 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 SLURP2P0DP57 97 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 IFFO2Q5TF58 517 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 DCAF15Q66K64 600 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 MKL1Q969V6 931 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 LZTS2Q9BRK4 669 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 SLC26A6Q9BXS9 759 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 RBM27Q9P2N5 1060 aaKnown RBP13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 CLIP2Q9UDT6 1046 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 SYNPO2Q9UMS6 1093 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 MTMR6Q9Y217 621 aa13.9□□□□□ -0.18
TM9SF4-206ENST00000479591 VPS37CA5D8V6 355 aaPredicted RBP13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 GDF11O95390 407 aa13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 DEXIO95424 95 aa13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 GH2P01242 217 aa13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 AKAP17AQ02040 695 aaKnown RBP13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 ICA1Q05084 483 aa13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 CLEC17AQ6ZS10 378 aa13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 NBPF11Q86T75 865 aa13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 CDAN1Q8IWY9 1227 aa13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 ZC3H15Q8WU90 426 aaKnown RBP13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 PHKBQ93100 1093 aa13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 ATP6V1DQ9Y5K8 247 aa13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 WDR90Q96KV7 1748 aa13.89□□□□□ -0.19
TM9SF4-206ENST00000479591 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms