RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 CLIC5Q9NZA1 410 aa7.22□□□□□ -1.25
RC3H1-204ENST00000479099 USP25Q9UHP3 1055 aa7.22□□□□□ -1.25
RC3H1-204ENST00000479099 FBXO2Q9UK22 296 aaPredicted RBP7.22□□□□□ -1.25
RC3H1-204ENST00000479099 RTCBQ9Y3I0 505 aaKnown RBP7.22□□□□□ -1.25
RC3H1-204ENST00000479099 KLRG2A4D1S0 409 aaPredicted RBP7.21□□□□□ -1.26
RC3H1-204ENST00000479099 HIP1RO75146 1068 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 SARSP49591 514 aaKnown RBP7.21□□□□□ -1.26
RC3H1-204ENST00000479099 NRLP54845 237 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 GEMIN4P57678 1058 aaKnown RBP7.21□□□□□ -1.26
RC3H1-204ENST00000479099 FAM193AP78312 1265 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 PICALMQ13492 652 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 HYIQ5T013 277 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 IL31Q6EBC2 164 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 NECAB2Q7Z6G3 386 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 MORC1Q86VD1 984 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 TREML1Q86YW5 311 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 TTC30BQ8N4P2 665 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 UBR7Q8N806 425 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 ZSWIM2Q8NEG5 633 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 PPHLN1Q8NEY8 458 aaKnown RBP7.21□□□□□ -1.26
RC3H1-204ENST00000479099 CCDC74AQ96AQ1 378 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 TRMT2BQ96GJ1 504 aaKnown RBP7.21□□□□□ -1.26
RC3H1-204ENST00000479099 NOB1Q9ULX3 412 aaKnown RBP7.21□□□□□ -1.26
RC3H1-204ENST00000479099 MAPRE3Q9UPY8 281 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 AKAP2Q9Y2D5 859 aa7.21□□□□□ -1.26
RC3H1-204ENST00000479099 CTDP1Q9Y5B0 961 aaPredicted RBP7.21□□□□□ -1.26
RC3H1-204ENST00000479099 IRS4O14654 1257 aaPredicted RBP7.2□□□□□ -1.26
RC3H1-204ENST00000479099 PRPF3O43395 683 aaKnown RBP7.2□□□□□ -1.26
RC3H1-204ENST00000479099 RFPL1O75677 317 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 NBPF7P0C2Y1 421 aaPredicted RBP7.2□□□□□ -1.26
RC3H1-204ENST00000479099 H2AFB1P0C5Y9 115 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 H2AFB2P0C5Z0 115 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 PPM1FP49593 454 aaPredicted RBP7.2□□□□□ -1.26
RC3H1-204ENST00000479099 NEK3P51956 506 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 MLLT1Q03111 559 aaPredicted RBP7.2□□□□□ -1.26
RC3H1-204ENST00000479099 LONRF1Q17RB8 773 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 FBXO11Q86XK2 927 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 PASD1Q8IV76 773 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 PJA1Q8NG27 643 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 RIN3Q8TB24 985 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 EPS8L3Q8TE67 593 aaKnown RBP7.2□□□□□ -1.26
RC3H1-204ENST00000479099 HOOK2Q96ED9 719 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 TTC14Q96N46 770 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 STRBPQ96SI9 672 aaKnown RBP7.2□□□□□ -1.26
RC3H1-204ENST00000479099 SARGQ9BW04 601 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 LGR6Q9HBX8 967 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 OBP2AQ9NY56 170 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 TLR7Q9NYK1 1049 aaKnown RBP7.2□□□□□ -1.26
RC3H1-204ENST00000479099 USP21Q9UK80 565 aa7.2□□□□□ -1.26
RC3H1-204ENST00000479099 GSG1L2A8MUP6 293 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 MINDY4BA8MYZ0 360 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 DHX16O60231 1041 aaKnown RBP7.19□□□□□ -1.26
RC3H1-204ENST00000479099 GREM1O60565 184 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 XYLBO75191 536 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 RFPL3O75679 317 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 EYA4O95677 639 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 PCSK2P16519 638 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 GBP2P32456 591 aaPredicted RBP7.19□□□□□ -1.26
RC3H1-204ENST00000479099 HALP42357 657 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 TERF1P54274 439 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 RBM10P98175 930 aaKnown RBP7.19□□□□□ -1.26
RC3H1-204ENST00000479099 FXNQ16595 210 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 SLC4A8Q2Y0W8 1093 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 TMEM67Q5HYA8 995 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 WFDC8Q8IUA0 241 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 SUGP1Q8IWZ8 645 aaKnown RBP7.19□□□□□ -1.26
RC3H1-204ENST00000479099 CMTR1Q8N1G2 835 aaKnown RBP7.19□□□□□ -1.26
RC3H1-204ENST00000479099 ATXN2LQ8WWM7 1075 aaKnown RBP7.19□□□□□ -1.26
RC3H1-204ENST00000479099 ZNF669Q96BR6 464 aaPredicted RBP7.19□□□□□ -1.26
RC3H1-204ENST00000479099 CHMP4CQ96CF2 233 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 GPR101Q96P66 508 aaPredicted RBP7.19□□□□□ -1.26
RC3H1-204ENST00000479099 AASDHPPTQ9NRN7 309 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 PFDN2Q9UHV9 154 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 PUF60Q9UHX1 559 aaKnown RBP7.19□□□□□ -1.26
RC3H1-204ENST00000479099 USP20Q9Y2K6 914 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 RABGAP1Q9Y3P9 1069 aa7.19□□□□□ -1.26
RC3H1-204ENST00000479099 RASSF10A6NK89 507 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 EIF2AK2P19525 551 aaKnown RBP7.18□□□□□ -1.26
RC3H1-204ENST00000479099 POLD1P28340 1107 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 ZAP70P43403 619 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 CASP7P55210 303 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 PLAURQ03405 335 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 SSRP1Q08945 709 aaKnown RBP7.18□□□□□ -1.26
RC3H1-204ENST00000479099 MTMR1Q13613 665 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 SEPT6Q14141 434 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 ALDH1L2Q3SY69 923 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 PRSS36Q5K4E3 855 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 C1QTNF12Q5T7M4 302 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 PDXDC1Q6P996 788 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 FBXL19Q6PCT2 694 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 CCDC81Q6ZN84 652 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 SPATC1Q76KD6 591 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 ETFBKMTQ8IXQ9 262 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 SKA1Q96BD8 255 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 MPP4Q96JB8 637 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 RHOVQ96L33 236 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 TSPAN18Q96SJ8 248 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 SMG9Q9H0W8 520 aaKnown RBP7.18□□□□□ -1.26
RC3H1-204ENST00000479099 ATG3Q9NT62 314 aa7.18□□□□□ -1.26
RC3H1-204ENST00000479099 ZMYM5Q9UJ78 669 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms