RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 TRIM34Q9BYJ4 488 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 ZNF287Q9HBT7 754 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 MTMR4Q9NYA4 1195 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 HPS5Q9UPZ3 1129 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 ATAD5Q96QE3 1844 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 DOCK1Q14185 1865 aa15.42■□□□□ 0.06
CHD3-210ENST00000479080 A0A1W2PRG0 241 aa15.41■□□□□ 0.06
CHD3-210ENST00000479080 MAP3K11Q16584 847 aa15.41■□□□□ 0.06
CHD3-210ENST00000479080 ME3Q16798 604 aa15.41■□□□□ 0.06
CHD3-210ENST00000479080 NOL9Q5SY16 702 aaKnown RBP15.41■□□□□ 0.06
CHD3-210ENST00000479080 TMEM179Q6ZVK1 233 aa15.41■□□□□ 0.06
CHD3-210ENST00000479080 WRNIP1Q96S55 665 aa15.41■□□□□ 0.06
CHD3-210ENST00000479080 TMEM47Q9BQJ4 181 aa15.41■□□□□ 0.06
CHD3-210ENST00000479080 MYL10Q9BUA6 226 aa15.41■□□□□ 0.06
CHD3-210ENST00000479080 SNCAIPQ9Y6H5 919 aa15.41■□□□□ 0.06
CHD3-210ENST00000479080 NID2Q14112 1375 aa15.4■□□□□ 0.06
CHD3-210ENST00000479080 MPHOSPH10O00566 681 aaKnown RBP15.4■□□□□ 0.06
CHD3-210ENST00000479080 ST18O60284 1047 aa15.4■□□□□ 0.06
CHD3-210ENST00000479080 DTNBO60941 627 aa15.4■□□□□ 0.06
CHD3-210ENST00000479080 WTAPQ15007 396 aa15.4■□□□□ 0.06
CHD3-210ENST00000479080 APOA5Q6Q788 366 aa15.4■□□□□ 0.06
CHD3-210ENST00000479080 IQCA1Q86XH1 822 aa15.4■□□□□ 0.06
CHD3-210ENST00000479080 DGKHQ86XP1 1220 aa15.4■□□□□ 0.06
CHD3-210ENST00000479080 SCYL3Q8IZE3 742 aa15.4■□□□□ 0.06
CHD3-210ENST00000479080 ZNF784Q8NCA9 323 aaPredicted RBP15.4■□□□□ 0.06
CHD3-210ENST00000479080 ACER1Q8TDN7 264 aa15.4■□□□□ 0.06
CHD3-210ENST00000479080 UBAC1Q9BSL1 405 aa15.4■□□□□ 0.06
CHD3-210ENST00000479080 PASKQ96RG2 1323 aa15.4■□□□□ 0.06
CHD3-210ENST00000479080 PHIPQ8WWQ0 1821 aa15.39■□□□□ 0.05
CHD3-210ENST00000479080 KLF18A0A0U1RQI7 1052 aa15.39■□□□□ 0.05
CHD3-210ENST00000479080 CTNND1O60716 968 aaKnown RBP15.39■□□□□ 0.05
CHD3-210ENST00000479080 EEF2P13639 858 aaKnown RBP15.39■□□□□ 0.05
CHD3-210ENST00000479080 RXRAP19793 462 aa15.39■□□□□ 0.05
CHD3-210ENST00000479080 PDIA3P30101 505 aaKnown RBP15.39■□□□□ 0.05
CHD3-210ENST00000479080 ECE1P42892 770 aa15.39■□□□□ 0.05
CHD3-210ENST00000479080 VGLL4Q14135 290 aa15.39■□□□□ 0.05
CHD3-210ENST00000479080 KIAA1755Q5JYT7 1200 aa15.39■□□□□ 0.05
CHD3-210ENST00000479080 CST9Q5W186 159 aa15.39■□□□□ 0.05
CHD3-210ENST00000479080 LRRC47Q8N1G4 583 aaKnown RBP15.39■□□□□ 0.05
CHD3-210ENST00000479080 HOOK2Q96ED9 719 aa15.39■□□□□ 0.05
CHD3-210ENST00000479080 TMX3Q96JJ7 454 aa15.39■□□□□ 0.05
CHD3-210ENST00000479080 CLMNQ96JQ2 1002 aa15.39■□□□□ 0.05
CHD3-210ENST00000479080 FAM217BQ9NTX9 383 aaPredicted RBP15.39■□□□□ 0.05
CHD3-210ENST00000479080 NYAP2Q9P242 653 aa15.39■□□□□ 0.05
CHD3-210ENST00000479080 K7ELQ4 463 aaPredicted RBP15.38■□□□□ 0.05
CHD3-210ENST00000479080 SLC4A3P48751 1232 aa15.38■□□□□ 0.05
CHD3-210ENST00000479080 ICA1Q05084 483 aa15.38■□□□□ 0.05
CHD3-210ENST00000479080 TROAPQ12815 778 aa15.38■□□□□ 0.05
CHD3-210ENST00000479080 RAB3GAP1Q15042 981 aa15.38■□□□□ 0.05
CHD3-210ENST00000479080 SLC35G1Q2M3R5 365 aa15.38■□□□□ 0.05
CHD3-210ENST00000479080 LDLRAD1Q5T700 205 aa15.38■□□□□ 0.05
CHD3-210ENST00000479080 IFIT1BQ5T764 474 aaKnown RBP15.38■□□□□ 0.05
CHD3-210ENST00000479080 ZNF654Q8IZM8 581 aa15.38■□□□□ 0.05
CHD3-210ENST00000479080 NECAB1Q8N987 351 aa15.38■□□□□ 0.05
CHD3-210ENST00000479080 CNKSR2Q8WXI2 1034 aa15.38■□□□□ 0.05
CHD3-210ENST00000479080 CLIP2Q9UDT6 1046 aa15.38■□□□□ 0.05
CHD3-210ENST00000479080 LIMCH1Q9UPQ0 1083 aa15.38■□□□□ 0.05
CHD3-210ENST00000479080 UBE2Q2LH0YL09 131 aa15.37■□□□□ 0.05
CHD3-210ENST00000479080 PFKFB2O60825 505 aa15.37■□□□□ 0.05
CHD3-210ENST00000479080 PTPRAP18433 802 aa15.37■□□□□ 0.05
CHD3-210ENST00000479080 CDC27P30260 824 aa15.37■□□□□ 0.05
CHD3-210ENST00000479080 SCRN1Q12765 414 aa15.37■□□□□ 0.05
CHD3-210ENST00000479080 DGKZQ13574 1117 aa15.37■□□□□ 0.05
CHD3-210ENST00000479080 CUL4AQ13619 759 aa15.37■□□□□ 0.05
CHD3-210ENST00000479080 MKL1Q969V6 931 aa15.37■□□□□ 0.05
CHD3-210ENST00000479080 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
CHD3-210ENST00000479080 ZNF408Q9H9D4 720 aa15.37■□□□□ 0.05
CHD3-210ENST00000479080 KANSL2Q9H9L4 492 aa15.37■□□□□ 0.05
CHD3-210ENST00000479080 STX8Q9UNK0 236 aa15.37■□□□□ 0.05
CHD3-210ENST00000479080 GOLGA8BA8MQT2 603 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 CELF2O95319 508 aaKnown RBP15.36■□□□□ 0.05
CHD3-210ENST00000479080 CTDNEP1O95476 244 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 TTLL1O95922 423 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 ASNSP08243 561 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 TOP1P11387 765 aaKnown RBP15.36■□□□□ 0.05
CHD3-210ENST00000479080 GJA5P36382 358 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 MAP3K9P80192 1104 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 STK3Q13188 491 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 SART3Q15020 963 aaKnown RBP15.36■□□□□ 0.05
CHD3-210ENST00000479080 ANKRD1Q15327 319 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 CCDC178Q5BJE1 867 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 PNMA1Q8ND90 353 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 IL27Q8NEV9 243 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 NCOA5Q9HCD5 579 aaKnown RBP15.36■□□□□ 0.05
CHD3-210ENST00000479080 CABP5Q9NP86 173 aa15.36■□□□□ 0.05
CHD3-210ENST00000479080 ERICH2A1L162 156 aa15.35■□□□□ 0.05
CHD3-210ENST00000479080 PPP1R12BO60237 982 aaPredicted RBP15.35■□□□□ 0.05
CHD3-210ENST00000479080 SNHG28P0DPA3 235 aa15.35■□□□□ 0.05
CHD3-210ENST00000479080 ANP32AP39687 249 aaKnown RBP15.35■□□□□ 0.05
CHD3-210ENST00000479080 IREB2P48200 963 aaKnown RBP15.35■□□□□ 0.05
CHD3-210ENST00000479080 MCM2P49736 904 aa15.35■□□□□ 0.05
CHD3-210ENST00000479080 FGD1P98174 961 aa15.35■□□□□ 0.05
CHD3-210ENST00000479080 MICU3Q86XE3 530 aa15.35■□□□□ 0.05
CHD3-210ENST00000479080 CCDC83Q8IWF9 413 aa15.35■□□□□ 0.05
CHD3-210ENST00000479080 HSCBQ8IWL3 235 aa15.35■□□□□ 0.05
CHD3-210ENST00000479080 CCDC144CPQ8IYA2 1237 aa15.35■□□□□ 0.05
CHD3-210ENST00000479080 GTF3C6Q969F1 213 aa15.35■□□□□ 0.05
CHD3-210ENST00000479080 GBA2Q9HCG7 927 aaPredicted RBP15.35■□□□□ 0.05
CHD3-210ENST00000479080 GINM1Q9NU53 330 aa15.35■□□□□ 0.05
CHD3-210ENST00000479080 TMX2Q9Y320 296 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms