RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 RPAP1Q9BWH6 1393 aaPredicted RBP7.27□□□□□ -1.25
CMSS1-203ENST00000478909 ZNF609O15014 1411 aa7.27□□□□□ -1.25
CMSS1-203ENST00000478909 EYA2O00167 538 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 C21orf2O43822 256 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 ZFYP08048 801 aaPredicted RBP7.26□□□□□ -1.25
CMSS1-203ENST00000478909 EPXP11678 715 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 HOXB4P17483 251 aaPredicted RBP7.26□□□□□ -1.25
CMSS1-203ENST00000478909 HIRAP54198 1017 aaPredicted RBP7.26□□□□□ -1.25
CMSS1-203ENST00000478909 NECTIN1Q15223 517 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 TSHZ3Q63HK5 1081 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 CWC27Q6UX04 472 aaKnown RBP7.26□□□□□ -1.25
CMSS1-203ENST00000478909 ZBTB38Q8NAP3 1195 aaPredicted RBP7.26□□□□□ -1.25
CMSS1-203ENST00000478909 ZNF512BQ96KM6 892 aaPredicted RBP7.26□□□□□ -1.25
CMSS1-203ENST00000478909 HELLSQ9NRZ9 838 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 MARK1Q9P0L2 795 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 HCN4Q9Y3Q4 1203 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 SNX14Q9Y5W7 946 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 GPC6Q9Y625 555 aaPredicted RBP7.26□□□□□ -1.25
CMSS1-203ENST00000478909 LRP5O75197 1615 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 LTBP4Q8N2S1 1624 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 MAP3K15Q6ZN16 1313 aa7.26□□□□□ -1.25
CMSS1-203ENST00000478909 EXOC5O00471 708 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 SSFA2P28290 1259 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 ADH6P28332 368 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 IL6STP40189 918 aaPredicted RBP7.25□□□□□ -1.25
CMSS1-203ENST00000478909 KCNJ4P48050 445 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 SEC13P55735 322 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 ZNF445P59923 1031 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 FOXO4P98177 505 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 LAMC2Q13753 1193 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 CCDC57Q2TAC2 916 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 CRTC2Q53ET0 693 aaPredicted RBP7.25□□□□□ -1.25
CMSS1-203ENST00000478909 GPAT2Q6NUI2 795 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 LMBR1LQ6UX01 489 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 RUFY3Q7L099 469 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 KBTBD3Q8NAB2 608 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 TMEM87AQ8NBN3 555 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 ANP32BQ92688 251 aaKnown RBP7.25□□□□□ -1.25
CMSS1-203ENST00000478909 RRAGCQ9HB90 399 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 AVENQ9NQS1 362 aaPredicted RBP7.25□□□□□ -1.25
CMSS1-203ENST00000478909 BTG4Q9NY30 223 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 DBNLQ9UJU6 430 aaKnown RBP7.25□□□□□ -1.25
CMSS1-203ENST00000478909 PALD1Q9ULE6 856 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 MKL2Q9ULH7 1088 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 PA2G4Q9UQ80 394 aaKnown RBP7.25□□□□□ -1.25
CMSS1-203ENST00000478909 CHMP3Q9Y3E7 222 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 LAMB2P55268 1798 aa7.25□□□□□ -1.25
CMSS1-203ENST00000478909 PHLPP1O60346 1717 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 DOT1LQ8TEK3 1739 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 CARMIL3Q8ND23 1372 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 RTL9Q8NET4 1388 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 PPP1R12BO60237 982 aaPredicted RBP7.24□□□□□ -1.25
CMSS1-203ENST00000478909 LETM1O95202 739 aaPredicted RBP7.24□□□□□ -1.25
CMSS1-203ENST00000478909 CSF1RP07333 972 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 NCLP19338 710 aaKnown RBP7.24□□□□□ -1.25
CMSS1-203ENST00000478909 CASTP20810 708 aaKnown RBP7.24□□□□□ -1.25
CMSS1-203ENST00000478909 AMPD1P23109 780 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 HMGB2P26583 209 aaKnown RBP7.24□□□□□ -1.25
CMSS1-203ENST00000478909 PCBP4P57723 403 aaKnown RBP7.24□□□□□ -1.25
CMSS1-203ENST00000478909 PTK7Q13308 1070 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 MCMDC2Q4G0Z9 681 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 EPHA10Q5JZY3 1008 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 ZNF468Q5VIY5 522 aaPredicted RBP7.24□□□□□ -1.25
CMSS1-203ENST00000478909 C1orf53Q5VUE5 145 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 ZSCAN25Q6NSZ9 544 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 FCHSD1Q86WN1 690 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 FBXL16Q8N461 479 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 DDX54Q8TDD1 881 aaKnown RBP7.24□□□□□ -1.25
CMSS1-203ENST00000478909 SMARCC1Q92922 1105 aaPredicted RBP7.24□□□□□ -1.25
CMSS1-203ENST00000478909 BTBD6Q96KE9 485 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 DSCC1Q9BVC3 393 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 PHACTR1Q9C0D0 580 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 NEUROD4Q9HD90 331 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 PDRG1Q9NUG6 133 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 PRR12Q9ULL5 1215 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 KIF3AQ9Y496 699 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 RBM8AQ9Y5S9 174 aaKnown RBP7.24□□□□□ -1.25
CMSS1-203ENST00000478909 DDX49Q9Y6V7 483 aaKnown RBP7.24□□□□□ -1.25
CMSS1-203ENST00000478909 ARAP2Q8WZ64 1704 aa7.24□□□□□ -1.25
CMSS1-203ENST00000478909 IGSF3O75054 1194 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 LMOD1P29536 600 aaPredicted RBP7.23□□□□□ -1.25
CMSS1-203ENST00000478909 TFCP2Q12800 502 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 NMIQ13287 307 aaPredicted RBP7.23□□□□□ -1.25
CMSS1-203ENST00000478909 IFIT5Q13325 482 aaKnown RBP7.23□□□□□ -1.25
CMSS1-203ENST00000478909 GRIN2CQ14957 1233 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 PARP10Q53GL7 1025 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 CCDC158Q5M9N0 1113 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 CREB3L3Q68CJ9 461 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 TMED8Q6PL24 325 aaPredicted RBP7.23□□□□□ -1.25
CMSS1-203ENST00000478909 BLOC1S2Q6QNY1 142 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 LINC00114Q6XXX2 140 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 ATG9AQ7Z3C6 839 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 PIGBQ92521 554 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 HSH2DQ96JZ2 352 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 SIL1Q9H173 461 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 CTNNA3Q9UI47 895 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 SMC3Q9UQE7 1217 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 ATRNO75882 1429 aa7.23□□□□□ -1.25
CMSS1-203ENST00000478909 NUP98P52948 1817 aa7.22□□□□□ -1.25
CMSS1-203ENST00000478909 SLIT2O94813 1529 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms