RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 Q3C1V9 767 aa26.56■■□□□ 1.84
MCF2L2-210ENST00000478652 CHMP4BQ9H444 224 aaKnown RBP26.56■■□□□ 1.84
MCF2L2-210ENST00000478652 ARMT1Q9H993 441 aa26.56■■□□□ 1.84
MCF2L2-210ENST00000478652 DCP1AQ9NPI6 582 aaPredicted RBP26.56■■□□□ 1.84
MCF2L2-210ENST00000478652 MCM9Q9NXL9 1143 aa26.56■■□□□ 1.84
MCF2L2-210ENST00000478652 SMARCA5O60264 1052 aaPredicted RBP26.55■■□□□ 1.84
MCF2L2-210ENST00000478652 ATP5JP18859 108 aa26.55■■□□□ 1.84
MCF2L2-210ENST00000478652 ADD2P35612 726 aa26.55■■□□□ 1.84
MCF2L2-210ENST00000478652 PDE3AQ14432 1141 aa26.55■■□□□ 1.84
MCF2L2-210ENST00000478652 GPRC5AQ8NFJ5 357 aa26.55■■□□□ 1.84
MCF2L2-210ENST00000478652 PAGR1Q9BTK6 254 aa26.55■■□□□ 1.84
MCF2L2-210ENST00000478652 PORCNQ9H237 461 aa26.55■■□□□ 1.84
MCF2L2-210ENST00000478652 PRKAB2O43741 272 aa26.54■■□□□ 1.84
MCF2L2-210ENST00000478652 HMGCRP04035 888 aa26.54■■□□□ 1.84
MCF2L2-210ENST00000478652 ERVK-9P63128 1117 aa26.54■■□□□ 1.84
MCF2L2-210ENST00000478652 ERVK-24P63145 666 aa26.54■■□□□ 1.84
MCF2L2-210ENST00000478652 SLC44A5Q8NCS7 719 aa26.54■■□□□ 1.84
MCF2L2-210ENST00000478652 TRIB2Q92519 343 aa26.54■■□□□ 1.84
MCF2L2-210ENST00000478652 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.54■■□□□ 1.84
MCF2L2-210ENST00000478652 COLQQ9Y215 455 aaPredicted RBP26.54■■□□□ 1.84
MCF2L2-210ENST00000478652 A0A0G2JMZ2 1700 aa26.53■■□□□ 1.84
MCF2L2-210ENST00000478652 SEPT2Q15019 361 aa26.53■■□□□ 1.84
MCF2L2-210ENST00000478652 DPF3Q92784 378 aa26.53■■□□□ 1.84
MCF2L2-210ENST00000478652 HAUS7Q99871 368 aa26.53■■□□□ 1.84
MCF2L2-210ENST00000478652 KIAA1683Q9H0B3 1180 aa26.53■■□□□ 1.84
MCF2L2-210ENST00000478652 SMIM22K7EJ46 135 aa26.52■■□□□ 1.84
MCF2L2-210ENST00000478652 MBD4O95243 580 aa26.52■■□□□ 1.84
MCF2L2-210ENST00000478652 VCAM1P19320 739 aa26.52■■□□□ 1.84
MCF2L2-210ENST00000478652 CYP2B6P20813 491 aa26.52■■□□□ 1.84
MCF2L2-210ENST00000478652 CRISPLD2Q9H0B8 497 aa26.52■■□□□ 1.84
MCF2L2-210ENST00000478652 CABP5Q9NP86 173 aa26.52■■□□□ 1.84
MCF2L2-210ENST00000478652 COL11A1P12107 1806 aaPredicted RBP26.51■■□□□ 1.83
MCF2L2-210ENST00000478652 CNMDO75829 334 aa26.51■■□□□ 1.83
MCF2L2-210ENST00000478652 DYNLL2Q96FJ2 89 aa26.51■■□□□ 1.83
MCF2L2-210ENST00000478652 LRRCC1Q9C099 1032 aa26.51■■□□□ 1.83
MCF2L2-210ENST00000478652 USP17L15C9J2P7 530 aa26.5■■□□□ 1.83
MCF2L2-210ENST00000478652 USP17L13C9JLJ4 530 aa26.5■■□□□ 1.83
MCF2L2-210ENST00000478652 USP17L11C9JVI0 530 aa26.5■■□□□ 1.83
MCF2L2-210ENST00000478652 USP17L18D6R9N7 530 aa26.5■■□□□ 1.83
MCF2L2-210ENST00000478652 USP17L22D6RA61 530 aa26.5■■□□□ 1.83
MCF2L2-210ENST00000478652 USP17L17D6RBQ6 530 aa26.5■■□□□ 1.83
MCF2L2-210ENST00000478652 USP17L19D6RCP7 530 aa26.5■■□□□ 1.83
MCF2L2-210ENST00000478652 USP17L20D6RJB6 530 aa26.5■■□□□ 1.83
MCF2L2-210ENST00000478652 TFRCP02786 760 aaKnown RBP26.5■■□□□ 1.83
MCF2L2-210ENST00000478652 USP14P54578 494 aa26.5■■□□□ 1.83
MCF2L2-210ENST00000478652 USP17L24Q0WX57 530 aa26.5■■□□□ 1.83
MCF2L2-210ENST00000478652 CYP2D7A0A087X1C5 515 aa26.49■■□□□ 1.83
MCF2L2-210ENST00000478652 A0A1W2PRG0 241 aa26.49■■□□□ 1.83
MCF2L2-210ENST00000478652 CATSPERGQ6ZRH7 1159 aa26.49■■□□□ 1.83
MCF2L2-210ENST00000478652 GPR142Q7Z601 462 aa26.49■■□□□ 1.83
MCF2L2-210ENST00000478652 GTF3C2Q8WUA4 911 aaPredicted RBP26.49■■□□□ 1.83
MCF2L2-210ENST00000478652 NUDT12Q9BQG2 462 aa26.49■■□□□ 1.83
MCF2L2-210ENST00000478652 HTATIP2Q9BUP3 242 aa26.49■■□□□ 1.83
MCF2L2-210ENST00000478652 GREB1LQ9C091 1923 aaPredicted RBP26.49■■□□□ 1.83
MCF2L2-210ENST00000478652 MPHOSPH10O00566 681 aaKnown RBP26.48■■□□□ 1.83
MCF2L2-210ENST00000478652 MAPK4P31152 587 aa26.48■■□□□ 1.83
MCF2L2-210ENST00000478652 CLEC10AQ8IUN9 316 aa26.48■■□□□ 1.83
MCF2L2-210ENST00000478652 DIS3LQ8TF46 1054 aaKnown RBP26.48■■□□□ 1.83
MCF2L2-210ENST00000478652 SOCS4Q8WXH5 440 aa26.48■■□□□ 1.83
MCF2L2-210ENST00000478652 USP6NLQ92738 828 aa26.48■■□□□ 1.83
MCF2L2-210ENST00000478652 ZNFX1Q9P2E3 1918 aaKnown RBP26.47■■□□□ 1.83
MCF2L2-210ENST00000478652 RPTORQ8N122 1335 aa26.47■■□□□ 1.83
MCF2L2-210ENST00000478652 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.47■■□□□ 1.83
MCF2L2-210ENST00000478652 RPAP3Q9H6T3 665 aaPredicted RBP26.47■■□□□ 1.83
MCF2L2-210ENST00000478652 RABGAP1Q9Y3P9 1069 aa26.47■■□□□ 1.83
MCF2L2-210ENST00000478652 FXR1P51114 621 aaKnown RBP eCLIP26.46■■□□□ 1.83
MCF2L2-210ENST00000478652 CCL14Q16627 93 aa26.46■■□□□ 1.83
MCF2L2-210ENST00000478652 MORN1Q5T089 497 aa26.46■■□□□ 1.83
MCF2L2-210ENST00000478652 MAP3K21Q5TCX8 1036 aa26.46■■□□□ 1.83
MCF2L2-210ENST00000478652 PAWRQ96IZ0 340 aaKnown RBP26.46■■□□□ 1.83
MCF2L2-210ENST00000478652 HMX1Q9NP08 348 aaPredicted RBP26.46■■□□□ 1.83
MCF2L2-210ENST00000478652 BTBD7Q9P203 1132 aa26.46■■□□□ 1.83
MCF2L2-210ENST00000478652 SPDYE16A6NNV3 312 aaPredicted RBP26.45■■□□□ 1.82
MCF2L2-210ENST00000478652 XRCC5P13010 732 aaKnown RBP26.45■■□□□ 1.82
MCF2L2-210ENST00000478652 UBE3CQ15386 1083 aa26.45■■□□□ 1.82
MCF2L2-210ENST00000478652 KIAA1755Q5JYT7 1200 aa26.45■■□□□ 1.82
MCF2L2-210ENST00000478652 CHRDL2Q6WN34 429 aa26.45■■□□□ 1.82
MCF2L2-210ENST00000478652 PLEKHH3Q7Z736 793 aa26.45■■□□□ 1.82
MCF2L2-210ENST00000478652 ZNF236Q9UL36 1845 aa26.44■■□□□ 1.82
MCF2L2-210ENST00000478652 PRKAR2AP13861 404 aaKnown RBP26.44■■□□□ 1.82
MCF2L2-210ENST00000478652 AKR1B1P15121 316 aa26.44■■□□□ 1.82
MCF2L2-210ENST00000478652 TSHZ3Q63HK5 1081 aa26.44■■□□□ 1.82
MCF2L2-210ENST00000478652 LBX2Q6XYB7 198 aa26.44■■□□□ 1.82
MCF2L2-210ENST00000478652 CCAR1Q8IX12 1150 aaKnown RBP26.44■■□□□ 1.82
MCF2L2-210ENST00000478652 PUS7LQ9H0K6 701 aaKnown RBP26.44■■□□□ 1.82
MCF2L2-210ENST00000478652 ATP8A2Q9NTI2 1148 aa26.44■■□□□ 1.82
MCF2L2-210ENST00000478652 SWAP70Q9UH65 585 aa26.44■■□□□ 1.82
MCF2L2-210ENST00000478652 MNX1P50219 401 aaPredicted RBP26.43■■□□□ 1.82
MCF2L2-210ENST00000478652 C12orf60Q5U649 245 aa26.43■■□□□ 1.82
MCF2L2-210ENST00000478652 TMEM179Q6ZVK1 233 aa26.43■■□□□ 1.82
MCF2L2-210ENST00000478652 DCTPP1Q9H773 170 aa26.43■■□□□ 1.82
MCF2L2-210ENST00000478652 MYH4Q9Y623 1939 aa26.43■■□□□ 1.82
MCF2L2-210ENST00000478652 USP17L12C9JPN9 530 aa26.42■■□□□ 1.82
MCF2L2-210ENST00000478652 USP17L21D6R901 530 aa26.42■■□□□ 1.82
MCF2L2-210ENST00000478652 ZKSCAN1P17029 563 aaPredicted RBP26.42■■□□□ 1.82
MCF2L2-210ENST00000478652 RGS2P41220 211 aa26.42■■□□□ 1.82
MCF2L2-210ENST00000478652 SIAH1Q8IUQ4 282 aa26.42■■□□□ 1.82
MCF2L2-210ENST00000478652 APBA2Q99767 749 aa26.42■■□□□ 1.82
MCF2L2-210ENST00000478652 ECHDC1Q9NTX5 307 aa26.42■■□□□ 1.82
MCF2L2-210ENST00000478652 CAPN2P17655 700 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms