RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 TMCO4Q5TGY1 634 aa8.24□□□□□ -1.09
HOXB3-209ENST00000478644 DHX32Q7L7V1 743 aaKnown RBP8.24□□□□□ -1.09
HOXB3-209ENST00000478644 C2CD5Q86YS7 1000 aa8.24□□□□□ -1.09
HOXB3-209ENST00000478644 CNBD1Q8NA66 436 aa8.24□□□□□ -1.09
HOXB3-209ENST00000478644 MASTLQ96GX5 879 aa8.24□□□□□ -1.09
HOXB3-209ENST00000478644 CHMP4AQ9BY43 222 aa8.24□□□□□ -1.09
HOXB3-209ENST00000478644 NYXQ9GZU5 481 aa8.24□□□□□ -1.09
HOXB3-209ENST00000478644 SAP130Q9H0E3 1048 aa8.24□□□□□ -1.09
HOXB3-209ENST00000478644 RNF181Q9P0P0 153 aa8.24□□□□□ -1.09
HOXB3-209ENST00000478644 KCNMB2Q9Y691 235 aa8.24□□□□□ -1.09
HOXB3-209ENST00000478644 N4BP2Q86UW6 1770 aaPredicted RBP8.24□□□□□ -1.09
HOXB3-209ENST00000478644 LTBP3Q9NS15 1303 aa8.24□□□□□ -1.09
HOXB3-209ENST00000478644 MAPK8IP3Q9UPT6 1336 aa8.24□□□□□ -1.09
HOXB3-209ENST00000478644 BRCA1P38398 1863 aaKnown RBP8.23□□□□□ -1.09
HOXB3-209ENST00000478644 KIAA1551Q9HCM1 1747 aa8.23□□□□□ -1.09
HOXB3-209ENST00000478644 GLTPD2A6NH11 291 aa8.23□□□□□ -1.09
HOXB3-209ENST00000478644 ERVV-1B6SEH8 477 aa8.23□□□□□ -1.09
HOXB3-209ENST00000478644 IGSF3O75054 1194 aa8.23□□□□□ -1.09
HOXB3-209ENST00000478644 HMGB1P09429 215 aaKnown RBP8.23□□□□□ -1.09
HOXB3-209ENST00000478644 GPLD1P80108 840 aa8.23□□□□□ -1.09
HOXB3-209ENST00000478644 PSAPL1Q6NUJ1 521 aa8.23□□□□□ -1.09
HOXB3-209ENST00000478644 SMC1BQ8NDV3 1235 aa8.23□□□□□ -1.09
HOXB3-209ENST00000478644 ZNF526Q8TF50 670 aaPredicted RBP8.23□□□□□ -1.09
HOXB3-209ENST00000478644 PHACTR3Q96KR7 559 aa8.23□□□□□ -1.09
HOXB3-209ENST00000478644 IGFLR1Q9H665 355 aa8.23□□□□□ -1.09
HOXB3-209ENST00000478644 VIRMAQ69YN4 1812 aaKnown RBP8.23□□□□□ -1.09
HOXB3-209ENST00000478644 TNFRSF10BO14763 440 aa8.22□□□□□ -1.09
HOXB3-209ENST00000478644 SASH3O75995 380 aa8.22□□□□□ -1.09
HOXB3-209ENST00000478644 CAMTA2O94983 1202 aa8.22□□□□□ -1.09
HOXB3-209ENST00000478644 HOXD8P13378 290 aaPredicted RBP8.22□□□□□ -1.09
HOXB3-209ENST00000478644 CHRNA5P30532 468 aa8.22□□□□□ -1.09
HOXB3-209ENST00000478644 NRLP54845 237 aa8.22□□□□□ -1.09
HOXB3-209ENST00000478644 GRIK5Q16478 980 aa8.22□□□□□ -1.09
HOXB3-209ENST00000478644 TBC1D9BQ66K14 1250 aa8.22□□□□□ -1.09
HOXB3-209ENST00000478644 NBPF5PQ86XG9 351 aaPredicted RBP8.22□□□□□ -1.09
HOXB3-209ENST00000478644 ETFBKMTQ8IXQ9 262 aa8.22□□□□□ -1.09
HOXB3-209ENST00000478644 RTKN2Q8IZC4 609 aa8.22□□□□□ -1.09
HOXB3-209ENST00000478644 ZNF622Q969S3 477 aaKnown RBP eCLIP8.22□□□□□ -1.09
HOXB3-209ENST00000478644 NACC1Q96RE7 527 aa8.22□□□□□ -1.09
HOXB3-209ENST00000478644 JPH1Q9HDC5 661 aaPredicted RBP8.22□□□□□ -1.09
HOXB3-209ENST00000478644 TLR7Q9NYK1 1049 aaKnown RBP8.22□□□□□ -1.09
HOXB3-209ENST00000478644 SIPA1L3O60292 1781 aaPredicted RBP8.22□□□□□ -1.09
HOXB3-209ENST00000478644 KLRG2A4D1S0 409 aaPredicted RBP8.21□□□□□ -1.1
HOXB3-209ENST00000478644 IQCA1LA6NCM1 817 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 K7ELQ4 463 aaPredicted RBP8.21□□□□□ -1.1
HOXB3-209ENST00000478644 RGS9O75916 674 aaPredicted RBP8.21□□□□□ -1.1
HOXB3-209ENST00000478644 A1BGP04217 495 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 RARAP10276 462 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 NPR1P16066 1061 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 GATA4P43694 442 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 TBC1D8BQ0IIM8 1120 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 NFE2L2Q16236 605 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 PRR5LQ6MZQ0 368 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 CAPN12Q6ZSI9 719 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 LPIN3Q9BQK8 851 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 TMX4Q9H1E5 349 aaPredicted RBP8.21□□□□□ -1.1
HOXB3-209ENST00000478644 VPS33BQ9H267 617 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 PRKRIP1Q9H875 184 aaPredicted RBP8.21□□□□□ -1.1
HOXB3-209ENST00000478644 USP16Q9Y5T5 823 aa8.21□□□□□ -1.1
HOXB3-209ENST00000478644 MYBBP1AQ9BQG0 1328 aaKnown RBP8.21□□□□□ -1.1
HOXB3-209ENST00000478644 A0A0A0MRY4 1105 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 XYLBO75191 536 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 SRGNP10124 158 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 ARID4AP29374 1257 aaPredicted RBP8.2□□□□□ -1.1
HOXB3-209ENST00000478644 SOX18P35713 384 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 FAM26DQ5JW98 314 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 KIF6Q6ZMV9 814 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 MCM10Q7L590 875 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 FAM35AQ86V20 835 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 NUDT8Q8WV74 236 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 TAOK3Q9H2K8 898 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 WWC3Q9ULE0 1092 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 RNF123Q5XPI4 1314 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 TNRC6CQ9HCJ0 1690 aaKnown RBP8.2□□□□□ -1.1
HOXB3-209ENST00000478644 DLEC1Q9Y238 1755 aa8.2□□□□□ -1.1
HOXB3-209ENST00000478644 C9orf172C9J069 976 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 FURINP09958 794 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 ELNP15502 786 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 PARP10Q53GL7 1025 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 CCDC93Q567U6 631 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 HSP90AB3PQ58FF7 597 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 PERM1Q5SV97 790 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 KRT25Q7Z3Z0 450 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 PPP1R42Q7Z4L9 355 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 RGL4Q8IZJ4 473 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 CMTR1Q8N1G2 835 aaKnown RBP8.19□□□□□ -1.1
HOXB3-209ENST00000478644 PLEKHF1Q96S99 279 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 FAM13BQ9NYF5 915 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 MTMR7Q9Y216 660 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 NIP7Q9Y221 180 aaKnown RBP eCLIP8.19□□□□□ -1.1
HOXB3-209ENST00000478644 USP20Q9Y2K6 914 aa8.19□□□□□ -1.1
HOXB3-209ENST00000478644 AFDNP55196 1824 aaKnown RBP8.19□□□□□ -1.1
HOXB3-209ENST00000478644 IBTKQ9P2D0 1353 aaPredicted RBP8.19□□□□□ -1.1
HOXB3-209ENST00000478644 SCN7AQ01118 1682 aa8.18□□□□□ -1.1
HOXB3-209ENST00000478644 FAM229AH3BQW9 127 aa8.18□□□□□ -1.1
HOXB3-209ENST00000478644 HSP90B1P14625 803 aaKnown RBP8.18□□□□□ -1.1
HOXB3-209ENST00000478644 MFAP1P55081 439 aaKnown RBP8.18□□□□□ -1.1
HOXB3-209ENST00000478644 GRIK4Q16099 956 aa8.18□□□□□ -1.1
HOXB3-209ENST00000478644 DTWD1Q8N5C7 304 aa8.18□□□□□ -1.1
HOXB3-209ENST00000478644 NMRK2Q9NPI5 230 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms