RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 SLC7A5Q01650 507 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 TRDNQ13061 729 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 WLSQ5T9L3 541 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 CDKAL1Q5VV42 579 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 IQCA1Q86XH1 822 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 CCDC13Q8IYE1 715 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 OSBP2Q969R2 916 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 TARSL2A2RTX5 802 aaKnown RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 RCCD1A6NED2 376 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 PSMD14O00487 310 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 HOXB7P09629 217 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 RDXP35241 583 aaKnown RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 NAP1L1P55209 391 aaKnown RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 CUL4BQ13620 913 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 RNF187Q5TA31 235 aaPredicted RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 NBPF14Q5TI25 921 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 NAA35Q5VZE5 725 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 CEP57Q86XR8 500 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 TMTC1Q8IUR5 882 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 CNGA4Q8IV77 575 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 MB21D2Q8IYB1 491 aaPredicted RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 ANKRD24Q8TF21 1146 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 JAKMIP2Q96AA8 810 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 AIDAQ96BJ3 306 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 RNPC3Q96LT9 517 aaKnown RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 PAG1Q9NWQ8 432 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 MYO1AQ9UBC5 1043 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 DUSP10Q9Y6W6 482 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 C4AP0C0L4 1744 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 C4BP0C0L5 1744 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 A0A087X0B3 334 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 ACTN4O43707 911 aaKnown RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 KIAA0754O94854 1291 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 KRT14P02533 472 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 GCFC2P16383 781 aaKnown RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 AFMP43652 599 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 TIMM10P62072 90 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 CCDC40Q4G0X9 1142 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 SPATA1Q5VX52 437 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 KRI1Q8N9T8 703 aaKnown RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 NUP88Q99567 741 aaPredicted RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 VPS16Q9H269 839 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 SLC40A1Q9NP59 571 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 HELLSQ9NRZ9 838 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 SMARCAL1Q9NZC9 954 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 EPN1Q9Y6I3 576 aaPredicted RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 SETD1BQ9UPS6 1966 aaKnown RBP11.08□□□□□ -0.64
COL13A1-207ENST00000478219 KDM3BQ7LBC6 1761 aa11.08□□□□□ -0.64
COL13A1-207ENST00000478219 RFX7Q2KHR2 1363 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 SYNRGQ9UMZ2 1314 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 NDUFA10O95299 355 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 KRT9P35527 623 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 SKOR1P84550 965 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 HDLBPQ00341 1268 aaKnown RBP11.07□□□□□ -0.64
COL13A1-207ENST00000478219 SF3B2Q13435 895 aaKnown RBP11.07□□□□□ -0.64
COL13A1-207ENST00000478219 PAPD7Q5XG87 772 aaKnown RBP11.07□□□□□ -0.64
COL13A1-207ENST00000478219 CYP26C1Q6V0L0 522 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 FBXL16Q8N461 479 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 NEUROD6Q96NK8 337 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 LRRC1Q9BTT6 524 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 LACRTQ9GZZ8 138 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 VCPKMTQ9H867 229 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 COPRSQ9NQ92 184 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 FBXO2Q9UK22 296 aaPredicted RBP11.07□□□□□ -0.64
COL13A1-207ENST00000478219 FAM184BQ9ULE4 1060 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 RANBP6O60518 1105 aaKnown RBP11.07□□□□□ -0.64
COL13A1-207ENST00000478219 RTN2O75298 545 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 ERCC5P28715 1186 aaPredicted RBP11.07□□□□□ -0.64
COL13A1-207ENST00000478219 LSP1P33241 339 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 PDE6BP35913 854 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 CCNHP51946 323 aaPredicted RBP11.07□□□□□ -0.64
COL13A1-207ENST00000478219 IFT88Q13099 833 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 KRT31Q15323 416 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 E2F5Q15329 346 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 CEP85LQ5SZL2 805 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 B4GALNT4Q76KP1 1039 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 SPATA20Q8TB22 786 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
COL13A1-207ENST00000478219 KDM6AO15550 1401 aaPredicted RBP11.06□□□□□ -0.64
COL13A1-207ENST00000478219 ANKARQ7Z5J8 1434 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 NEURL1BA8MQ27 555 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 FGAP02671 866 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 SMTNP53814 917 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 TBC1D8BQ0IIM8 1120 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 BIRC2Q13490 618 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 TEX11Q8IYF3 940 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 ZNF473Q8WTR7 871 aaKnown RBP11.06□□□□□ -0.64
COL13A1-207ENST00000478219 STAMQ92783 540 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 EHD2Q9NZN4 543 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 DACH1Q9UI36 760 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 ATXN2Q99700 1313 aaKnown RBP11.06□□□□□ -0.64
COL13A1-207ENST00000478219 BTBD18B2RXH4 712 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 MCM3P25205 808 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 PIP4K2AP48426 406 aaPredicted RBP11.06□□□□□ -0.64
COL13A1-207ENST00000478219 GCKRQ14397 625 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 PDIA6Q15084 440 aa11.06□□□□□ -0.64
COL13A1-207ENST00000478219 CCDC122Q5T0U0 273 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms