RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 CERKQ8TCT0 537 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 CACTINQ8WUQ7 758 aaKnown RBP10.21□□□□□ -0.78
CDHR3-211ENST00000478080 POLLQ9UGP5 575 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 UBR3Q6ZT12 1888 aa10.21□□□□□ -0.78
CDHR3-211ENST00000478080 ADRA2BP18089 450 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 ST5P78524 1137 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 OLFM4Q6UX06 510 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 CNNM3Q8NE01 707 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 NAT10Q9H0A0 1025 aaKnown RBP10.2□□□□□ -0.78
CDHR3-211ENST00000478080 CNTNAP5Q8WYK1 1306 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 FAM237AA0A1B0GTK4 181 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 POLR2DO15514 142 aaKnown RBP10.2□□□□□ -0.78
CDHR3-211ENST00000478080 RRP9O43818 475 aaKnown RBP10.2□□□□□ -0.78
CDHR3-211ENST00000478080 PCP11498 1178 aaKnown RBP10.2□□□□□ -0.78
CDHR3-211ENST00000478080 PTPREP23469 700 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 NPY5RQ15761 445 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 KRBA2Q6ZNG9 492 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 RASGRP2Q7LDG7 609 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.2□□□□□ -0.78
CDHR3-211ENST00000478080 FILIP1Q7Z7B0 1213 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 STAG2Q8N3U4 1231 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 CTCFLQ8NI51 663 aaPredicted RBP10.2□□□□□ -0.78
CDHR3-211ENST00000478080 TIGD1Q96MW7 591 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 CSRNP2Q9H175 543 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 SPTLC3Q9NUV7 552 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 RBM28Q9NW13 759 aaKnown RBP10.2□□□□□ -0.78
CDHR3-211ENST00000478080 GGA1Q9UJY5 639 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 LAMB1P07942 1786 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 DDAH1O94760 285 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 TPM3P06753 285 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 PRR29P0C7W0 189 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 KRT2P35908 639 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 RBM6P78332 1123 aaKnown RBP10.2□□□□□ -0.78
CDHR3-211ENST00000478080 NCAPHQ15003 741 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 PPP2R5BQ15173 497 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 RBM17Q96I25 401 aaKnown RBP10.2□□□□□ -0.78
CDHR3-211ENST00000478080 RTFDC1Q9BY42 306 aaPredicted RBP10.2□□□□□ -0.78
CDHR3-211ENST00000478080 SERTAD1Q9UHV2 236 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 TUBE1Q9UJT0 475 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 PCDHA5Q9Y5H7 936 aa10.2□□□□□ -0.78
CDHR3-211ENST00000478080 MAST2Q6P0Q8 1798 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 DLEC1Q9Y238 1755 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 C6orf229H3BNL8 230 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 POLRMTO00411 1230 aaKnown RBP10.19□□□□□ -0.78
CDHR3-211ENST00000478080 RIMBP2O15034 1052 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 CALM1P0DP23 149 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 CALM2P0DP24 149 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 CALM3P0DP25 149 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 BMP6P22004 513 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 LMOD1P29536 600 aaPredicted RBP10.19□□□□□ -0.78
CDHR3-211ENST00000478080 BTDP43251 543 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 ZNF174Q15697 407 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 KRT27Q7Z3Y8 459 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 MRFAP1L1Q96HT8 127 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 MKNK2Q9HBH9 465 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 UQCRHLA0A096LP55 91 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 UQCRHP07919 91 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 ATP1A3P13637 1013 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 XBP1P17861 261 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 GLIPR1L2Q4G1C9 344 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 TBC1D16Q8TBP0 767 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 GPKOWQ92917 476 aaPredicted RBP eCLIP10.19□□□□□ -0.78
CDHR3-211ENST00000478080 EPSTI1Q96J88 318 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 IFNKQ9P0W0 207 aa10.19□□□□□ -0.78
CDHR3-211ENST00000478080 A0A087X0B3 334 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 SMC2O95347 1197 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 BAG3O95817 575 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 ATP2B4P23634 1241 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 CDC25BP30305 580 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 MDM2Q00987 491 aaPredicted RBP10.18□□□□□ -0.78
CDHR3-211ENST00000478080 PTPN21Q16825 1174 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 TXNRD1Q16881 649 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 ZNF827Q17R98 1081 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 MFSD14BQ5SR56 506 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 XPO4Q9C0E2 1151 aaKnown RBP10.18□□□□□ -0.78
CDHR3-211ENST00000478080 HSD3B7Q9H2F3 369 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 KAT14Q9H8E8 782 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 SRPRBQ9Y5M8 271 aaKnown RBP10.18□□□□□ -0.78
CDHR3-211ENST00000478080 TRIM75PA6NK02 468 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 SCG2P13521 617 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 GSTO1P78417 241 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 SLC35G1Q2M3R5 365 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 HSP90AA4PQ58FG1 418 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 PIK3AP1Q6ZUJ8 805 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 LRRC8AQ8IWT6 810 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 PNMA1Q8ND90 353 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 TNFRSF25Q93038 417 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 BPIFA3Q9BQP9 254 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 CPVLQ9H3G5 476 aa10.18□□□□□ -0.78
CDHR3-211ENST00000478080 BRWD3Q6RI45 1802 aa10.17□□□□□ -0.78
CDHR3-211ENST00000478080 F8W031 263 aaPredicted RBP10.17□□□□□ -0.78
CDHR3-211ENST00000478080 TPM2P07951 284 aa10.17□□□□□ -0.78
CDHR3-211ENST00000478080 GOLGA8HP0CJ92 632 aa10.17□□□□□ -0.78
CDHR3-211ENST00000478080 TSPY3P0CV98 308 aa10.17□□□□□ -0.78
CDHR3-211ENST00000478080 TSPY8P0CW00 308 aa10.17□□□□□ -0.78
CDHR3-211ENST00000478080 IL1R1P14778 569 aa10.17□□□□□ -0.78
CDHR3-211ENST00000478080 CASP1P29466 404 aa10.17□□□□□ -0.78
CDHR3-211ENST00000478080 NLRP5P59047 1200 aa10.17□□□□□ -0.78
CDHR3-211ENST00000478080 PPP4CP60510 307 aa10.17□□□□□ -0.78
CDHR3-211ENST00000478080 SLC27A3Q5K4L6 730 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms