RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CASZ1Q86V15 1759 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 PI4KAP2A4QPH2 592 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 CARNS1A5YM72 827 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 EML1O00423 815 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 SRGAP3O43295 1099 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 DDX58O95786 925 aaKnown RBP5.94□□□□□ -1.46
SF3B6-202ENST00000478050 LMOD1P29536 600 aaPredicted RBP5.94□□□□□ -1.46
SF3B6-202ENST00000478050 NEK4P51957 841 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 ZNF445P59923 1031 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 KSR2Q6VAB6 950 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 MPRIPQ6WCQ1 1025 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 KRT28Q7Z3Y7 464 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 PI4KAP1Q8N8J0 262 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 PI4K2BQ8TCG2 481 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 ZDHHC1Q8WTX9 485 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 NUDT8Q8WV74 236 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 BHMTQ93088 406 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 GPATCH3Q96I76 525 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 TMX3Q96JJ7 454 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 PPP1R12CQ9BZL4 782 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 UBE2OQ9C0C9 1292 aaKnown RBP5.94□□□□□ -1.46
SF3B6-202ENST00000478050 IL1RAPL2Q9NP60 686 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 BRD7Q9NPI1 651 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 ANO2Q9NQ90 1003 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 HYPKQ9NX55 129 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 STK32BQ9NY57 414 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 ANKIB1Q9P2G1 1089 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 KCNH4Q9UQ05 1017 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 MRC1P22897 1456 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 RAD50Q92878 1312 aa5.94□□□□□ -1.46
SF3B6-202ENST00000478050 SERTM1A2A2V5 107 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 PALM3A6NDB9 673 aaPredicted RBP5.93□□□□□ -1.46
SF3B6-202ENST00000478050 SGSM2O43147 1006 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 KCNQ3O43525 872 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 GLRX3O76003 335 aaKnown RBP5.93□□□□□ -1.46
SF3B6-202ENST00000478050 MBD3O95983 291 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 NBPF7P0C2Y1 421 aaPredicted RBP5.93□□□□□ -1.46
SF3B6-202ENST00000478050 HSPA4P34932 840 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 OS9Q13438 667 aaPredicted RBP5.93□□□□□ -1.46
SF3B6-202ENST00000478050 TSHZ3Q63HK5 1081 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 DMRTC2Q8IXT2 367 aaPredicted RBP5.93□□□□□ -1.46
SF3B6-202ENST00000478050 ZGPATQ8N5A5 531 aaKnown RBP5.93□□□□□ -1.46
SF3B6-202ENST00000478050 RUFY2Q8WXA3 655 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 PANK2Q9BZ23 570 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 PDGFDQ9GZP0 370 aaPredicted RBP5.93□□□□□ -1.46
SF3B6-202ENST00000478050 DDX21Q9NR30 783 aaKnown RBP eCLIP5.93□□□□□ -1.46
SF3B6-202ENST00000478050 LMBRD1Q9NUN5 540 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 C9orf78Q9NZ63 289 aaPredicted RBP5.93□□□□□ -1.46
SF3B6-202ENST00000478050 MTMR7Q9Y216 660 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 MAP3K2Q9Y2U5 619 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 NWD2Q9ULI1 1742 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 UTYO14607 1347 aa5.93□□□□□ -1.46
SF3B6-202ENST00000478050 SFI1A8K8P3 1242 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 HIP1O00291 1037 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 BRD1O95696 1058 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 HTRA3P83110 453 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 XPCQ01831 940 aaPredicted RBP5.92□□□□□ -1.46
SF3B6-202ENST00000478050 CCDC173Q0VFZ6 552 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 SEMA3FQ13275 785 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 KIAA1211Q6ZU35 1233 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 FMR1NBQ8N0W7 255 aaPredicted RBP5.92□□□□□ -1.46
SF3B6-202ENST00000478050 CLASRPQ8N2M8 674 aaKnown RBP5.92□□□□□ -1.46
SF3B6-202ENST00000478050 LINS1Q8NG48 757 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 ANP32BQ92688 251 aaKnown RBP5.92□□□□□ -1.46
SF3B6-202ENST00000478050 SSBP4Q9BWG4 385 aaPredicted RBP5.92□□□□□ -1.46
SF3B6-202ENST00000478050 PALD1Q9ULE6 856 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 SLC6A14Q9UN76 642 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 USTQ9Y2C2 406 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 ZDHHC9Q9Y397 364 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 PCDHGA11Q9Y5H2 935 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 UBR2Q8IWV8 1755 aa5.92□□□□□ -1.46
SF3B6-202ENST00000478050 KDM6AO15550 1401 aaPredicted RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 PATL2C9JE40 543 aaKnown RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 GRM8O00222 908 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 RGS9O75916 674 aaPredicted RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 ANXA1P04083 346 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 IFIT2P09913 472 aaKnown RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 POLD1P28340 1107 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 IREB2P48200 963 aaKnown RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 IRAK1P51617 712 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 TBCELQ5QJ74 424 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 PSAPL1Q6NUJ1 521 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 LARP1Q6PKG0 1096 aaKnown RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 GAS2L3Q86XJ1 694 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 SLC9A9Q8IVB4 645 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 RGS22Q8NE09 1264 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 WFDC12Q8WWY7 111 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 FOXD4L4Q8WXT5 416 aaPredicted RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 RAPGEF4Q8WZA2 1011 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 TRIM44Q96DX7 344 aaPredicted RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 PPP1R9BQ96SB3 815 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 LSG1Q9H089 658 aaKnown RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 ALG2Q9H553 416 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 RRAGDQ9NQL2 400 aaPredicted RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 DIAPH3Q9NSV4 1193 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 ECHDC1Q9NTX5 307 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 TFIP11Q9UBB9 837 aaKnown RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 SPG7Q9UQ90 795 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 CHMP3Q9Y3E7 222 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms