RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 SLC6A17Q9H1V8 727 aa6.96□□□□□ -1.3
NCKAP1-204ENST00000477988 ZNF552Q9H707 407 aaPredicted RBP6.96□□□□□ -1.3
NCKAP1-204ENST00000477988 C1orf115Q9H7X2 142 aa6.96□□□□□ -1.3
NCKAP1-204ENST00000477988 OTOL1A6NHN0 477 aaPredicted RBP6.95□□□□□ -1.3
NCKAP1-204ENST00000477988 GIPC1O14908 333 aa6.95□□□□□ -1.3
NCKAP1-204ENST00000477988 TNK2Q07912 1038 aa6.95□□□□□ -1.3
NCKAP1-204ENST00000477988 LETMD1Q6P1Q0 360 aa6.95□□□□□ -1.3
NCKAP1-204ENST00000477988 ZNF605Q86T29 641 aa6.95□□□□□ -1.3
NCKAP1-204ENST00000477988 LILRA2Q8N149 483 aa6.95□□□□□ -1.3
NCKAP1-204ENST00000477988 FBF1Q8TES7 1133 aa6.95□□□□□ -1.3
NCKAP1-204ENST00000477988 FBRSQ9HAH7 460 aa6.95□□□□□ -1.3
NCKAP1-204ENST00000477988 DCTN4Q9UJW0 460 aa6.95□□□□□ -1.3
NCKAP1-204ENST00000477988 SNCAIPQ9Y6H5 919 aa6.95□□□□□ -1.3
NCKAP1-204ENST00000477988 PRAMEF27A3QJZ7 478 aa6.94□□□□□ -1.3
NCKAP1-204ENST00000477988 RBAK-RBAKDNI3L0D1 243 aa6.94□□□□□ -1.3
NCKAP1-204ENST00000477988 CBX7O95931 251 aa6.94□□□□□ -1.3
NCKAP1-204ENST00000477988 INPP5AQ14642 412 aa6.94□□□□□ -1.3
NCKAP1-204ENST00000477988 RASIP1Q5U651 963 aa6.94□□□□□ -1.3
NCKAP1-204ENST00000477988 LRFN4Q6PJG9 635 aa6.94□□□□□ -1.3
NCKAP1-204ENST00000477988 HID1Q8IV36 788 aa6.94□□□□□ -1.3
NCKAP1-204ENST00000477988 PDZD8Q8NEN9 1154 aa6.94□□□□□ -1.3
NCKAP1-204ENST00000477988 RFXAPO00287 272 aa6.93□□□□□ -1.3
NCKAP1-204ENST00000477988 TREHO43280 583 aa6.93□□□□□ -1.3
NCKAP1-204ENST00000477988 SASH1O94885 1247 aa6.93□□□□□ -1.3
NCKAP1-204ENST00000477988 SSPNQ14714 243 aa6.93□□□□□ -1.3
NCKAP1-204ENST00000477988 PIWIL2Q8TC59 973 aaKnown RBP6.93□□□□□ -1.3
NCKAP1-204ENST00000477988 SGPP1Q9BX95 441 aa6.93□□□□□ -1.3
NCKAP1-204ENST00000477988 C19orf44Q9H6X5 657 aa6.93□□□□□ -1.3
NCKAP1-204ENST00000477988 SOWAHDA6NJG2 315 aa6.92□□□□□ -1.3
NCKAP1-204ENST00000477988 CST3P01034 146 aaPredicted RBP6.92□□□□□ -1.3
NCKAP1-204ENST00000477988 PDE4CQ08493 712 aa6.92□□□□□ -1.3
NCKAP1-204ENST00000477988 NKG7Q16617 165 aa6.92□□□□□ -1.3
NCKAP1-204ENST00000477988 ZXDCQ2QGD7 858 aaPredicted RBP6.92□□□□□ -1.3
NCKAP1-204ENST00000477988 PCNX4Q63HM2 1172 aa6.92□□□□□ -1.3
NCKAP1-204ENST00000477988 PLPPR2Q96GM1 343 aa6.92□□□□□ -1.3
NCKAP1-204ENST00000477988 INTS4Q96HW7 963 aaKnown RBP6.92□□□□□ -1.3
NCKAP1-204ENST00000477988 CWC22Q9HCG8 908 aaKnown RBP6.92□□□□□ -1.3
NCKAP1-204ENST00000477988 PSPNO60542 156 aa6.91□□□□□ -1.3
NCKAP1-204ENST00000477988 FBXO24O75426 580 aa6.91□□□□□ -1.3
NCKAP1-204ENST00000477988 ETF1P62495 437 aaKnown RBP6.91□□□□□ -1.3
NCKAP1-204ENST00000477988 NR0B2Q15466 257 aa6.91□□□□□ -1.3
NCKAP1-204ENST00000477988 TIGD5Q53EQ6 642 aa6.91□□□□□ -1.3
NCKAP1-204ENST00000477988 TMEM132EQ6IEE7 984 aa6.91□□□□□ -1.3
NCKAP1-204ENST00000477988 YBX2Q9Y2T7 364 aaKnown RBP6.91□□□□□ -1.3
NCKAP1-204ENST00000477988 TACC3Q9Y6A5 838 aa6.91□□□□□ -1.3
NCKAP1-204ENST00000477988 WASH4PA8MWX3 477 aa6.9□□□□□ -1.3
NCKAP1-204ENST00000477988 ZGLP1P0C6A0 271 aa6.9□□□□□ -1.3
NCKAP1-204ENST00000477988 EFEMP1Q12805 493 aa6.9□□□□□ -1.3
NCKAP1-204ENST00000477988 GAB4Q2WGN9 574 aa6.9□□□□□ -1.3
NCKAP1-204ENST00000477988 ERICH6BQ5W0A0 696 aa6.9□□□□□ -1.3
NCKAP1-204ENST00000477988 CREG2Q8IUH2 290 aa6.9□□□□□ -1.3
NCKAP1-204ENST00000477988 DACT3Q96B18 629 aaPredicted RBP6.9□□□□□ -1.3
NCKAP1-204ENST00000477988 OSBPL7Q9BZF2 842 aa6.9□□□□□ -1.3
NCKAP1-204ENST00000477988 PTPN11Q06124 597 aaPredicted RBP6.89□□□□□ -1.31
NCKAP1-204ENST00000477988 PRAMEF13Q5VWM6 474 aa6.89□□□□□ -1.31
NCKAP1-204ENST00000477988 PANK1Q8TE04 598 aa6.89□□□□□ -1.31
NCKAP1-204ENST00000477988 FITM1A5D6W6 292 aa6.88□□□□□ -1.31
NCKAP1-204ENST00000477988 CELA3AP09093 270 aa6.88□□□□□ -1.31
NCKAP1-204ENST00000477988 PI3P19957 117 aa6.88□□□□□ -1.31
NCKAP1-204ENST00000477988 ALG1LQ6GMV1 187 aa6.88□□□□□ -1.31
NCKAP1-204ENST00000477988 SV2BQ7L1I2 683 aa6.88□□□□□ -1.31
NCKAP1-204ENST00000477988 OXR1Q8N573 874 aa6.88□□□□□ -1.31
NCKAP1-204ENST00000477988 FEZF2Q8TBJ5 459 aa6.88□□□□□ -1.31
NCKAP1-204ENST00000477988 GAL3ST3Q96A11 431 aa6.88□□□□□ -1.31
NCKAP1-204ENST00000477988 DUSP15Q9H1R2 295 aaPredicted RBP6.88□□□□□ -1.31
NCKAP1-204ENST00000477988 ETV3P41162 512 aa6.87□□□□□ -1.31
NCKAP1-204ENST00000477988 SPATS1Q496A3 300 aa6.87□□□□□ -1.31
NCKAP1-204ENST00000477988 WIPI1Q5MNZ9 446 aaPredicted RBP6.87□□□□□ -1.31
NCKAP1-204ENST00000477988 TRIT1Q9H3H1 467 aaKnown RBP6.87□□□□□ -1.31
NCKAP1-204ENST00000477988 FAM8A1Q9UBU6 413 aa6.87□□□□□ -1.31
NCKAP1-204ENST00000477988 BIN2Q9UBW5 565 aaPredicted RBP6.87□□□□□ -1.31
NCKAP1-204ENST00000477988 SLC22A31A6NKX4 558 aa6.86□□□□□ -1.31
NCKAP1-204ENST00000477988 MAPK1P28482 360 aa6.86□□□□□ -1.31
NCKAP1-204ENST00000477988 TPP2P29144 1249 aaPredicted RBP6.86□□□□□ -1.31
NCKAP1-204ENST00000477988 GRK4P32298 578 aa6.86□□□□□ -1.31
NCKAP1-204ENST00000477988 CDH24Q86UP0 819 aa6.86□□□□□ -1.31
NCKAP1-204ENST00000477988 MRPL41Q8IXM3 137 aaKnown RBP6.86□□□□□ -1.31
NCKAP1-204ENST00000477988 SIGLEC10Q96LC7 697 aa6.86□□□□□ -1.31
NCKAP1-204ENST00000477988 SPG7Q9UQ90 795 aa6.86□□□□□ -1.31
NCKAP1-204ENST00000477988 AFF3P51826 1226 aaKnown RBP6.85□□□□□ -1.31
NCKAP1-204ENST00000477988 RPS26P62854 115 aaKnown RBP6.85□□□□□ -1.31
NCKAP1-204ENST00000477988 SNX17Q15036 470 aa6.85□□□□□ -1.31
NCKAP1-204ENST00000477988 SLC6A19Q695T7 634 aa6.85□□□□□ -1.31
NCKAP1-204ENST00000477988 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.85□□□□□ -1.31
NCKAP1-204ENST00000477988 XAGE3Q8WTP9 111 aa6.85□□□□□ -1.31
NCKAP1-204ENST00000477988 SHISA4Q96DD7 197 aa6.85□□□□□ -1.31
NCKAP1-204ENST00000477988 Q96M66 194 aa6.85□□□□□ -1.31
NCKAP1-204ENST00000477988 TEPSINQ96N21 525 aa6.85□□□□□ -1.31
NCKAP1-204ENST00000477988 C12orf49Q9H741 205 aa6.85□□□□□ -1.31
NCKAP1-204ENST00000477988 GNEQ9Y223 722 aaKnown RBP6.85□□□□□ -1.31
NCKAP1-204ENST00000477988 GFRA2O00451 464 aa6.84□□□□□ -1.31
NCKAP1-204ENST00000477988 PDE6BP35913 854 aa6.84□□□□□ -1.31
NCKAP1-204ENST00000477988 FMR1Q06787 632 aaKnown RBP eCLIP6.84□□□□□ -1.31
NCKAP1-204ENST00000477988 KRTAP1-1Q07627 177 aa6.84□□□□□ -1.31
NCKAP1-204ENST00000477988 TTBK2Q6IQ55 1244 aa6.84□□□□□ -1.31
NCKAP1-204ENST00000477988 EPB41L4AQ9HCS5 686 aaPredicted RBP6.84□□□□□ -1.31
NCKAP1-204ENST00000477988 MBD1Q9UIS9 605 aaPredicted RBP6.84□□□□□ -1.31
NCKAP1-204ENST00000477988 IRAK3Q9Y616 596 aa6.84□□□□□ -1.31
NCKAP1-204ENST00000477988 MAPK8P45983 427 aa6.83□□□□□ -1.32
NCKAP1-204ENST00000477988 EGR3Q06889 387 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms