RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 USP17L10C9JJH3 530 aa12.07□□□□□ -0.48
SMARCB1-206ENST00000477836 CNMDO75829 334 aa12.07□□□□□ -0.48
SMARCB1-206ENST00000477836 MYO9BQ13459 2157 aa12.07□□□□□ -0.48
SMARCB1-206ENST00000477836 LRRC41Q15345 812 aa12.07□□□□□ -0.48
SMARCB1-206ENST00000477836 AAK1Q2M2I8 961 aa12.07□□□□□ -0.48
SMARCB1-206ENST00000477836 ZGPATQ8N5A5 531 aaKnown RBP12.07□□□□□ -0.48
SMARCB1-206ENST00000477836 ANKRD44Q8N8A2 993 aa12.07□□□□□ -0.48
SMARCB1-206ENST00000477836 ABCF2Q9UG63 623 aa12.07□□□□□ -0.48
SMARCB1-206ENST00000477836 RABGAP1Q9Y3P9 1069 aa12.07□□□□□ -0.48
SMARCB1-206ENST00000477836 MROH7-TTC4A0A0A0MT08 1334 aa12.07□□□□□ -0.48
SMARCB1-206ENST00000477836 MUC6Q6W4X9 2439 aa12.06□□□□□ -0.48
SMARCB1-206ENST00000477836 SEPT4O43236 478 aa12.06□□□□□ -0.48
SMARCB1-206ENST00000477836 GPR37L1O60883 481 aa12.06□□□□□ -0.48
SMARCB1-206ENST00000477836 VAMP4O75379 141 aa12.06□□□□□ -0.48
SMARCB1-206ENST00000477836 CENPBP07199 599 aaPredicted RBP12.06□□□□□ -0.48
SMARCB1-206ENST00000477836 ASNSP08243 561 aa12.06□□□□□ -0.48
SMARCB1-206ENST00000477836 MRE11P49959 708 aa12.06□□□□□ -0.48
SMARCB1-206ENST00000477836 RHBDL3P58872 404 aa12.06□□□□□ -0.48
SMARCB1-206ENST00000477836 GRB14Q14449 540 aa12.06□□□□□ -0.48
SMARCB1-206ENST00000477836 SKIV2LQ15477 1246 aaKnown RBP12.06□□□□□ -0.48
SMARCB1-206ENST00000477836 FAM163AQ96GL9 167 aaPredicted RBP12.06□□□□□ -0.48
SMARCB1-206ENST00000477836 SEMA3EO15041 775 aa12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 PHKA1P46020 1223 aa12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 JAG1P78504 1218 aa12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 DPP9Q86TI2 863 aa12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 SLC44A5Q8NCS7 719 aa12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 C11orf16Q9NQ32 467 aa12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 EMILIN3Q9NT22 766 aa12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 HERC5Q9UII4 1024 aaKnown RBP12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 MSRAQ9UJ68 235 aa12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 ZBED9Q6R2W3 1325 aa12.05□□□□□ -0.48
SMARCB1-206ENST00000477836 GPR75-ASB3A0A0A6YYF3 556 aa12.04□□□□□ -0.48
SMARCB1-206ENST00000477836 EYA2O00167 538 aa12.04□□□□□ -0.48
SMARCB1-206ENST00000477836 GDF11O95390 407 aa12.04□□□□□ -0.48
SMARCB1-206ENST00000477836 IGHA2P01877 340 aa12.04□□□□□ -0.48
SMARCB1-206ENST00000477836 FAAP100Q0VG06 881 aa12.04□□□□□ -0.48
SMARCB1-206ENST00000477836 ATP2B3Q16720 1220 aa12.04□□□□□ -0.48
SMARCB1-206ENST00000477836 SHROOM1Q2M3G4 852 aaPredicted RBP12.04□□□□□ -0.48
SMARCB1-206ENST00000477836 PRAMEF19Q5SWL8 479 aa12.04□□□□□ -0.48
SMARCB1-206ENST00000477836 KHSRPQ92945 711 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMARCB1-206ENST00000477836 NKX2-4Q9H2Z4 354 aa12.04□□□□□ -0.48
SMARCB1-206ENST00000477836 PHF24Q9UPV7 400 aa12.04□□□□□ -0.48
SMARCB1-206ENST00000477836 TIMP1P01033 207 aa12.03□□□□□ -0.48
SMARCB1-206ENST00000477836 RAB30Q15771 203 aa12.03□□□□□ -0.48
SMARCB1-206ENST00000477836 ZYXQ15942 572 aaKnown RBP12.03□□□□□ -0.48
SMARCB1-206ENST00000477836 TMEM240Q5SV17 173 aa12.03□□□□□ -0.48
SMARCB1-206ENST00000477836 OLFML2BQ68BL8 750 aa12.03□□□□□ -0.48
SMARCB1-206ENST00000477836 CCDC174Q6PII3 467 aa12.03□□□□□ -0.48
SMARCB1-206ENST00000477836 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
SMARCB1-206ENST00000477836 C16orf59Q7L2K0 433 aa12.03□□□□□ -0.48
SMARCB1-206ENST00000477836 SLC28A3Q9HAS3 691 aa12.03□□□□□ -0.48
SMARCB1-206ENST00000477836 FANCIQ9NVI1 1328 aa12.03□□□□□ -0.48
SMARCB1-206ENST00000477836 A0A1W2PQ45 241 aaPredicted RBP12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 A0A1W2PQY0 241 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 USP17L15C9J2P7 530 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 USP17L13C9JLJ4 530 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 USP17L11C9JVI0 530 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 USP17L18D6R9N7 530 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 USP17L22D6RA61 530 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 USP17L17D6RBQ6 530 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 USP17L19D6RCP7 530 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 USP17L20D6RJB6 530 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 SMIM22K7EJ46 135 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 ERC2O15083 957 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 ADORA2AP29274 412 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 MECOMQ03112 1051 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 EXOSC9Q06265 439 aaKnown RBP12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 USP17L24Q0WX57 530 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 PPIGQ13427 754 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 RASIP1Q5U651 963 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 SPTY2D1Q68D10 685 aaPredicted RBP12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 MFSD5Q6N075 450 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 ATG9AQ7Z3C6 839 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 WWC1Q8IX03 1113 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 XPNPEP3Q9NQH7 507 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 BTBD7Q9P203 1132 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 USP34Q70CQ2 3546 aa12.02□□□□□ -0.49
SMARCB1-206ENST00000477836 DCDC2CA8MYV0 355 aa12.01□□□□□ -0.49
SMARCB1-206ENST00000477836 ACRP10323 421 aa12.01□□□□□ -0.49
SMARCB1-206ENST00000477836 RASGRF1Q13972 1273 aa12.01□□□□□ -0.49
SMARCB1-206ENST00000477836 CCDC102BQ68D86 513 aa12.01□□□□□ -0.49
SMARCB1-206ENST00000477836 ERICH6Q7L0X2 663 aa12.01□□□□□ -0.49
SMARCB1-206ENST00000477836 RNF180Q86T96 592 aa12.01□□□□□ -0.49
SMARCB1-206ENST00000477836 HERVK_113Q902F9 699 aa12.01□□□□□ -0.49
SMARCB1-206ENST00000477836 SIL1Q9H173 461 aa12.01□□□□□ -0.49
SMARCB1-206ENST00000477836 ZBTB21Q9ULJ3 1066 aa12.01□□□□□ -0.49
SMARCB1-206ENST00000477836 LRRC37A2A6NM11 1700 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 SIPA1L1O43166 1804 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 GBF1Q92538 1859 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 APBB1O00213 710 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 TLL1O43897 1013 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 MAP4K4O95819 1239 aaPredicted RBP12□□□□□ -0.49
SMARCB1-206ENST00000477836 PGK1P00558 417 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 RARBP10826 455 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 ADORA1P30542 326 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 RFX5P48382 616 aaPredicted RBP12□□□□□ -0.49
SMARCB1-206ENST00000477836 CCDC27Q2M243 656 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms